© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g8117.t1 |
| Gene name | |
| Location | scaffold_29:145716..146952 |
| Strand | - |
| Gene length (bp) | 1236 |
| Transcript length (bp) | 1005 |
| Coding sequence length (bp) | 1005 |
| Protein length (aa) | 335 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 1.7E-11 | 4 | 236 |
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 1.7E-11 | 8 | 109 |
| PF01118 | Semialdhyde_dh | Semialdehyde dehydrogenase, NAD binding domain | 6.0E-09 | 5 | 84 |
| PF05368 | NmrA | NmrA-like family | 2.2E-08 | 4 | 90 |
| PF02719 | Polysacc_synt_2 | Polysaccharide biosynthesis protein | 1.4E-04 | 4 | 86 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Yes |
| GO:0051287 | NAD binding | Yes |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | No |
| GO:0000166 | nucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0036094 | small molecule binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8117.t1 MTQIFLTGATGYIGGEVLHALQHAHPDYEVAALIRDEEKAGKVLAAFPKVRVVLADLDNVEIIEKESRKADIVIH AASNKHLESVKAIANGLAGRQNAYYIQVTGASVLSGPEVDSNSYGEPSDQIVDDLDNAADLRDIIRAYKDRRVVD NYILDLGSGGPKTAILFPPIIFGTGNGPVNQRSIQVPSLARAALLQHVGLYLGRGLSRWGIVHIADLADLFVKLV EHAVNATPSPIWNGNGLFFVENGFESFKDVALVIAKEAHSLGYIDSPDSVQSMNLDEANVVIPNGAVFLGTNGQG RASRARKLLGWQPDGESFQSATRETIITEAAQLR* |
| Coding | >Pro_DTO377G3_2|g8117.t1 ATGACTCAAATCTTCCTTACCGGTGCAACGGGCTACATTGGGGGCGAAGTCCTCCACGCTTTACAGCATGCGCAT CCTGATTACGAGGTTGCCGCCTTGATCAGAGATGAGGAAAAGGCCGGCAAAGTTTTGGCTGCATTTCCTAAGGTC CGTGTAGTTCTTGCGGATTTGGACAATGTGGAAATCATTGAGAAAGAATCACGCAAAGCCGATATTGTCATCCAC GCTGCTAGTAACAAGCATCTCGAAAGCGTGAAAGCGATCGCAAATGGCCTGGCCGGACGTCAAAATGCCTATTAC ATCCAAGTTACCGGGGCTAGCGTTCTGTCAGGTCCTGAAGTTGATAGCAACTCATATGGTGAGCCCTCGGATCAA ATCGTTGATGATTTGGATAACGCTGCCGATCTCCGAGACATAATTCGGGCGTACAAAGATCGTCGGGTGGTGGAT AACTACATTCTCGACTTGGGATCAGGTGGTCCCAAAACCGCCATTCTTTTCCCTCCTATCATATTCGGCACTGGT AACGGTCCCGTGAATCAACGTAGCATCCAGGTTCCCTCATTGGCCCGGGCCGCTTTGCTACAACATGTTGGTCTA TACCTTGGCAGAGGACTAAGTCGATGGGGCATTGTTCACATCGCTGATCTGGCGGATCTCTTTGTCAAATTGGTG GAGCATGCTGTCAACGCCACTCCCAGTCCTATCTGGAATGGGAACGGCCTTTTCTTTGTGGAAAACGGTTTCGAG AGCTTCAAAGATGTCGCTTTGGTGATCGCCAAAGAGGCGCATAGCCTCGGTTACATTGATTCGCCTGATTCAGTG CAATCCATGAATCTCGATGAGGCCAATGTAGTTATACCCAATGGAGCTGTGTTCCTGGGTACCAATGGTCAAGGC CGAGCTTCACGGGCAAGAAAGCTGTTAGGATGGCAACCAGATGGCGAGAGCTTCCAAAGCGCCACGCGGGAGACA ATCATCACTGAAGCAGCACAGCTGCGATGA |
