Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g801.t1
Gene name
Location	scaffold_01:2143915..2144742
Strand	-
Gene length (bp)	827
Transcript length (bp)	756
Coding sequence length (bp)	756
Protein length (aa)	252

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00957	Synaptobrevin	Synaptobrevin	1.2E-31	155	241
PF13774	Longin	Regulated-SNARE-like domain	1.4E-28	39	139

GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	220	242	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g801.t1 MASSSKTSSLLYSCIAYRTTILAEHSSPGSSTSAASSLASIILPKITHDKPQKLTFTHERLFVHYIADSPTGNQS GDGNIAEPNSHAPLSFLVVASAEQGRRIPFAYLLEMKRKFLTTYNPSTTDFATLPAYGCAAFNNELRSLLQSYNT APPADSLASARREIDSVRDIMTENIERVLERGERIDLLVDKTDRLGGSAHDFRIRSRGLRRRMWWKNTKLMIMIV IVIIFLLYLFIGMGCGLPAWGKCVGH*
Coding	>Pro_DTO377G3_2\|g801.t1 ATGGCCTCATCCTCCAAGACGAGCTCTTTGCTCTACTCATGCATCGCCTATCGCACTACCATTCTGGCCGAGCAC TCCTCGCCGGGTAGTTCAACGAGTGCCGCCTCGTCACTAGCCTCAATCATCCTCCCAAAGATCACGCACGACAAG CCACAAAAGCTCACCTTCACCCATGAACGACTGTTCGTCCATTACATTGCCGACTCGCCAACCGGCAACCAATCC GGCGATGGCAACATTGCGGAGCCCAACTCACACGCTCCCCTGAGCTTCCTGGTAGTTGCATCGGCAGAGCAAGGC CGCCGCATCCCATTCGCCTACCTGCTAGAAATGAAGCGCAAGTTCTTAACCACCTACAACCCGTCCACAACCGAC TTCGCTACACTGCCCGCCTACGGCTGCGCTGCCTTCAACAACGAGCTGCGCTCTCTCCTCCAATCCTACAACACC GCCCCGCCAGCAGACTCCCTCGCGTCCGCCCGGCGCGAAATCGATAGCGTCCGCGATATTATGACCGAGAATATC GAGCGGGTCCTGGAGCGCGGCGAGCGCATTGATCTGCTGGTTGACAAGACGGATCGGCTTGGCGGAAGTGCGCAT GACTTCCGGATTCGTAGCCGGGGACTGCGGAGGCGGATGTGGTGGAAGAATACCAAGTTGATGATTATGATTGTG ATCGTCATTATCTTCTTGCTGTATCTGTTCATTGGTATGGGGTGTGGACTACCTGCATGGGGGAAGTGTGTTGGA CACTAG
Transcript	>Pro_DTO377G3_2\|g801.t1 ATGGCCTCATCCTCCAAGACGAGCTCTTTGCTCTACTCATGCATCGCCTATCGCACTACCATTCTGGCCGAGCAC TCCTCGCCGGGTAGTTCAACGAGTGCCGCCTCGTCACTAGCCTCAATCATCCTCCCAAAGATCACGCACGACAAG CCACAAAAGCTCACCTTCACCCATGAACGACTGTTCGTCCATTACATTGCCGACTCGCCAACCGGCAACCAATCC GGCGATGGCAACATTGCGGAGCCCAACTCACACGCTCCCCTGAGCTTCCTGGTAGTTGCATCGGCAGAGCAAGGC CGCCGCATCCCATTCGCCTACCTGCTAGAAATGAAGCGCAAGTTCTTAACCACCTACAACCCGTCCACAACCGAC TTCGCTACACTGCCCGCCTACGGCTGCGCTGCCTTCAACAACGAGCTGCGCTCTCTCCTCCAATCCTACAACACC GCCCCGCCAGCAGACTCCCTCGCGTCCGCCCGGCGCGAAATCGATAGCGTCCGCGATATTATGACCGAGAATATC GAGCGGGTCCTGGAGCGCGGCGAGCGCATTGATCTGCTGGTTGACAAGACGGATCGGCTTGGCGGAAGTGCGCAT GACTTCCGGATTCGTAGCCGGGGACTGCGGAGGCGGATGTGGTGGAAGAATACCAAGTTGATGATTATGATTGTG ATCGTCATTATCTTCTTGCTGTATCTGTTCATTGGTATGGGGTGTGGACTACCTGCATGGGGGAAGTGTGTTGGA CACTAG
Gene	>Pro_DTO377G3_2\|g801.t1 ATGGCCTCATCCTCCAAGACGAGCTCTTTGCTCTAGTAAGTCTTGCTGTCTGACATTTGAGGAGTCAAAGAAACT ATTTTCAGACTAACAATGTAATCAACTTCAGCTCATGCATCGCCTATCGCACTACCATTCTGGCCGAGCACTCCT CGCCGGGTAGTTCAACGAGTGCCGCCTCGTCACTAGCCTCAATCATCCTCCCAAAGATCACGCACGACAAGCCAC AAAAGCTCACCTTCACCCATGAACGACTGTTCGTCCATTACATTGCCGACTCGCCAACCGGCAACCAATCCGGCG ATGGCAACATTGCGGAGCCCAACTCACACGCTCCCCTGAGCTTCCTGGTAGTTGCATCGGCAGAGCAAGGCCGCC GCATCCCATTCGCCTACCTGCTAGAAATGAAGCGCAAGTTCTTAACCACCTACAACCCGTCCACAACCGACTTCG CTACACTGCCCGCCTACGGCTGCGCTGCCTTCAACAACGAGCTGCGCTCTCTCCTCCAATCCTACAACACCGCCC CGCCAGCAGACTCCCTCGCGTCCGCCCGGCGCGAAATCGATAGCGTCCGCGATATTATGACCGAGAATATCGAGC GGGTCCTGGAGCGCGGCGAGCGCATTGATCTGCTGGTTGACAAGACGGATCGGCTTGGCGGAAGTGCGCATGACT TCCGGATTCGTAGCCGGGGACTGCGGAGGCGGATGTGGTGGAAGAATACCAAGTTGATGATTATGATTGTGATCG TCATTATCTTCTTGCTGTATCTGTTCATTGGTATGGGGTGTGGACTACCTGCATGGGGGAAGTGTGTTGGACACT AG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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