Protein ID | Pro_DTO377G3_2|g8127.t1 |
Gene name | |
Location | scaffold_29:169184..172408 |
Strand | - |
Gene length (bp) | 3224 |
Transcript length (bp) | 2823 |
Coding sequence length (bp) | 2823 |
Protein length (aa) | 941 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13424 | TPR_12 | Tetratricopeptide repeat | 4.8E-08 | 689 | 742 |
PF13424 | TPR_12 | Tetratricopeptide repeat | 1.4E-10 | 711 | 776 |
PF00931 | NB-ARC | NB-ARC domain | 3.5E-16 | 263 | 443 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 5.9E-03 | 881 | 911 |
PF13374 | TPR_10 | Tetratricopeptide repeat | 2.3E-03 | 711 | 742 |
PF13374 | TPR_10 | Tetratricopeptide repeat | 1.8E-02 | 752 | 775 |
GO Term | Description | Terminal node |
---|---|---|
GO:0043531 | ADP binding | Yes |
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0036094 | small molecule binding | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0003674 | molecular_function | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043168 | anion binding | No |
GO:0000166 | nucleotide binding | No |
GO:0043167 | ion binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0017076 | purine nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g8127.t1 MGGETLQVKRSLLWERALKNYHQDLAGDKELVKILKTSSLEELLADIPILRPVNSSERPLPCTMDRLEPTFKLLN DFLEILRKSCGAESAQTALLASTTDKILQEVFDMIEELALTIPHLESCKITVSMTTDMETALLSLYQEFICFYAR TIRFFRNFRQPFMMRSSWPTLQGDFQRTIQRVKRLSNNIEREIELSRMRLDNQKYHVVLDFMARFKSQFPKNGDQ VSHHLPFVECSHFYGRDDILCQIDEALFVQPSARSLRSFALYGMGGVGKTQIALKYANASREKFDNIFWISAQNS ITIGQSFRNISKVLGLIELDTELDDHATILKVKDWLSSAKTSWLLIYDNLNDLSLIKHAWPAGYGGSVLVTSRDS SAALYPASSGCQVHAFDTDNGTAALLHLLGLDSESTSYQAEAKLITSELGGLPLALSQIGGFIAQRQMSLKSFLG FYDRNSTTVDAERPESMDCSQTLASVWEMALSGLSRNAKVLIMILSFLDLNGINETDLRNGTVLANDAAVRFMMD EIDFLDAQRDLLQRSLIDKSSESGVISMHRVVQRVVIRRMSDEERDKTFLLAIAIVSANFPDTYSADIGHQIASW NDCKKNLTHIESIVSKGTEFKIFEGENQPFAELLLRCSWYLYETENYSLARSYVDIALQKFVDKDSLAYASAVDL