Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8113.t1
Gene name
Locationscaffold_29:135698..136802
Strand+
Gene length (bp)1104
Transcript length (bp)1104
Coding sequence length (bp)1104
Protein length (aa) 368

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00096 zf-C2H2 Zinc finger, C2H2 type 6.7E-04 19 41
PF00096 zf-C2H2 Zinc finger, C2H2 type 1.8E-03 48 71

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8113.t1
MKGARPATEEIRQDLPRPYKCPLCDRAFHRLEHQTRHIRTHTGEKPHACQFPGCTKRFSRSDELTRHSRIHNNPN
SRRSNKAQHLAAAAAAAGQDSGMNASNMMPPPSKPITRSAPVSQVGSPDVSPPHSFSNYANHMRSNLGPYSRTAE
RASSGMDINLLATAASQVERDDHMGFHGSRGHQIFGSRHHGTSRGLPSLSAYAISQNMTRSHSNDDDDGYGHRVK
RSRPNSPNSTAPSSPTFSHDSLSPTPDHTPLATPAHSPRLRPLGASELHLPSIRHLSLQHTPALAPMEPQPEGPN
YYSPNQGHMGPTISDIMSKPDGTQRKLPVPQIPKVAVQDMLNPAAGFSSMNSSATNSVAGGDLADRF*
Coding >Pro_DTO377G3_2|g8113.t1
ATGAAGGGGGCGCGCCCCGCGACCGAGGAGATCCGCCAGGACCTGCCCCGGCCGTACAAGTGTCCCCTTTGCGAC
CGTGCGTTCCACCGCCTGGAGCACCAGACGAGACACATCCGCACGCACACCGGCGAGAAGCCACACGCCTGCCAG
TTCCCCGGCTGCACGAAACGCTTCAGTCGATCAGACGAGCTAACTCGCCATTCGCGCATCCACAACAACCCCAAC
TCGCGCCGCAGTAACAAGGCTCAGCACCTGGCGGCGGCCGCGGCGGCCGCAGGCCAAGACTCCGGAATGAATGCT
TCCAACATGATGCCACCTCCTAGCAAGCCTATCACTCGCTCCGCGCCAGTATCGCAGGTCGGATCTCCGGATGTC
TCCCCTCCCCACTCCTTCTCCAACTACGCCAACCACATGCGCTCGAATTTGGGCCCTTACTCCCGCACCGCGGAG
CGTGCTTCCTCCGGAATGGATATCAATCTCCTGGCTACAGCGGCGTCGCAAGTAGAGCGTGATGACCACATGGGC
TTCCACGGCTCGCGGGGACACCAGATTTTCGGCTCCCGTCATCACGGCACTAGCCGTGGCCTCCCTTCGCTCTCC
GCATATGCGATTTCGCAGAACATGACCCGTTCGCATTCCAACGATGACGATGATGGCTATGGCCACCGTGTCAAG
CGCTCTCGTCCCAACTCTCCCAACTCCACCGCTCCTTCTTCTCCTACCTTCTCCCACGATTCTCTCTCCCCTACC
CCTGATCACACTCCATTGGCTACTCCTGCACACTCGCCCCGTCTGCGCCCTCTTGGTGCCAGCGAGCTGCATCTG
CCTTCGATTCGCCACCTGTCTCTCCAGCACACCCCTGCTCTCGCGCCCATGGAGCCGCAACCAGAAGGGCCCAAT
TATTACAGCCCCAACCAGGGGCACATGGGCCCAACCATCTCCGATATCATGTCGAAACCCGACGGCACACAGCGC
AAGTTGCCCGTGCCCCAGATTCCCAAGGTTGCGGTGCAGGACATGCTCAACCCCGCGGCCGGATTTTCTTCCATG
AACTCGTCAGCCACCAATTCCGTTGCTGGCGGGGACCTGGCAGACCGGTTCTAA
Transcript >Pro_DTO377G3_2|g8113.t1
ATGAAGGGGGCGCGCCCCGCGACCGAGGAGATCCGCCAGGACCTGCCCCGGCCGTACAAGTGTCCCCTTTGCGAC
CGTGCGTTCCACCGCCTGGAGCACCAGACGAGACACATCCGCACGCACACCGGCGAGAAGCCACACGCCTGCCAG
