Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g8004.t1
Gene name
Locationscaffold_28:95972..98158
Strand+
Gene length (bp)2186
Transcript length (bp)1845
Coding sequence length (bp)1845
Protein length (aa) 615

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13426 PAS_9 PAS domain 1.6E-15 313 408

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g8004.t1
MTSHIISVLWQTLSIVSVAFLVMKPWRVHEMIKDLRGLQGLHDGLRTPDAESLRSFTETIQDEYHEWVSESGRLS
QTDQLLDNFPHPPRLESLNAIHEEEMEAYPTPNPSIKNLRRHATANELPLLQQINPNEGAPEFNPVSEETGSYDL
IAPYDGGDLPLYKLERIADIMFSSEHMLTILNNPRYLARFRDFILEERPRSISTLTYYLNASKALKAIEYANALV
RLSIDVPPPAVRTDGEAAGVTVNRVLERRVVDGLLALTAEELPAFITARCINITSKIVEERVRGTLPMKFRGTSN
ALAEVFCLTDPSRPDNPIIFASEEFHRTTQYGMDYVLGRNCRFLQGPKTNANSVRRLREAINAGRHHSEMFLNYR
RDGSPFMNLLQCAPLCDSHGRVKYFIGAQIDVSGLAMEGASMESLMELQNKYRDPDEESIAEPPEAEEKDEFREL
TELFSPRELSAVQQYGGNLFQPMQSLAYPHHPRSWFQPDASLERETEAVRLREMKSPLFRMSFAGVYENYLLVRP
YPSLRILFTSPALQIPGMLQSPFLSRIGSSSAVKDDLLQTMKVGRSVTARIKWTTRSNPDGRNRWVHCTPLLASN
GQVGVWMVVVVDDG*
Coding >Pro_DTO377G3_2|g8004.t1
ATGACCTCCCATATTATCTCTGTACTTTGGCAGACTCTTTCCATCGTGTCCGTTGCATTCCTTGTAATGAAACCC
TGGAGAGTGCATGAAATGATAAAAGATCTCCGTGGCCTCCAGGGGCTCCATGATGGGCTAAGAACCCCCGATGCA
GAGTCATTGCGCTCATTCACTGAGACTATTCAAGACGAATACCACGAATGGGTCAGCGAGTCCGGTCGATTGTCA
CAGACTGATCAATTATTGGACAACTTCCCCCATCCACCGAGGTTGGAAAGTCTAAATGCAATTCACGAGGAAGAG
ATGGAAGCGTATCCCACACCAAATCCTTCTATCAAGAATCTGCGTCGACATGCGACGGCCAATGAGCTTCCTCTT
CTACAGCAAATCAATCCGAATGAGGGAGCACCAGAGTTTAACCCCGTCAGCGAAGAGACCGGCTCATACGATCTC
ATTGCGCCCTACGATGGCGGCGATCTACCACTCTACAAGCTGGAAAGAATTGCCGACATCATGTTTTCGTCCGAA
CATATGCTCACAATCCTAAATAACCCCCGGTATCTAGCTCGATTTCGTGACTTTATTCTCGAAGAGCGGCCGCGC
TCCATTTCTACCCTCACATACTACCTCAACGCCTCCAAAGCGCTTAAGGCAATTGAATATGCTAATGCGCTCGTC
CGCCTCTCTATTGATGTGCCTCCCCCAGCAGTCCGGACGGACGGGGAAGCCGCCGGGGTGACGGTGAACCGTGTT
TTGGAGCGGCGTGTTGTAGACGGGCTGTTGGCTCTCACTGCCGAGGAGCTCCCTGCATTCATCACAGCCAGATGT
ATCAACATCACAAGCAAGATCGTGGAGGAGCGAGTCCGAGGAACCTTGCCAATGAAGTTTCGCGGGACTTCGAAT
GCACTGGCAGAAGTATTTTGCCTGACAGACCCATCGCGACCTGACAATCCAATTATTTTCGCATCAGAAGAGTTC