GGLIDVDICHPSAALEAFEKAYALRTSILPSDDLFLAASQVNLGLALTEIGEFEKALGYLQQSIDIRLMHNSDRI GNSYSNLASLLLRMGKPDDAEAILKSCPSLKDFSDETFLQTGNPRFSGDMVLLSRIRNAQGLHDEALKFACKALD FRRECSKERLKVCDSLYQVSVLRHKIGELELAQQLLQECIMISEALPHAEGLGHLARASYKISQVLADLGKPEES TFYLEKAIDIRGEFMKLDGDYVVVNGGASDFERLVPWMLW* |
Coding | >Pro_DTO377G3_2|g8127.t1 ATGGGGGGAGAGACCCTACAAGTGAAGCGTTCCCTTCTGTGGGAGAGGGCTCTGAAGAACTATCATCAAGATCTT GCCGGTGATAAGGAATTGGTCAAGATACTCAAGACTAGCAGCCTCGAGGAGCTTCTTGCGGATATCCCCATTCTA CGGCCAGTTAACTCGTCGGAAAGGCCACTGCCCTGCACTATGGATCGACTGGAGCCAACATTCAAACTGTTGAAT GATTTCTTAGAGATACTAAGAAAGTCATGCGGCGCGGAGTCGGCGCAAACAGCGCTACTGGCATCTACCACAGAC AAAATTTTGCAAGAAGTCTTCGATATGATTGAAGAGCTGGCCTTGACAATACCACATCTGGAGTCCTGCAAAATC ACTGTCTCAATGACCACGGATATGGAGACGGCACTGTTGAGTCTTTACCAAGAGTTTATCTGTTTCTATGCCCGC ACTATCCGTTTCTTTCGGAATTTCAGACAACCGTTTATGATGCGCAGCTCATGGCCCACCCTCCAGGGCGATTTT CAACGAACGATCCAACGAGTTAAGCGCCTATCTAACAATATCGAGCGCGAGATTGAGCTCAGTAGAATGCGACTC GATAACCAGAAATACCATGTGGTCCTCGATTTCATGGCGAGGTTCAAATCCCAGTTTCCGAAAAATGGCGATCAA GTTTCCCACCATCTTCCTTTCGTGGAATGCTCCCATTTCTATGGTAGAGATGATATTCTTTGCCAAATAGATGAA GCGCTATTTGTGCAACCCTCTGCCCGCTCACTTCGATCCTTCGCGTTATATGGCATGGGAGGAGTCGGAAAGACA CAGATCGCATTGAAGTACGCCAACGCATCGCGTGAAAAGTTCGATAATATTTTCTGGATTTCAGCCCAGAATTCG ATAACAATTGGGCAAAGCTTTCGAAATATTTCAAAGGTACTCGGTTTGATTGAACTAGACACAGAGCTGGACGAC CATGCCACCATTCTCAAAGTCAAGGACTGGCTATCATCCGCAAAGACCAGCTGGCTCCTTATATACGACAACCTT AATGACTTGAGCTTGATCAAGCATGCTTGGCCGGCAGGATATGGAGGGTCCGTCCTAGTTACCAGTCGAGACTCA AGTGCGGCCTTGTATCCCGCCTCGTCGGGATGTCAAGTACACGCTTTCGATACGGATAATGGGACCGCCGCATTG CTCCACCTACTCGGATTGGACTCGGAGTCTACATCTTATCAAGCCGAAGCTAAGCTAATCACTTCAGAGCTTGGA GGTCTGCCTCTGGCGCTGAGCCAGATTGGCGGATTTATCGCCCAACGGCAAATGTCCCTGAAGAGTTTTCTCGGC TTCTACGACCGAAATTCAACTACTGTCGATGCTGAGCGTCCAGAAAGTATGGATTGCAGTCAAACACTTGCAAGT GTGTGGGAAATGGCGCTGAGCGGCCTTTCCCGGAATGCTAAGGTCCTGATCATGATTCTATCATTCCTAGACCTC