© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g8056.t1 |
| Gene name | |
| Location | scaffold_28:236848..238624 |
| Strand | - |
| Gene length (bp) | 1776 |
| Transcript length (bp) | 1656 |
| Coding sequence length (bp) | 1656 |
| Protein length (aa) | 552 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 9.4E-128 | 56 | 514 |
| PF13520 | AA_permease_2 | Amino acid permease | 1.4E-29 | 59 | 501 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 52 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 59 | 81 | 22 |
| 2 | 86 | 108 | 22 |
| 3 | 128 | 150 | 22 |
| 4 | 165 | 187 | 22 |
| 5 | 194 | 216 | 22 |
| 6 | 247 | 269 | 22 |
| 7 | 289 | 308 | 19 |
| 8 | 337 | 359 | 22 |
| 9 | 380 | 402 | 22 |
| 10 | 412 | 434 | 22 |
| 11 | 454 | 476 | 22 |
| 12 | 491 | 508 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g8056.t1 MVSHDASAAHDTKTSANVISVESDNVFRDTKESDAEQNHADTSNSGELKRRLKSRHLQMIAIGGTIGTGLFISSG TAIAESGPAGALIAYIFVGSIVYSVMSSLGEVATYIPMPGAFTSYAARLIDPSLGFSMGWIYWFNWASTFAVELT ATGTIIQYWDPSLNIAIFIGVFWVFITAMNFLPVNFYGEVEFWFSTIKVATVVGFIIFAICIDVGVGEQGYLGFR YWSTPQAFATYSPHLPVSVGKFVGFWAVLIQAGFSYQGTELVGVAAGETENPQKTVPSAIRKTFVRILLFFVLTI FFIGLVVPYDNGRLTTATTNASSSPMVIAADLAGVKVLPSLINAVLLSVVLSAANSNVYSGSRVLTGLAHEGFAP ACFGWVTKHGVPYISVTFTALFGLLGFMNVSNDAGQVFTWLVNLSSVAGFVTWASINACHISFMRVLATRGISRD TLPYKAVLQPYLAWYGLFFNVLIALTQGFTSFIPHFRVTDFFVAYICPIVFVVLYIGHKVIFRPSFVRAADADID TGRLHYQKQIDPPMPWYWRAWGWFTN* |
| Coding | >Pro_DTO377G3_2|g8056.t1 ATGGTGTCTCACGATGCTTCCGCGGCACATGATACCAAAACATCTGCAAATGTGATCTCTGTAGAGTCGGACAAT GTTTTTCGAGACACCAAAGAGTCTGATGCCGAGCAAAATCACGCGGACACCTCCAACTCTGGGGAACTCAAGCGC AGGCTGAAAAGCAGGCATTTACAGATGATTGCAATTGGTGGAACTATTGGCACAGGACTCTTTATTTCCAGTGGT ACTGCCATCGCAGAATCCGGCCCCGCGGGCGCGTTGATCGCCTATATATTTGTCGGCTCCATTGTCTATTCTGTC ATGAGCTCGTTGGGCGAAGTTGCAACCTATATTCCAATGCCCGGTGCCTTCACATCCTATGCAGCCCGGTTGATC GACCCAAGTCTCGGATTTTCCATGGGTTGGATCTATTGGTTCAACTGGGCCTCCACATTTGCTGTCGAACTAACC GCCACCGGTACTATCATCCAATATTGGGATCCAAGCCTAAACATTGCTATTTTCATCGGAGTGTTTTGGGTGTTC ATCACGGCTATGAACTTCCTCCCTGTCAATTTCTACGGCGAAGTGGAGTTCTGGTTCTCAACTATCAAAGTGGCC ACTGTTGTCGGCTTCATCATTTTTGCCATTTGCATCGATGTCGGAGTTGGGGAGCAGGGCTATCTGGGCTTTCGC TACTGGAGCACGCCACAGGCTTTTGCCACGTATAGTCCCCATCTACCGGTATCTGTAGGCAAGTTCGTTGGCTTC