Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8103.t1
Gene name
Locationscaffold_29:100717..101405
Strand+
Gene length (bp)688
Transcript length (bp)639
Coding sequence length (bp)639
Protein length (aa) 213

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13023 HD_3 HD domain 8.1E-49 35 192
PF12917 YfbR-like 5'-deoxynucleotidase YfbR-like 4.8E-11 31 191

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8103.t1
MASDAPEWSPETVLSTLPYRPEENSTSPVPFFHLIERLKTTKREGWRRFGINGESISDHMYRMSIMTMMAPPSLA
TKINIPHCTKMALIHDMAEALVGDITPVDYHIPKAEKARREASVMEYIATTLLDKVPGGAFSGGKIKEIFEEYEK
DETLEAHFVHDIDKMELLLQMVEYERSDKVDLTEFTHVASRIRLPEIQAWAAEVIQERPKKA*
Coding >Pro_DTO377G3_2|g8103.t1
ATGGCGTCCGACGCTCCTGAATGGAGCCCCGAGACCGTGCTCTCTACCCTCCCCTACCGTCCAGAAGAGAACTCT
ACCTCACCCGTCCCCTTCTTCCACTTGATTGAGCGCCTCAAGACCACCAAGCGCGAGGGCTGGCGCCGCTTCGGT
ATCAATGGAGAGTCCATCTCCGACCATATGTATCGCATGTCGATCATGACCATGATGGCCCCGCCGTCCCTGGCA
ACCAAGATAAACATCCCGCACTGCACAAAGATGGCCTTGATCCACGACATGGCCGAGGCGCTTGTCGGCGATATC
ACTCCAGTCGACTACCACATCCCCAAGGCCGAGAAGGCTCGCCGCGAGGCCTCCGTTATGGAATACATCGCTACT
ACCCTCCTCGACAAGGTCCCCGGAGGCGCCTTCTCGGGCGGGAAAATCAAGGAAATCTTTGAGGAATACGAGAAG
GATGAGACTCTTGAGGCCCACTTCGTGCATGACATCGACAAGATGGAGCTCCTGTTGCAAATGGTTGAGTATGAG
CGTTCGGACAAGGTTGATCTCACCGAATTCACCCACGTCGCCTCGCGCATTCGGTTGCCCGAGATTCAGGCCTGG
GCTGCGGAGGTCATTCAGGAAAGGCCGAAGAAGGCATAA
Transcript >Pro_DTO377G3_2|g8103.t1
ATGGCGTCCGACGCTCCTGAATGGAGCCCCGAGACCGTGCTCTCTACCCTCCCCTACCGTCCAGAAGAGAACTCT
ACCTCACCCGTCCCCTTCTTCCACTTGATTGAGCGCCTCAAGACCACCAAGCGCGAGGGCTGGCGCCGCTTCGGT
ATCAATGGAGAGTCCATCTCCGACCATATGTATCGCATGTCGATCATGACCATGATGGCCCCGCCGTCCCTGGCA
ACCAAGATAAACATCCCGCACTGCACAAAGATGGCCTTGATCCACGACATGGCCGAGGCGCTTGTCGGCGATATC
ACTCCAGTCGACTACCACATCCCCAAGGCCGAGAAGGCTCGCCGCGAGGCCTCCGTTATGGAATACATCGCTACT
ACCCTCCTCGACAAGGTCCCCGGAGGCGCCTTCTCGGGCGGGAAAATCAAGGAAATCTTTGAGGAATACGAGAAG
GATGAGACTCTTGAGGCCCACTTCGTGCATGACATCGACAAGATGGAGCTCCTGTTGCAAATGGTTGAGTATGAG
CGTTCGGACAAGGTTGATCTCACCGAATTCACCCACGTCGCCTCGCGCATTCGGTTGCCCGAGATTCAGGCCTGG
GCTGCGGAGGTCATTCAGGAAAGGCCGAAGAAGGCATAA
Gene >Pro_DTO377G3_2|g8103.t1
ATGGCGTCCGACGCTCCTGAATGGAGCCCCGAGACCGGTAAGCCTCTAACTCCTCTTTTCAGACTATGCAAAGCT
AATATCCGTAGTGCTCTCTACCCTCCCCTACCGTCCAGAAGAGAACTCTACCTCACCCGTCCCCTTCTTCCACTT
GATTGAGCGCCTCAAGACCACCAAGCGCGAGGGCTGGCGCCGCTTCGGTATCAATGGAGAGTCCATCTCCGACCA
TATGTATCGCATGTCGATCATGACCATGATGGCCCCGCCGTCCCTGGCAACCAAGATAAACATCCCGCACTGCAC
AAAGATGGCCTTGATCCACGACATGGCCGAGGCGCTTGTCGGCGATATCACTCCAGTCGACTACCACATCCCCAA
GGCCGAGAAGGCTCGCCGCGAGGCCTCCGTTATGGAATACATCGCTACTACCCTCCTCGACAAGGTCCCCGGAGG
CGCCTTCTCGGGCGGGAAAATCAAGGAAATCTTTGAGGAATACGAGAAGGATGAGACTCTTGAGGCCCACTTCGT
GCATGACATCGACAAGATGGAGCTCCTGTTGCAAATGGTTGAGTATGAGCGTTCGGACAAGGTTGATCTCACCGA
ATTCACCCACGTCGCCTCGCGCATTCGGTTGCCCGAGATTCAGGCCTGGGCTGCGGAGGTCATTCAGGAAAGGCC
GAAGAAGGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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