© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g8089.t1 |
| Gene name | |
| Location | scaffold_29:61237..63772 |
| Strand | + |
| Gene length (bp) | 2535 |
| Transcript length (bp) | 1557 |
| Coding sequence length (bp) | 1557 |
| Protein length (aa) | 519 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.3E-53 | 28 | 469 |
| PF00324 | AA_permease | Amino acid permease | 4.0E-14 | 38 | 476 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 29 | 51 | 22 |
| 2 | 61 | 83 | 22 |
| 3 | 95 | 114 | 19 |
| 4 | 119 | 141 | 22 |
| 5 | 153 | 175 | 22 |
| 6 | 180 | 202 | 22 |
| 7 | 223 | 245 | 22 |
| 8 | 260 | 282 | 22 |
| 9 | 309 | 331 | 22 |
| 10 | 361 | 383 | 22 |
| 11 | 390 | 412 | 22 |
| 12 | 427 | 449 | 22 |
| 13 | 461 | 480 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8089.t1 MKDDSLQGDDAKLAALGHKPELQRSHSTWSMLGLAFAVLNSWTALSASLSISLTSGGSTSVIWGLVTAGFCNLCI ACSLAEFLSAYPTAGGQYHWVAVAWPSTVPILSWVTGWINVAGWVALVATNSLLSSQLIVGIISVLHESYVPQRW HQFLIYVGLTVGSFIINAFMNSILPLIYRGAFMWSIGGFVIVSITCLACASPNYNTAYFVFCDFVNTTGWPDGVA WLLGLLQGGLGVTAFDAVAHMIEEVPNADIEGPKIMVTCVGIGVFTGCIFLIVLLFVAGNMQTVASSAAGPLLQI LIDATKSNAGGICLLMLPLVCLVFAIISVMTTSSRMIFAFARDGGLPASRFFAKVHPTLKLPLNALILSVVVVIA FGCIFLGSSSAFNAIISASVVALDLSYGIPIAINCLQGRKSLPERKWKLPNAVGWFVDIVALSYIALTTVLFVFP PSSTVTGSSMNYCIAAFAVIIIISVFQWFVDGRKNFTGPRADILDALDTVPTIEEVQPMHEKELAGRA* |
| Coding | >Pro_DTO377G3_2|g8089.t1 ATGAAGGACGATTCACTCCAAGGCGATGATGCCAAGTTGGCGGCTTTGGGCCATAAGCCTGAACTCCAACGTAGT CATTCGACATGGTCGATGCTTGGTCTGGCCTTTGCGGTTCTTAATTCGTGGACTGCGCTTTCGGCCAGTTTGTCG ATCAGTCTTACATCTGGTGGAAGTACCAGTGTGATTTGGGGACTGGTTACTGCAGGATTCTGCAATCTTTGTATC GCATGTTCGTTGGCTGAATTTCTTTCGGCATATCCTACAGCCGGTGGACAATATCATTGGGTAGCAGTCGCGTGG CCGAGCACAGTCCCAATCCTATCATGGGTTACAGGCTGGATCAATGTGGCAGGCTGGGTTGCACTCGTCGCTACG AACTCCCTTCTCTCCAGTCAACTTATTGTCGGCATCATCTCGGTTCTTCATGAGAGCTATGTCCCACAACGCTGG CATCAATTCCTCATCTACGTTGGATTGACCGTCGGTTCCTTCATCATCAATGCCTTCATGAACTCCATCTTGCCG CTCATTTACCGCGGTGCTTTCATGTGGTCGATTGGAGGGTTTGTGATTGTGTCAATTACATGTCTCGCATGCGCT TCTCCCAACTACAACACAGCTTACTTCGTGTTCTGTGACTTTGTCAATACAACCGGCTGGCCTGATGGAGTCGCA TGGCTTCTAGGTTTGCTTCAAGGAGGGCTTGGCGTTACTGCCTTTGATGCTGTGGCACACATGATCGAAGAGGTG CCCAATGCCGACATCGAGGGACCGAAAATCATGGTTACCTGCGTGGGTATCGGAGTCTTCACCGGTTGTATCTTT TTGATCGTCCTTCTATTCGTCGCAGGAAACATGCAAACGGTCGCATCCTCCGCAGCCGGTCCTCTTCTGCAGATC CTCATCGATGCGACCAAGAGCAACGCGGGTGGTATCTGCCTTTTGATGTTGCCCCTGGTCTGCTTGGTCTTTGCT