AATGGTATAAATGAGACAGATCTGAGAAACGGCACGGTTCTAGCAAATGACGCAGCCGTGAGGTTCATGATGGAT GAGATAGACTTTTTAGATGCCCAGAGAGACCTCCTCCAAAGGTCTCTCATAGACAAGTCCAGCGAAAGTGGAGTT ATTTCCATGCATCGGGTTGTTCAGCGTGTCGTCATCCGTCGAATGAGCGACGAAGAGCGAGACAAAACCTTTTTG CTCGCTATAGCCATCGTTTCCGCAAACTTCCCAGATACATACAGCGCAGATATCGGTCACCAGATTGCATCCTGG AACGATTGCAAGAAGAACCTGACCCACATTGAGAGCATTGTGAGCAAAGGGACTGAGTTCAAGATCTTTGAAGGG GAGAATCAACCGTTTGCGGAACTTCTGCTCCGCTGTTCCTGGTATCTGTATGAGACGGAGAATTACAGTCTCGCT CGTTCGTATGTCGACATCGCTCTGCAGAAATTTGTGGACAAAGATTCTCTTGCGTATGCCAGTGCAGTGGATCTT GGAGGTTTAATCGATGTTGACATTTGCCATCCATCGGCCGCGCTGGAGGCCTTCGAAAAAGCATACGCACTACGC ACATCAATTCTTCCGAGCGATGACTTGTTTCTGGCTGCCAGCCAGGTCAATTTAGGACTTGCTCTCACTGAGATT GGCGAGTTTGAAAAGGCTCTCGGCTATCTCCAACAGTCAATCGATATCCGGCTCATGCACAACAGTGACAGGATT GGTAACTCTTACAGTAACTTGGCCAGTTTACTGTTGAGAATGGGAAAGCCCGACGATGCCGAAGCTATACTGAAG AGCTGCCCATCATTGAAGGACTTTTCAGATGAGACATTTCTCCAAACCGGGAATCCTAGGTTCTCCGGAGATATG GTATTACTGAGCAGGATAAGGAACGCCCAAGGGCTTCATGACGAGGCACTCAAGTTTGCATGCAAGGCCTTAGAT TTCCGAAGGGAATGCTCCAAGGAGCGGCTCAAAGTCTGTGACTCGCTTTATCAAGTGTCGGTTCTTCGGCACAAA ATAGGCGAGTTGGAGCTTGCTCAACAACTACTTCAAGAGTGTATCATGATATCTGAAGCCCTTCCCCACGCCGAG GGCCTAGGACATCTCGCACGGGCAAGCTACAAGATATCGCAAGTTCTGGCAGACCTTGGAAAACCCGAGGAAAGT ACATTTTATCTTGAGAAGGCGATCGATATACGAGGAGAGTTCATGAAGTTGGATGGAGACTACGTTGTTGTGAAC GGAGGTGCCTCGGATTTCGAACGTCTGGTCCCCTGGATGCTGTGGTGA |
Transcript | >Pro_DTO377G3_2|g8127.t1 ATGGGGGGAGAGACCCTACAAGTGAAGCGTTCCCTTCTGTGGGAGAGGGCTCTGAAGAACTATCATCAAGATCTT GCCGGTGATAAGGAATTGGTCAAGATACTCAAGACTAGCAGCCTCGAGGAGCTTCTTGCGGATATCCCCATTCTA CGGCCAGTTAACTCGTCGGAAAGGCCACTGCCCTGCACTATGGATCGACTGGAGCCAACATTCAAACTGTTGAAT GATTTCTTAGAGATACTAAGAAAGTCATGCGGCGCGGAGTCGGCGCAAACAGCGCTACTGGCATCTACCACAGAC AAAATTTTGCAAGAAGTCTTCGATATGATTGAAGAGCTGGCCTTGACAATACCACATCTGGAGTCCTGCAAAATC ACTGTCTCAATGACCACGGATATGGAGACGGCACTGTTGAGTCTTTACCAAGAGTTTATCTGTTTCTATGCCCGC ACTATCCGTTTCTTTCGGAATTTCAGACAACCGTTTATGATGCGCAGCTCATGGCCCACCCTCCAGGGCGATTTT