Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8029.t1
Gene name
Locationscaffold_28:158615..160851
Strand-
Gene length (bp)2236
Transcript length (bp)1872
Coding sequence length (bp)1872
Protein length (aa) 624

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 2.7E-05 23 56
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 4.3E-05 259 401

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0046914 transition metal ion binding No
GO:0031323 regulation of cellular metabolic process No
GO:0046872 metal ion binding No
GO:0043167 ion binding No
GO:0051252 regulation of RNA metabolic process No
GO:0008150 biological_process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0010468 regulation of gene expression No
GO:0140110 transcription regulator activity No
GO:0050789 regulation of biological process No
GO:0005488 binding No
GO:2001141 regulation of RNA biosynthetic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0065007 biological regulation No
GO:0003674 molecular_function No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0019222 regulation of metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0080090 regulation of primary metabolic process No
GO:0043169 cation binding No
GO:0003700 DNA-binding transcription factor activity No
GO:0009889 regulation of biosynthetic process No
GO:0050794 regulation of cellular process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8029.t1
MIGGTQQSVPDSRVRKAPNRQSRSCKVCRLRKVKCDRVKPCHACCAHGYPSKCVYEHVPDEEAGPISQAEEIRNL
RAEIRELRGRIDDKHNGSGVQDLQRLDQLENLFESIRSAPSPLVDNLIRDVRNAHVGLKKGLVPVGPWEGREAYE
SYDYPSRHSSLSVRNRGLLNSPVEDFNNLRSEEDDDSDFERMSQSSGSDSSGTISVMSMQRPAVDVFVERFVDAF
SPEVDMKSGRAGALRAAAGIRMFSPLMTDAFEAVSVAFFGRSVQNKQIEASGFRLYPRVLRALQDALVDPEKCKA
ESTLVTVTLLLAFESVERTTQSGVLAHVRGAVRLFEHRGPENHMYGVEHLLFTELRPYWIGGALAARQPSFLARE
EWKTIPWSAGTSQKDILHHLLDLATEVPGLLAVSDAFKEAQITSVMGAQEMAIKQSTLWNGIRELTARFYQWHQE
WVVAYPDGPPQEAEQKGDQGFPIFQRRDLRTGATFIPTKFTYPNLLLAQTMCMYYAVRLILSSIDTRPEDRVSPM
EQYDLGCGICRSLEFYILTAPGNMINRLAFPTRVAWEAFPDGGPERHFMIEVLQLVEKRHALGLWGSSMPELSTK
EASSLNRVVSRVDANTPHRRDFP*
Coding >Pro_DTO377G3_2|g8029.t1