ATAATCAGCGTCATGACCACCAGTAGCCGAATGATCTTTGCATTTGCAAGAGATGGAGGCCTTCCTGCCTCTCGG TTCTTTGCAAAGGTCCACCCAACACTCAAATTGCCCCTCAACGCACTCATTCTTAGTGTTGTTGTGGTCATTGCA TTCGGATGCATCTTCCTCGGCTCTTCAAGTGCGTTCAACGCAATTATCTCTGCCTCGGTCGTGGCTCTTGACCTG TCCTACGGAATCCCTATTGCCATCAACTGTCTTCAGGGGCGCAAATCGCTCCCGGAAAGAAAATGGAAATTGCCT AATGCAGTTGGATGGTTTGTCGACATTGTCGCTTTATCATATATCGCTTTGACTACCGTCCTTTTCGTCTTCCCT CCGTCAAGCACGGTCACGGGAAGCAGTATGAACTACTGCATTGCAGCATTTGCTGTTATTATCATCATCTCCGTG TTCCAGTGGTTTGTGGATGGAAGAAAGAACTTCACCGGTCCTCGCGCTGACATCCTCGACGCATTGGATACTGTG CCTACGATAGAGGAGGTCCAGCCCATGCACGAAAAGGAACTTGCTGGTCGGGCTTAG |
| Transcript | >Pro_DTO377G3_2|g8089.t1 ATGAAGGACGATTCACTCCAAGGCGATGATGCCAAGTTGGCGGCTTTGGGCCATAAGCCTGAACTCCAACGTAGT CATTCGACATGGTCGATGCTTGGTCTGGCCTTTGCGGTTCTTAATTCGTGGACTGCGCTTTCGGCCAGTTTGTCG ATCAGTCTTACATCTGGTGGAAGTACCAGTGTGATTTGGGGACTGGTTACTGCAGGATTCTGCAATCTTTGTATC GCATGTTCGTTGGCTGAATTTCTTTCGGCATATCCTACAGCCGGTGGACAATATCATTGGGTAGCAGTCGCGTGG CCGAGCACAGTCCCAATCCTATCATGGGTTACAGGCTGGATCAATGTGGCAGGCTGGGTTGCACTCGTCGCTACG AACTCCCTTCTCTCCAGTCAACTTATTGTCGGCATCATCTCGGTTCTTCATGAGAGCTATGTCCCACAACGCTGG CATCAATTCCTCATCTACGTTGGATTGACCGTCGGTTCCTTCATCATCAATGCCTTCATGAACTCCATCTTGCCG CTCATTTACCGCGGTGCTTTCATGTGGTCGATTGGAGGGTTTGTGATTGTGTCAATTACATGTCTCGCATGCGCT TCTCCCAACTACAACACAGCTTACTTCGTGTTCTGTGACTTTGTCAATACAACCGGCTGGCCTGATGGAGTCGCA TGGCTTCTAGGTTTGCTTCAAGGAGGGCTTGGCGTTACTGCCTTTGATGCTGTGGCACACATGATCGAAGAGGTG CCCAATGCCGACATCGAGGGACCGAAAATCATGGTTACCTGCGTGGGTATCGGAGTCTTCACCGGTTGTATCTTT TTGATCGTCCTTCTATTCGTCGCAGGAAACATGCAAACGGTCGCATCCTCCGCAGCCGGTCCTCTTCTGCAGATC CTCATCGATGCGACCAAGAGCAACGCGGGTGGTATCTGCCTTTTGATGTTGCCCCTGGTCTGCTTGGTCTTTGCT ATAATCAGCGTCATGACCACCAGTAGCCGAATGATCTTTGCATTTGCAAGAGATGGAGGCCTTCCTGCCTCTCGG TTCTTTGCAAAGGTCCACCCAACACTCAAATTGCCCCTCAACGCACTCATTCTTAGTGTTGTTGTGGTCATTGCA TTCGGATGCATCTTCCTCGGCTCTTCAAGTGCGTTCAACGCAATTATCTCTGCCTCGGTCGTGGCTCTTGACCTG TCCTACGGAATCCCTATTGCCATCAACTGTCTTCAGGGGCGCAAATCGCTCCCGGAAAGAAAATGGAAATTGCCT AATGCAGTTGGATGGTTTGTCGACATTGTCGCTTTATCATATATCGCTTTGACTACCGTCCTTTTCGTCTTCCCT CCGTCAAGCACGGTCACGGGAAGCAGTATGAACTACTGCATTGCAGCATTTGCTGTTATTATCATCATCTCCGTG TTCCAGTGGTTTGTGGATGGAAGAAAGAACTTCACCGGTCCTCGCGCTGACATCCTCGACGCATTGGATACTGTG CCTACGATAGAGGAGGTCCAGCCCATGCACGAAAAGGAACTTGCTGGTCGGGCTTAG |