CAACGAACGATCCAACGAGTTAAGCGCCTATCTAACAATATCGAGCGCGAGATTGAGCTCAGTAGAATGCGACTC GATAACCAGAAATACCATGTGGTCCTCGATTTCATGGCGAGGTTCAAATCCCAGTTTCCGAAAAATGGCGATCAA GTTTCCCACCATCTTCCTTTCGTGGAATGCTCCCATTTCTATGGTAGAGATGATATTCTTTGCCAAATAGATGAA GCGCTATTTGTGCAACCCTCTGCCCGCTCACTTCGATCCTTCGCGTTATATGGCATGGGAGGAGTCGGAAAGACA CAGATCGCATTGAAGTACGCCAACGCATCGCGTGAAAAGTTCGATAATATTTTCTGGATTTCAGCCCAGAATTCG ATAACAATTGGGCAAAGCTTTCGAAATATTTCAAAGGTACTCGGTTTGATTGAACTAGACACAGAGCTGGACGAC CATGCCACCATTCTCAAAGTCAAGGACTGGCTATCATCCGCAAAGACCAGCTGGCTCCTTATATACGACAACCTT AATGACTTGAGCTTGATCAAGCATGCTTGGCCGGCAGGATATGGAGGGTCCGTCCTAGTTACCAGTCGAGACTCA AGTGCGGCCTTGTATCCCGCCTCGTCGGGATGTCAAGTACACGCTTTCGATACGGATAATGGGACCGCCGCATTG CTCCACCTACTCGGATTGGACTCGGAGTCTACATCTTATCAAGCCGAAGCTAAGCTAATCACTTCAGAGCTTGGA GGTCTGCCTCTGGCGCTGAGCCAGATTGGCGGATTTATCGCCCAACGGCAAATGTCCCTGAAGAGTTTTCTCGGC TTCTACGACCGAAATTCAACTACTGTCGATGCTGAGCGTCCAGAAAGTATGGATTGCAGTCAAACACTTGCAAGT GTGTGGGAAATGGCGCTGAGCGGCCTTTCCCGGAATGCTAAGGTCCTGATCATGATTCTATCATTCCTAGACCTC AATGGTATAAATGAGACAGATCTGAGAAACGGCACGGTTCTAGCAAATGACGCAGCCGTGAGGTTCATGATGGAT GAGATAGACTTTTTAGATGCCCAGAGAGACCTCCTCCAAAGGTCTCTCATAGACAAGTCCAGCGAAAGTGGAGTT ATTTCCATGCATCGGGTTGTTCAGCGTGTCGTCATCCGTCGAATGAGCGACGAAGAGCGAGACAAAACCTTTTTG CTCGCTATAGCCATCGTTTCCGCAAACTTCCCAGATACATACAGCGCAGATATCGGTCACCAGATTGCATCCTGG AACGATTGCAAGAAGAACCTGACCCACATTGAGAGCATTGTGAGCAAAGGGACTGAGTTCAAGATCTTTGAAGGG GAGAATCAACCGTTTGCGGAACTTCTGCTCCGCTGTTCCTGGTATCTGTATGAGACGGAGAATTACAGTCTCGCT CGTTCGTATGTCGACATCGCTCTGCAGAAATTTGTGGACAAAGATTCTCTTGCGTATGCCAGTGCAGTGGATCTT GGAGGTTTAATCGATGTTGACATTTGCCATCCATCGGCCGCGCTGGAGGCCTTCGAAAAAGCATACGCACTACGC ACATCAATTCTTCCGAGCGATGACTTGTTTCTGGCTGCCAGCCAGGTCAATTTAGGACTTGCTCTCACTGAGATT GGCGAGTTTGAAAAGGCTCTCGGCTATCTCCAACAGTCAATCGATATCCGGCTCATGCACAACAGTGACAGGATT GGTAACTCTTACAGTAACTTGGCCAGTTTACTGTTGAGAATGGGAAAGCCCGACGATGCCGAAGCTATACTGAAG AGCTGCCCATCATTGAAGGACTTTTCAGATGAGACATTTCTCCAAACCGGGAATCCTAGGTTCTCCGGAGATATG