| Transcript | >Pro_DTO377G3_2|g8117.t1 ATGACTCAAATCTTCCTTACCGGTGCAACGGGCTACATTGGGGGCGAAGTCCTCCACGCTTTACAGCATGCGCAT CCTGATTACGAGGTTGCCGCCTTGATCAGAGATGAGGAAAAGGCCGGCAAAGTTTTGGCTGCATTTCCTAAGGTC CGTGTAGTTCTTGCGGATTTGGACAATGTGGAAATCATTGAGAAAGAATCACGCAAAGCCGATATTGTCATCCAC GCTGCTAGTAACAAGCATCTCGAAAGCGTGAAAGCGATCGCAAATGGCCTGGCCGGACGTCAAAATGCCTATTAC ATCCAAGTTACCGGGGCTAGCGTTCTGTCAGGTCCTGAAGTTGATAGCAACTCATATGGTGAGCCCTCGGATCAA ATCGTTGATGATTTGGATAACGCTGCCGATCTCCGAGACATAATTCGGGCGTACAAAGATCGTCGGGTGGTGGAT AACTACATTCTCGACTTGGGATCAGGTGGTCCCAAAACCGCCATTCTTTTCCCTCCTATCATATTCGGCACTGGT AACGGTCCCGTGAATCAACGTAGCATCCAGGTTCCCTCATTGGCCCGGGCCGCTTTGCTACAACATGTTGGTCTA TACCTTGGCAGAGGACTAAGTCGATGGGGCATTGTTCACATCGCTGATCTGGCGGATCTCTTTGTCAAATTGGTG GAGCATGCTGTCAACGCCACTCCCAGTCCTATCTGGAATGGGAACGGCCTTTTCTTTGTGGAAAACGGTTTCGAG AGCTTCAAAGATGTCGCTTTGGTGATCGCCAAAGAGGCGCATAGCCTCGGTTACATTGATTCGCCTGATTCAGTG CAATCCATGAATCTCGATGAGGCCAATGTAGTTATACCCAATGGAGCTGTGTTCCTGGGTACCAATGGTCAAGGC CGAGCTTCACGGGCAAGAAAGCTGTTAGGATGGCAACCAGATGGCGAGAGCTTCCAAAGCGCCACGCGGGAGACA ATCATCACTGAAGCAGCACAGCTGCGATGA |
| Gene | >Pro_DTO377G3_2|g8117.t1 ATGACTCAAATCTTCCTGTGAGTGGCTTTATTCCTGATAAAGCATGATCCATGCTTTGCTAACTCAAATTCTAGT ACCGGTGCAACGGGCTACATTGGGGGCGAAGTCCTCCACGCTTTACAGCATGCGCATCCTGATTACGAGGTTGCC GCCTTGATCAGAGATGAGGAAAAGGCCGGCAAAGTTTTGGCTGCATTTCCTAAGGTCCGTGTAGTTCTTGCGGAT TTGGACAATGTGGAAATCATTGAGAAAGAATCACGCAAAGCCGATATTGTCATCCGTGGGTCAATTTACATCTGG TAGCCTGATGTATCACTAACCTTCTCCATTTAGACGCTGCTAGTAACAAGCATCTCGAAAGCGTGAAAGCGATCG CAAATGGCCTGGCCGGACGTCAAAATGGTATGTCGTCTACTGCTTCAATATCTTCTTTCGGGTTTGATCGTTAAT TGAAGTAAAATGCAGCCTATTACATCCAAGTTACCGGGGCTAGCGTTCTGTCAGGTCCTGAAGTTGATAGCAACT CATATGGTGAGCCCTCGGATCAAATCGTTGATGATTTGGATAACGCTGCCGATCTCCGAGACATAATTCGGGCGT ACAAAGATCGTCGGGTGGTGGATAACTACATTCTCGACTTGGGATCAGGTGGTCCCAAAACCGCCATTCTTTTCC CTCCTATCATATTCGGCACTGGTAACGGTCCCGTGAATCAACGTAGCATCCAGGTTCCCTCATTGGCCCGGGCCG CTTTGCTACAACATGTTGGTCTATACCTTGGCAGAGGACTAAGTCGATGGGGCATTGTTCACATCGCTGATCTGG CGGATCTCTTTGTCAAATTGGTGGAGCATGCTGTCAACGCCACTCCCAGTCCTATCTGGAATGGGAACGGCCTTT TCTTTGTGGAAAACGGTTTCGAGGTTAGTTCATGGCCTAATATGTCACTTCTCCGCGCTAACCTTCTTGTTTTTC TTTCAGAGCTTCAAAGATGTCGCTTTGGTGATCGCCAAAGAGGCGCATAGCCTCGGTTACATTGATTCGCCTGAT TCAGTGCAATCCATGAATCTCGATGAGGCCAATGTAGTTATACCCAATGGAGCTGTGTTCCTGGGTACCAATGGT CAAGGCCGAGCTTCACGGGCAAGAAAGCTGTTAGGATGGCAACCAGATGGCGAGAGCTTCCAAAGCGCCACGCGG GAGACAATCATCACTGAAGCAGCACAGCTGCGATGA |