TTCCCCGGCTGCACGAAACGCTTCAGTCGATCAGACGAGCTAACTCGCCATTCGCGCATCCACAACAACCCCAAC
TCGCGCCGCAGTAACAAGGCTCAGCACCTGGCGGCGGCCGCGGCGGCCGCAGGCCAAGACTCCGGAATGAATGCT
TCCAACATGATGCCACCTCCTAGCAAGCCTATCACTCGCTCCGCGCCAGTATCGCAGGTCGGATCTCCGGATGTC
TCCCCTCCCCACTCCTTCTCCAACTACGCCAACCACATGCGCTCGAATTTGGGCCCTTACTCCCGCACCGCGGAG
CGTGCTTCCTCCGGAATGGATATCAATCTCCTGGCTACAGCGGCGTCGCAAGTAGAGCGTGATGACCACATGGGC
TTCCACGGCTCGCGGGGACACCAGATTTTCGGCTCCCGTCATCACGGCACTAGCCGTGGCCTCCCTTCGCTCTCC
GCATATGCGATTTCGCAGAACATGACCCGTTCGCATTCCAACGATGACGATGATGGCTATGGCCACCGTGTCAAG
CGCTCTCGTCCCAACTCTCCCAACTCCACCGCTCCTTCTTCTCCTACCTTCTCCCACGATTCTCTCTCCCCTACC
CCTGATCACACTCCATTGGCTACTCCTGCACACTCGCCCCGTCTGCGCCCTCTTGGTGCCAGCGAGCTGCATCTG
CCTTCGATTCGCCACCTGTCTCTCCAGCACACCCCTGCTCTCGCGCCCATGGAGCCGCAACCAGAAGGGCCCAAT
TATTACAGCCCCAACCAGGGGCACATGGGCCCAACCATCTCCGATATCATGTCGAAACCCGACGGCACACAGCGC
AAGTTGCCCGTGCCCCAGATTCCCAAGGTTGCGGTGCAGGACATGCTCAACCCCGCGGCCGGATTTTCTTCCATG
AACTCGTCAGCCACCAATTCCGTTGCTGGCGGGGACCTGGCAGACCGGTTCTAA
Gene >Pro_DTO377G3_2|g8113.t1
ATGAAGGGGGCGCGCCCCGCGACCGAGGAGATCCGCCAGGACCTGCCCCGGCCGTACAAGTGTCCCCTTTGCGAC
CGTGCGTTCCACCGCCTGGAGCACCAGACGAGACACATCCGCACGCACACCGGCGAGAAGCCACACGCCTGCCAG
TTCCCCGGCTGCACGAAACGCTTCAGTCGATCAGACGAGCTAACTCGCCATTCGCGCATCCACAACAACCCCAAC
TCGCGCCGCAGTAACAAGGCTCAGCACCTGGCGGCGGCCGCGGCGGCCGCAGGCCAAGACTCCGGAATGAATGCT
TCCAACATGATGCCACCTCCTAGCAAGCCTATCACTCGCTCCGCGCCAGTATCGCAGGTCGGATCTCCGGATGTC
TCCCCTCCCCACTCCTTCTCCAACTACGCCAACCACATGCGCTCGAATTTGGGCCCTTACTCCCGCACCGCGGAG
CGTGCTTCCTCCGGAATGGATATCAATCTCCTGGCTACAGCGGCGTCGCAAGTAGAGCGTGATGACCACATGGGC
TTCCACGGCTCGCGGGGACACCAGATTTTCGGCTCCCGTCATCACGGCACTAGCCGTGGCCTCCCTTCGCTCTCC
GCATATGCGATTTCGCAGAACATGACCCGTTCGCATTCCAACGATGACGATGATGGCTATGGCCACCGTGTCAAG
CGCTCTCGTCCCAACTCTCCCAACTCCACCGCTCCTTCTTCTCCTACCTTCTCCCACGATTCTCTCTCCCCTACC
CCTGATCACACTCCATTGGCTACTCCTGCACACTCGCCCCGTCTGCGCCCTCTTGGTGCCAGCGAGCTGCATCTG
CCTTCGATTCGCCACCTGTCTCTCCAGCACACCCCTGCTCTCGCGCCCATGGAGCCGCAACCAGAAGGGCCCAAT
TATTACAGCCCCAACCAGGGGCACATGGGCCCAACCATCTCCGATATCATGTCGAAACCCGACGGCACACAGCGC
AAGTTGCCCGTGCCCCAGATTCCCAAGGTTGCGGTGCAGGACATGCTCAACCCCGCGGCCGGATTTTCTTCCATG
AACTCGTCAGCCACCAATTCCGTTGCTGGCGGGGACCTGGCAGACCGGTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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