ATGATCGGTGGTACGCAACAATCTGTCCCCGACTCACGAGTCAGGAAGGCTCCGAACCGCCAGTCGCGGTCCTGC
AAAGTCTGCCGGCTCCGGAAAGTCAAGTGTGACCGAGTCAAGCCCTGCCACGCCTGCTGTGCCCATGGCTACCCC
TCCAAATGCGTGTATGAGCATGTTCCCGACGAAGAAGCTGGCCCCATCAGTCAGGCGGAAGAGATTCGGAACTTA
CGGGCGGAGATCCGCGAGCTGAGGGGGAGAATAGACGACAAACATAATGGATCTGGGGTCCAGGATCTCCAGCGC
CTGGACCAGCTCGAGAACTTATTTGAGTCTATTCGCTCTGCACCAAGCCCGCTAGTCGATAATCTTATTCGCGAT
GTTCGGAATGCACATGTCGGCCTGAAGAAGGGTTTGGTCCCTGTTGGACCATGGGAAGGCAGGGAAGCGTACGAA
TCCTACGATTATCCTTCGCGACATTCGTCACTCTCGGTTCGGAATCGCGGGTTACTTAATTCCCCGGTCGAAGAC
TTCAATAATCTGCGAAGTGAGGAAGACGATGACAGCGACTTTGAACGAATGTCACAGAGCAGTGGATCTGACTCG
TCTGGCACGATATCGGTCATGAGCATGCAAAGACCCGCAGTGGATGTGTTTGTCGAGAGATTCGTGGATGCATTT
AGCCCAGAAGTGGATATGAAATCTGGACGAGCGGGTGCATTGCGGGCTGCGGCTGGGATTCGAATGTTCTCGCCA
CTCATGACAGACGCGTTCGAGGCCGTCTCGGTGGCATTCTTTGGTCGTTCTGTGCAGAACAAGCAGATCGAGGCG
TCCGGATTCCGACTATACCCCCGCGTGCTACGTGCATTGCAGGATGCGCTGGTGGATCCTGAAAAATGCAAAGCA
GAATCAACACTGGTGACCGTAACTCTCTTGCTGGCTTTCGAGAGCGTTGAACGGACTACTCAGAGTGGTGTCCTT
GCTCACGTCCGAGGAGCAGTGCGTCTATTTGAACATCGTGGACCAGAAAATCACATGTATGGAGTTGAACATCTT
TTGTTCACCGAACTCCGTCCATATTGGATTGGCGGTGCTCTGGCAGCTCGACAACCCTCATTTCTGGCCCGTGAA
GAGTGGAAGACCATTCCATGGTCAGCAGGAACGAGTCAAAAAGATATTCTGCACCATCTACTTGACCTGGCTACC
GAGGTTCCGGGCTTACTGGCAGTATCAGATGCCTTTAAAGAAGCCCAAATCACATCTGTCATGGGCGCACAAGAG
ATGGCTATCAAACAGTCTACGCTTTGGAATGGAATACGCGAGCTTACGGCCCGTTTCTATCAATGGCACCAAGAG
TGGGTTGTCGCATACCCTGACGGGCCACCGCAGGAAGCCGAACAAAAGGGCGACCAGGGATTCCCAATCTTCCAA
CGCCGCGACCTCCGCACCGGGGCTACTTTCATCCCAACAAAATTCACATATCCAAACCTGCTACTCGCACAAACC
ATGTGTATGTACTACGCCGTGCGATTGATTCTGTCCTCAATCGACACTCGACCAGAGGATCGCGTCTCGCCCATG
GAACAGTATGACTTGGGTTGCGGGATCTGTCGCTCCTTGGAATTTTATATCCTCACTGCGCCGGGCAACATGATC
AATCGTCTTGCATTCCCCACTCGAGTAGCGTGGGAAGCATTCCCAGACGGAGGTCCAGAGCGCCATTTTATGATT
GAAGTGCTGCAACTCGTTGAGAAGCGGCATGCTCTTGGGCTTTGGGGCAGTTCCATGCCAGAGTTATCTACCAAA
GAAGCCTCGTCACTGAATCGGGTAGTCAGTAGAGTGGACGCAAATACTCCCCATAGACGTGATTTTCCGTAG
Transcript >Pro_DTO377G3_2|g8029.t1
ATGATCGGTGGTACGCAACAATCTGTCCCCGACTCACGAGTCAGGAAGGCTCCGAACCGCCAGTCGCGGTCCTGC
AAAGTCTGCCGGCTCCGGAAAGTCAAGTGTGACCGAGTCAAGCCCTGCCACGCCTGCTGTGCCCATGGCTACCCC