GTATTACTGAGCAGGATAAGGAACGCCCAAGGGCTTCATGACGAGGCACTCAAGTTTGCATGCAAGGCCTTAGAT TTCCGAAGGGAATGCTCCAAGGAGCGGCTCAAAGTCTGTGACTCGCTTTATCAAGTGTCGGTTCTTCGGCACAAA ATAGGCGAGTTGGAGCTTGCTCAACAACTACTTCAAGAGTGTATCATGATATCTGAAGCCCTTCCCCACGCCGAG GGCCTAGGACATCTCGCACGGGCAAGCTACAAGATATCGCAAGTTCTGGCAGACCTTGGAAAACCCGAGGAAAGT ACATTTTATCTTGAGAAGGCGATCGATATACGAGGAGAGTTCATGAAGTTGGATGGAGACTACGTTGTTGTGAAC GGAGGTGCCTCGGATTTCGAACGTCTGGTCCCCTGGATGCTGTGGTGA |
Gene | >Pro_DTO377G3_2|g8127.t1 ATGGGGGGAGAGACCCTACAAGTGAAGCGTTCCCTTCTGTGGGAGAGGGCTCTGAAGAACTATCATCAAGATCTT GCCGGTGATAAGGAATTGGTCAAGATACTCAAGACTAGCAGCCTCGAGGAGCTTCTTGCGGATATCCCCATTCTA CGGCCAGTTAACTCGTCGGAAAGGCCACTGCCCTGCACTATGGATCGACTGGAGCCAACATTCAAACTGTTGAAT GATTTCTTAGAGATACTAAGAAAGTCATGCGGCGCGGAGTCGGCGCAAACAGCGCTAGTATGGGGCAGTATACGA ATGATTGTCACGGTGGGCTTCCTTCATGAGAGCCTACACACTCTTATTTGAGGCTGACTAGTGTGCAGCTGGCAT CTACCACAGACAAAATTTTGCAAGAAGTCTTCGATATGATTGAAGAGCTGGCCTTGACAATACCACATCTGGAGT CCTGCAAAATCACTGTCTCAATGACCACGGATATGGAGACGGCACTGTTGAGTCTTTACCAAGAGTTTATCTGTT TCTATGCCCGCACTATCCGTTTCTTTCGGAATTTCAGACAACGTAAGTATTGCGTTCTCAGACTCAATCCGGTCT TCGTACTAATTTGAGCCAGCGTTTATGATGCGCAGCTCATGGCCCACCCTCCAGGGCGATTTTCAACGAACGATC CAACGAGTTAAGCGCCTATCTAACAATATCGAGCGCGAGATTGAGCTCAGTAGAATGCGACTCGATAACCAGAAA TACCATGTGGTCCTCGATTTCATGGCGAGGTTCAAATCCCAGTTTCCGAAAAATGGCGATCAAGTTTCCCACCAT CTTCCTTTCGTGGAATGCTCCCATTTCTATGGTAGAGATGATATTCTTTGCCAAATAGATGAAGCGCTATTTGTG CAACCCTCTGCCCGCTCACTTCGATCCTTCGCGTTATATGGCATGGGAGGAGTCGGAAAGACACAGATCGCATTG AAGTACGCCAACGCATCGCGTGAAAAGTTCGATAATATTTTCTGGATTTCAGCCCAGAATTCGATAACAATTGGG CAAAGCTTTCGAAATATTTCAAAGGTACTCGGTTTGATTGAACTAGACACAGAGCTGGACGACCATGCCACCATT CTCAAAGTCAAGGACTGGCTATCATCCGCAAGTAAGCTACGGACACCCAGCCCTGATGGGCCAAAATATTGAAAA CTAACGAACAAAAATATAGAGACCAGCTGGCTCCTTATATACGACAACCTTAATGACTTGAGCTTGATCAAGCAT GCTTGGCCGGCAGGATATGGAGGGTCCGTCCTAGTTACCAGTCGAGACTCAAGTGCGGCCTTGTATCCCGCCTCG