| Gene | >Pro_DTO377G3_2|g8089.t1 ATGAAGGACGATTCACTCCAAGGCGATGATGCCAAGTTGGCGGCTTTGGGCCATAAGCCTGAACTCCAACGTAGT CATTCGACATGGTAAGGGATGCGCTAGCATATGCAGGCTTGATACTGACAGGACTCTCTAGGTCGATGCTTGGTC TGGCCTTTGCGGTTCTTAATGTATGTCAGACCTGGATTGCGACCGGGATATTTGGCTAACCAAGCTAGTCGTGGA CTGCGCTTTCGGCCAGTTTGTCGATCAGTCTTACATCTGGTGGAAGTACCAGTGTGATTTGGGGTACGTTGGTTA GAAATACTTGGTTTCTACCTCGCTGACACGCATCCAGGACTGGTTACTGCAGGATTCTGCAATCTTTGTATCGCA TGTTCGTTGGCTGAATTTCTTTCGGCATATCCTACGTAAGCTCCGGCATGTCCCCTTTTGGTATATTACCAGCTG ATCCTTTTGCAGAGCCGGTGGACAATATCATTGGGTAGCAGGTGAGTCATCCTATCCCTACAGACCCTTTATGCT ATATGACCTGGACTAACCCTAACTCTGTTACTAGCCAGTATGTTCCCCTCCTATACCTCGTCATACTTCATACTA ACGAATCGAAGTCGCGTGGCCGAGCACAGTCCCAATCCTATCATGGGTTACAGGCTGGATCAATGTGGCAGGCTG GGTAGGCAAGGCAATCATTCAATGTGGTACTCAACCTAACACACAACCAGGTTGCACTCGTCGCTACGAACTCCC TTCTCTCCAGTCAACTTATTGTCGGCATCATCTCGGTTCTTCATGAGGTTAGAGGCTCACTCCATACTCTTCCTA CAATGCTAACATGATATGCAGAGCTATGTCCCACAACGCTGGCATCAATTCCTCATCTACGTTGGATTGACCGTC GGTTCCTTCATCATCAATGCCTTCATGAACTCCATCTTGCCGCTCATTTACCGCGGTGCTTGTGGGTTACCTCTC CCAGCTTGACTTGCTATCGCTAACAATATATGTAGTCATGTGGTCGATTGGAGGGTTTGTGATTGTGTCAATTAC ATGTCTCGCATGCGCTTCTCCCAACTACAACACAGCTTAGTATGAGATCCTCAGCAGTATCAAGTTATGACAGAC TACTGACATCCACAGCTTCGTGTTCTGTGACTTTGTCAATACAACCGGCTGTATGCTCCCCGATAACTCTATTAT GATGATTTTGCTAATTCAGCTTAGGGCCTGATGGAGTCGCATGGCTTCTAGGTGTATGTTTACTGCATCCATTGT AACGATGCAATGATACTAACATATATCCAGTTGCTTCAAGGAGGGCTTGGCGTTACTGCCTTTGTAAGTCATGGT CATTGCGATACTAAACCAATTCAACTAACACTATCTAGGATGCTGTGGCACACATGATCGAAGGTAAAGATTACT CTGGGTTTGAGAAGTTAGGGAGAGGGACTGACACGCGTTTCTAGAGGTGCCCAATGCCGACATCGAGGGACCGAA AATCATGGTTACCTGCGTGGGTATCGGAGTCTTCACCGGTTGTATCTTTTTGATCGTCCTTCTATTCGTCGCAGG AAACATGCAAACGGTCGCATCCTCCGCAGCCGGTCCTCTTCTGCAGATCCTCATCGATGCGACCAAGAGCAACGC GGGTGGTATCTGCCTTTTGATGTACGTGGTGAAAATTTCCCCTGTTGTGCTTCCACTGACGTGAGGTTATAGGTT GCCCCTGGTCTGCTTGGTCTTTGCTATAATCAGCGTCATGACCACCAGTAGCCGAATGATCTTTGCATTTGCAAG GTATTTGATATTCTTCCTGGCATACAATGCGTATACTGACTCTTCACAGAGATGGAGGCCTTCCTGCCTCTCGGT TCTTTGCAAAGGTCCACCCAACACTCAAATTGCCCCTCAACGCACTCATTCTTAGTGTTGTTGTGGTCATTGCAT TCGGATGCATCTTCCTCGGCTCTTCAAGGTAATCATCATCACCCACGATAGCGCAATAGTAACTAACAGAGTCTA GTGCGTTCAACGCAATTATCTCTGCCTCGGTCGTGGCTCTTGACCTGTCCTACGGAATCCCTATTGCCATCAACT GTCTTCAGGGGCGCAAATCGCTCCCGGAAAGAAAATGGAAATTGCCTAATGCAGTTGGATGGTTTGTCGACATTG TATGTTGCCAGGGAATTTGAATGAAGCCGAACATCTCTAATCATGATTAGGTCGCTTTATCATATATCGCTTTGA CTACCGTCCTTTTCGTCTTCCCTCCGTCAAGCACGGTCACGGGAAGCAGTATGAGTGAGTAACCTGCGAGGTTAT CTATGACATTTTTCGTACTAACCTTTCTATATAGACTACTGCATTGCAGCATTTGCTGTTATTATCATCATCTCC GTGTTCCAGTGGTTTGTGGATGGAAGAAAGAACTTCACCGGTCCTCGCGCTGACATCCTCGACGCATTGGATACT GTGCCTACGATAGAGGAGGTCCAGCCCATGCACGAAAAGGAACTTGCTGGTCGGGCTTAG |