TCCAAATGCGTGTATGAGCATGTTCCCGACGAAGAAGCTGGCCCCATCAGTCAGGCGGAAGAGATTCGGAACTTA
CGGGCGGAGATCCGCGAGCTGAGGGGGAGAATAGACGACAAACATAATGGATCTGGGGTCCAGGATCTCCAGCGC
CTGGACCAGCTCGAGAACTTATTTGAGTCTATTCGCTCTGCACCAAGCCCGCTAGTCGATAATCTTATTCGCGAT
GTTCGGAATGCACATGTCGGCCTGAAGAAGGGTTTGGTCCCTGTTGGACCATGGGAAGGCAGGGAAGCGTACGAA
TCCTACGATTATCCTTCGCGACATTCGTCACTCTCGGTTCGGAATCGCGGGTTACTTAATTCCCCGGTCGAAGAC
TTCAATAATCTGCGAAGTGAGGAAGACGATGACAGCGACTTTGAACGAATGTCACAGAGCAGTGGATCTGACTCG
TCTGGCACGATATCGGTCATGAGCATGCAAAGACCCGCAGTGGATGTGTTTGTCGAGAGATTCGTGGATGCATTT
AGCCCAGAAGTGGATATGAAATCTGGACGAGCGGGTGCATTGCGGGCTGCGGCTGGGATTCGAATGTTCTCGCCA
CTCATGACAGACGCGTTCGAGGCCGTCTCGGTGGCATTCTTTGGTCGTTCTGTGCAGAACAAGCAGATCGAGGCG
TCCGGATTCCGACTATACCCCCGCGTGCTACGTGCATTGCAGGATGCGCTGGTGGATCCTGAAAAATGCAAAGCA
GAATCAACACTGGTGACCGTAACTCTCTTGCTGGCTTTCGAGAGCGTTGAACGGACTACTCAGAGTGGTGTCCTT
GCTCACGTCCGAGGAGCAGTGCGTCTATTTGAACATCGTGGACCAGAAAATCACATGTATGGAGTTGAACATCTT
TTGTTCACCGAACTCCGTCCATATTGGATTGGCGGTGCTCTGGCAGCTCGACAACCCTCATTTCTGGCCCGTGAA
GAGTGGAAGACCATTCCATGGTCAGCAGGAACGAGTCAAAAAGATATTCTGCACCATCTACTTGACCTGGCTACC
GAGGTTCCGGGCTTACTGGCAGTATCAGATGCCTTTAAAGAAGCCCAAATCACATCTGTCATGGGCGCACAAGAG
ATGGCTATCAAACAGTCTACGCTTTGGAATGGAATACGCGAGCTTACGGCCCGTTTCTATCAATGGCACCAAGAG
TGGGTTGTCGCATACCCTGACGGGCCACCGCAGGAAGCCGAACAAAAGGGCGACCAGGGATTCCCAATCTTCCAA
CGCCGCGACCTCCGCACCGGGGCTACTTTCATCCCAACAAAATTCACATATCCAAACCTGCTACTCGCACAAACC
ATGTGTATGTACTACGCCGTGCGATTGATTCTGTCCTCAATCGACACTCGACCAGAGGATCGCGTCTCGCCCATG
GAACAGTATGACTTGGGTTGCGGGATCTGTCGCTCCTTGGAATTTTATATCCTCACTGCGCCGGGCAACATGATC
AATCGTCTTGCATTCCCCACTCGAGTAGCGTGGGAAGCATTCCCAGACGGAGGTCCAGAGCGCCATTTTATGATT
GAAGTGCTGCAACTCGTTGAGAAGCGGCATGCTCTTGGGCTTTGGGGCAGTTCCATGCCAGAGTTATCTACCAAA
GAAGCCTCGTCACTGAATCGGGTAGTCAGTAGAGTGGACGCAAATACTCCCCATAGACGTGATTTTCCGTAG
Gene >Pro_DTO377G3_2|g8029.t1
ATGATCGGTGGTACGCAACAATCTGTCCCCGACTCACGAGTCAGGAAGGCTCCGAACCGCCAGTCGCGGTCCTGC
AAAGTCTGCCGGCTCCGGAAAGTCAAGGTCCGTTTACCCCCGTCATCGTGCTCAGATCGCCCCAGGGGTCGGGAC
GCTCCCGTACCCATTTGATGCGTCCCACTGGTCGTAACGCATCACGCAAGGCTAACGTGGATCCTGCTGTTAGTG
TGACCGAGTCAAGCCCTGCCACGCCTGCTGTGCCCATGGCTACCCCTCCAAATGCGTGTATGAGCATGTTCCCGA