TGGGCGGTGCTCATCCAAGCCGGATTCTCTTATCAAGGCACGGAGCTTGTCGGTGTGGCGGCTGGAGAAACCGAA AACCCACAAAAGACGGTCCCATCAGCTATCCGCAAGACGTTTGTTCGAATTCTTCTCTTCTTTGTCTTGACGATT TTCTTCATCGGGCTCGTGGTCCCCTATGACAACGGCCGCCTCACCACGGCGACCACCAACGCATCATCCTCGCCT ATGGTTATTGCAGCTGATTTGGCAGGAGTCAAAGTTCTTCCAAGCTTGATCAATGCTGTGCTCTTGTCCGTGGTC TTATCGGCCGCAAACTCCAATGTGTATAGCGGCAGTCGAGTCCTCACTGGATTAGCACATGAAGGGTTTGCCCCA GCCTGTTTCGGTTGGGTAACCAAGCACGGTGTTCCGTATATTAGCGTGACATTCACCGCTTTGTTTGGCTTGTTA GGTTTCATGAACGTTTCCAATGACGCAGGGCAAGTTTTTACCTGGCTGGTGAATCTTTCTAGTGTTGCGGGCTTT GTGACTTGGGCCTCCATCAATGCGTGTCATATCTCGTTCATGCGGGTATTGGCAACCCGCGGGATTTCTCGCGAT ACGCTTCCATATAAGGCCGTCTTGCAACCATATCTCGCTTGGTATGGTTTGTTTTTCAATGTTCTTATCGCCCTC ACCCAGGGTTTCACTTCTTTCATCCCACATTTCCGGGTGACCGACTTCTTTGTTGCCTACATTTGCCCCATCGTC TTTGTCGTGCTCTATATTGGACACAAGGTGATTTTCCGTCCGTCATTTGTCCGTGCCGCCGATGCCGATATCGAC ACTGGCCGCTTGCACTATCAAAAGCAAATCGATCCTCCCATGCCATGGTACTGGAGGGCCTGGGGCTGGTTCACA AATTAA |
| Transcript | >Pro_DTO377G3_2|g8056.t1 ATGGTGTCTCACGATGCTTCCGCGGCACATGATACCAAAACATCTGCAAATGTGATCTCTGTAGAGTCGGACAAT GTTTTTCGAGACACCAAAGAGTCTGATGCCGAGCAAAATCACGCGGACACCTCCAACTCTGGGGAACTCAAGCGC AGGCTGAAAAGCAGGCATTTACAGATGATTGCAATTGGTGGAACTATTGGCACAGGACTCTTTATTTCCAGTGGT ACTGCCATCGCAGAATCCGGCCCCGCGGGCGCGTTGATCGCCTATATATTTGTCGGCTCCATTGTCTATTCTGTC ATGAGCTCGTTGGGCGAAGTTGCAACCTATATTCCAATGCCCGGTGCCTTCACATCCTATGCAGCCCGGTTGATC GACCCAAGTCTCGGATTTTCCATGGGTTGGATCTATTGGTTCAACTGGGCCTCCACATTTGCTGTCGAACTAACC GCCACCGGTACTATCATCCAATATTGGGATCCAAGCCTAAACATTGCTATTTTCATCGGAGTGTTTTGGGTGTTC ATCACGGCTATGAACTTCCTCCCTGTCAATTTCTACGGCGAAGTGGAGTTCTGGTTCTCAACTATCAAAGTGGCC ACTGTTGTCGGCTTCATCATTTTTGCCATTTGCATCGATGTCGGAGTTGGGGAGCAGGGCTATCTGGGCTTTCGC TACTGGAGCACGCCACAGGCTTTTGCCACGTATAGTCCCCATCTACCGGTATCTGTAGGCAAGTTCGTTGGCTTC TGGGCGGTGCTCATCCAAGCCGGATTCTCTTATCAAGGCACGGAGCTTGTCGGTGTGGCGGCTGGAGAAACCGAA AACCCACAAAAGACGGTCCCATCAGCTATCCGCAAGACGTTTGTTCGAATTCTTCTCTTCTTTGTCTTGACGATT TTCTTCATCGGGCTCGTGGTCCCCTATGACAACGGCCGCCTCACCACGGCGACCACCAACGCATCATCCTCGCCT ATGGTTATTGCAGCTGATTTGGCAGGAGTCAAAGTTCTTCCAAGCTTGATCAATGCTGTGCTCTTGTCCGTGGTC TTATCGGCCGCAAACTCCAATGTGTATAGCGGCAGTCGAGTCCTCACTGGATTAGCACATGAAGGGTTTGCCCCA GCCTGTTTCGGTTGGGTAACCAAGCACGGTGTTCCGTATATTAGCGTGACATTCACCGCTTTGTTTGGCTTGTTA GGTTTCATGAACGTTTCCAATGACGCAGGGCAAGTTTTTACCTGGCTGGTGAATCTTTCTAGTGTTGCGGGCTTT