TCGGGATGTCAAGTACACGCTTTCGATACGGATAATGGGACCGCCGCATTGCTCCACCTACTCGGATTGGACTCG GAGTCTACATCTTATCAAGCCGAAGCTAAGCTAATCACTTCAGAGCTTGGAGGTCTGCCTCTGGCGCTGAGCCAG ATTGGCGGATTTATCGCCCAACGGCAAATGTCCCTGAAGAGTTTTCTCGGCTTCTACGACCGAAATTCAACTACT GTCGATGCTGAGCGTCCAGAAAGTATGGATTGCAGTCAAACACTTGCAAGTGTGTGGGAAATGGCGCTGAGCGGC CTTTCCCGGAATGCTAAGGTCCTGATCATGATTCTATCATTCCTAGACCTCAATGGTATAAATGAGACAGATCTG AGAAACGGCACGGTTCTAGCAAATGACGCAGCCGTGAGGTTCATGATGGATGAGATAGAGTATGTACGTGGAATC CTCATGGATAACACTACTAACCTTACCGTTAGCTTTTTAGATGCCCAGAGAGACCTCCTCCAAAGGTCTCTCATA GACAAGTCCAGCGAAAGTGGAGTTATTTCCATGCATCGGGTTGTTCAGCGTGTCGTCATCCGTCGAATGAGCGAC GAAGAGCGAGACAAAACCTTTTTGCTCGCTATAGCCATCGTTTCCGCAAACTTCCCAGATACATACAGCGCAGAT ATCGGTCACCAGATTGCATCCTGGAACGATTGCAAGAAGAACCTGACCCACATTGAGAGCATTGTGAGCAAAGGG ACTGAGTTCAAGATCTTTGAAGGGGAGAATCAACCGTTTGCGGAACTTCTGCTCCGCTGTTCCTGGTATGTTTCA ATATTATAATCTCAAACATTAATTCTCTAACCAAAGACAGGTATCTGTATGAGACGGAGAATTACAGTCTCGCTC GTTCGTATGTCGACATCGCTCTGCAGAAATTTGTGGACAAAGATTCTCTTGCGTATGCCAGTGCAGTGGATCTTG GAGGTTTAATCGATGTTGACATTTGCCATCCATCGGCCGCGCTGGAGGCCTTCGAAAAAGCATACGCACTACGCA CATCAATTCTTCCGAGCGATGACTTGTTTCTGGCTGCCAGCCAGGTCAATTTAGGACTTGCTCTCACTGAGATTG GCGAGTTTGAAAAGGCTCTCGGCTATCTCCAACAGTCAATCGATATCCGGCTCATGCACAACAGTGACAGGATTG GTAACTCTTACAGTAACTTGGCCAGTTTACTGTTGAGAATGGGAAAGCCCGACGATGCCGAAGCTATACTGAAGA GCTGCCCATCATTGAAGGACTTTTCAGATGAGACATTTCTCCAAACCGGGAATCCTAGGTTCTCCGGGTAAGTTC TCCTGTGAAGGCCCGAAATATATGACTAACATCATGCAGAGATATGGTATTACTGAGCAGGATAAGGAACGCCCA AGGGCTTCATGACGAGGCACTCAAGTTTGCATGCAAGGCCTTAGATTTCCGAAGGGAATGCTCCAAGGAGCGGCT CAAAGTCTGTGACTCGCTTTATCAAGTGTCGGTTCTTCGGCACAAAATAGGCGAGTTGGAGCTTGCTCAGTAAGT ACAAGCCAATACACAGCAAATGACTATAAATGCTGACATATTTCCTCAGACAACTACTTCAAGAGTGTATCATGA TATCTGAAGCCCTTCCCCACGCCGAGGGCCTAGGACATCTCGCACGGGCAAGCTACAAGATATCGCAAGTTCTGG CAGACCTTGGAAAACCCGAGGAAAGTACATTTTATCTTGAGAAGGCGATCGATATACGAGGAGAGTTCATGAAGT TGGATGGAGACTACGTTGTTGTGAACGGAGGTGCCTCGGATTTCGAACGTCTGGTCCCCTGGATGCTGTGGTGA |