CGAAGAAGCTGGCCCCATCAGTCAGGCGGAAGAGATTCGGAACTTACGGGCGGAGATCCGCGAGCTGAGGGGGAG
AATAGACGACAAACATAATGGTAAATTTGCAAGCCCCGCCCACTCAGTCTTTTCTCTAGCGTGTGGCAAACTCAT
GTGGATGGAGAACAAATCGCTGATGCCTGTGCAGGATCTGGGGTCCAGGATCTCCAGCGCCTGGACCAGCTCGAG
AACTTATTTGAGTCTATTCGCTCTGCACCAAGCCCGCTAGTCGATAATCTTATTCGCGATGTTCGGAATGCACAT
GTCGGCCTGAAGAAGGGTTTGGTCCCTGTTGGACCATGGGAAGGCAGGGAAGGTAAGTTATGTGGTATAACGATT
GCTAGAAAGCTACCCGTGCTGACAGCCTCAGCGTACGAATCCTACGATTATCCTTCGCGACATTCGTCACTCTCG
GTTCGGAATCGCGGGTTACTTAATTCCCCGGTCGAAGACTTCAATAATCTGCGAAGTGAGGAAGACGATGACAGC
GACTTTGAACGAATGTCACAGAGCAGTGGATCTGACTCGTCTGGCACGATATCGGTCATGAGCATGCAAAGACCC
GCAGTGGATGTGTTTGTCGAGAGATTCGTGGATGCATTTAGCCCAGAAGTGGATATGAAATCTGGACGAGCGGGT
GCATTGCGGGCTGCGGCTGGGATTCGAATGTTCTCGCCACTCATGACAGACGCGTTCGAGGCCGTCTCGGTGGCA
TTCTTTGGTCGTTCTGTGCAGAACAAGCAGATCGAGGCGTCCGGATTCCGACTATACCCCCGCGTGCTACGTGCA
TTGCAGGATGCGCTGGTGGATCCTGAAAAATGCAAAGCAGAATCAACACTGGTGACCGTAACTCTCTTGCTGGCT
TTCGAGGTTGGTTTGATAAAACACTTTTTATCCCTAGTCAATACTAACTACAGCAGAGCGTTGAACGGACTACTC
AGAGTGGTGTCCTTGCTCACGTCCGAGGAGCAGTGCGTCTATTTGAACATCGTGGACCAGAAAATCACATGTATG
GAGTTGAACATCTTTTGTTCACCGAACTCCGTCCATATTGGGTAAGATCACAGACCTTTCGTAATTTCCTCCTCT
AATTCCAATGGCTTAGATTGGCGGTGCTCTGGCAGCTCGACAACCCTCATTTCTGGCCCGTGAAGAGTGGAAGAC
CATTCCATGGTCAGCAGGAACGAGTCAAAAAGATATTCTGCACCATCTACTTGACCTGGCTACCGAGGTTCCGGG
CTTACTGGCAGTATCAGATGCCTTTAAAGAAGCCCAAATCACATCTGTCATGGGCGCACAAGAGATGGCTATCAA
ACAGTCTACGCTTTGGAATGGAATACGCGAGCTTACGGCCCGTTTCTATCAATGGCACCAAGAGTGGGTTGTCGC
ATACCCTGACGGGCCACCGCAGGAAGCCGAACAAAAGGGCGACCAGGGATTCCCAATCTTCCAACGCCGCGACCT
CCGCACCGGGGCTACTTTCATCCCAACAAAATTCACATATCCAAACCTGCTACTCGCACAAACCATGTGTATGTA
CTACGCCGTGCGATTGATTCTGTCCTCAATCGACACTCGACCAGAGGATCGCGTCTCGCCCATGGAACAGTATGA
CTTGGGTTGCGGGATCTGTCGCTCCTTGGAATTTTATATCCTCACTGCGCCGGGCAACATGATCAATCGTCTTGC
ATTCCCCACTCGAGTAGCGTGGGAAGCATTCCCAGACGGAGGTCCAGAGCGCCATTTTATGATTGAAGTGCTGCA
ACTCGTTGAGAAGCGGCATGCTCTTGGGCTTTGGGGCAGTTCCATGCCAGAGTTATCTACCAAAGAAGCCTCGTC
ACTGAATCGGGTAGTCAGTAGAGTGGACGCAAATACTCCCCATAGACGTGATTTTCCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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