GTGACTTGGGCCTCCATCAATGCGTGTCATATCTCGTTCATGCGGGTATTGGCAACCCGCGGGATTTCTCGCGAT ACGCTTCCATATAAGGCCGTCTTGCAACCATATCTCGCTTGGTATGGTTTGTTTTTCAATGTTCTTATCGCCCTC ACCCAGGGTTTCACTTCTTTCATCCCACATTTCCGGGTGACCGACTTCTTTGTTGCCTACATTTGCCCCATCGTC TTTGTCGTGCTCTATATTGGACACAAGGTGATTTTCCGTCCGTCATTTGTCCGTGCCGCCGATGCCGATATCGAC ACTGGCCGCTTGCACTATCAAAAGCAAATCGATCCTCCCATGCCATGGTACTGGAGGGCCTGGGGCTGGTTCACA AATTAA |
| Gene | >Pro_DTO377G3_2|g8056.t1 ATGGTGTCTCACGATGCTTCCGCGGCACATGATACCAAAACATCTGCAAATGTGATCTCTGTAGAGTCGGACAAT GTTTTTCGAGACACCAAAGAGTCTGATGCCGAGCAAAATCACGCGGACACCTCCAACTCTGGGGAACTCAAGCGC AGGCTGAAAAGCAGGCATTTACAGATGATTGCAATTGGTAAGTCTTGATTTTCTTGGTCAAGATGGGTTATCGCA GATGCTAACTGGCTTCGGTCGCAGGTGGAACTATTGGCACAGGTATACTATCTTGCCCTCAGGTCCTCGGCTAGC AAATCCAGAAGTCTGACCTATCCAGGACTCTTTATTTCCAGTGGTACTGCCATCGCAGAATCCGGCCCCGCGGGC GCGTTGATCGCCTATATATTTGTCGGCTCCATTGTCTATTCTGTCATGAGCTCGTTGGGCGAAGTTGCAACCTAT ATTCCAATGCCCGGTGCCTTCACATCCTATGCAGCCCGGTTGATCGACCCAAGTCTCGGATTTTCCATGGGTTGG ATCTATTGGTTCAACTGGGCCTCCACATTTGCTGTCGAACTAACCGCCACCGGTACTATCATCCAATATTGGGAT CCAAGCCTAAACATTGCTATTTTCATCGGAGTGTTTTGGGTGTTCATCACGGCTATGAACTTCCTCCCTGTCAAT TTCTACGGCGAAGTGGAGTTCTGGTTCTCAACTATCAAAGTGGCCACTGTTGTCGGCTTCATCATTTTTGCCATT TGCATCGATGTCGGAGTTGGGGAGCAGGGCTATCTGGGCTTTCGCTACTGGAGCACGCCACAGGCTTTTGCCACG TATAGTCCCCATCTACCGGTATCTGTAGGCAAGTTCGTTGGCTTCTGGGCGGTGCTCATCCAAGCCGGATTCTCT TATCAAGGCACGGAGCTTGTCGGTGTGGCGGCTGGAGAAACCGAAAACCCACAAAAGACGGTCCCATCAGCTATC CGCAAGACGTTTGTTCGAATTCTTCTCTTCTTTGTCTTGACGATTTTCTTCATCGGGCTCGTGGTCCCCTATGAC AACGGCCGCCTCACCACGGCGACCACCAACGCATCATCCTCGCCTATGGTTATTGCAGCTGATTTGGCAGGAGTC AAAGTTCTTCCAAGCTTGATCAATGCTGTGCTCTTGTCCGTGGTCTTATCGGCCGCAAACTCCAATGTGTATAGC GGCAGTCGAGTCCTCACTGGATTAGCACATGAAGGGTTTGCCCCAGCCTGTTTCGGTTGGGTAACCAAGCACGGT GTTCCGTATATTAGCGTGACATTCACCGCTTTGTTTGGCTTGTTAGGTTTCATGAACGTTTCCAATGACGCAGGG CAAGTTTTTACCTGGCTGGTGAATCTTTCTAGTGTTGCGGGCTTTGTGACTTGGGCCTCCATCAATGCGTGTCAT ATCTCGTTCATGCGGGTATTGGCAACCCGCGGGATTTCTCGCGATACGCTTCCATATAAGGCCGTCTTGCAACCA TATCTCGCTTGGTATGGTTTGTTTTTCAATGTTCTTATCGCCCTCACCCAGGGTTTCACTTCTTTCATCCCACAT TTCCGGGTGACCGACTTCTTTGTTGCCTACATTTGCCCCATCGTCTTTGTCGTGCTCTATATTGGACACAAGGTG ATTTTCCGTCCGTCATTTGTCCGTGCCGCCGATGCCGATATCGACACTGGCCGCTTGCACTATCAAAAGCAAATC GATCCTCCCATGCCATGGTACTGGAGGGCCTGGGGCTGGTTCACAAATTAA |