CACAGAACAACTCAGTACGGCATGGATTACGTGCTTGGTCGAAATTGTCGCTTTTTACAAGGCCCGAAGACAAAT
GCGAACAGTGTTCGTCGACTTCGCGAAGCTATTAACGCAGGCCGGCATCATTCAGAAATGTTTCTCAACTATCGT
CGTGACGGCTCTCCATTCATGAACCTGCTCCAGTGCGCACCTCTATGCGACAGCCACGGCCGTGTCAAATACTTC
ATCGGCGCACAGATCGATGTCTCGGGACTTGCAATGGAGGGAGCCTCGATGGAATCCTTGATGGAACTACAAAAC
AAATACCGCGATCCCGACGAAGAGAGCATTGCGGAGCCACCAGAAGCAGAAGAGAAGGATGAGTTCCGTGAGCTG
ACTGAACTGTTCAGTCCGCGGGAACTCTCCGCTGTTCAACAGTATGGTGGAAATCTGTTCCAACCTATGCAAAGC
CTCGCATATCCGCATCACCCGCGATCATGGTTCCAGCCCGACGCATCCTTAGAAAGAGAGACTGAAGCCGTCCGT
CTACGTGAGATGAAATCGCCCCTTTTCCGGATGTCATTTGCGGGCGTGTATGAGAACTATCTCCTCGTTCGACCA
TACCCTTCCCTCCGGATTCTGTTCACGTCGCCTGCCCTCCAGATCCCAGGCATGCTGCAATCACCATTTCTATCC
CGCATTGGCAGTTCCTCGGCAGTTAAAGATGACCTACTACAAACTATGAAAGTTGGGCGCAGTGTGACTGCGCGT
ATCAAGTGGACAACGCGTTCCAATCCCGACGGTCGCAATCGATGGGTCCATTGCACGCCTCTCCTTGCGAGTAAT
GGTCAAGTGGGTGTGTGGATGGTTGTAGTTGTGGATGATGGATGA
Transcript >Pro_DTO377G3_2|g8004.t1
ATGACCTCCCATATTATCTCTGTACTTTGGCAGACTCTTTCCATCGTGTCCGTTGCATTCCTTGTAATGAAACCC
TGGAGAGTGCATGAAATGATAAAAGATCTCCGTGGCCTCCAGGGGCTCCATGATGGGCTAAGAACCCCCGATGCA
GAGTCATTGCGCTCATTCACTGAGACTATTCAAGACGAATACCACGAATGGGTCAGCGAGTCCGGTCGATTGTCA
CAGACTGATCAATTATTGGACAACTTCCCCCATCCACCGAGGTTGGAAAGTCTAAATGCAATTCACGAGGAAGAG
ATGGAAGCGTATCCCACACCAAATCCTTCTATCAAGAATCTGCGTCGACATGCGACGGCCAATGAGCTTCCTCTT
CTACAGCAAATCAATCCGAATGAGGGAGCACCAGAGTTTAACCCCGTCAGCGAAGAGACCGGCTCATACGATCTC
ATTGCGCCCTACGATGGCGGCGATCTACCACTCTACAAGCTGGAAAGAATTGCCGACATCATGTTTTCGTCCGAA
CATATGCTCACAATCCTAAATAACCCCCGGTATCTAGCTCGATTTCGTGACTTTATTCTCGAAGAGCGGCCGCGC
TCCATTTCTACCCTCACATACTACCTCAACGCCTCCAAAGCGCTTAAGGCAATTGAATATGCTAATGCGCTCGTC
CGCCTCTCTATTGATGTGCCTCCCCCAGCAGTCCGGACGGACGGGGAAGCCGCCGGGGTGACGGTGAACCGTGTT
TTGGAGCGGCGTGTTGTAGACGGGCTGTTGGCTCTCACTGCCGAGGAGCTCCCTGCATTCATCACAGCCAGATGT
ATCAACATCACAAGCAAGATCGTGGAGGAGCGAGTCCGAGGAACCTTGCCAATGAAGTTTCGCGGGACTTCGAAT
GCACTGGCAGAAGTATTTTGCCTGACAGACCCATCGCGACCTGACAATCCAATTATTTTCGCATCAGAAGAGTTC
CACAGAACAACTCAGTACGGCATGGATTACGTGCTTGGTCGAAATTGTCGCTTTTTACAAGGCCCGAAGACAAAT
GCGAACAGTGTTCGTCGACTTCGCGAAGCTATTAACGCAGGCCGGCATCATTCAGAAATGTTTCTCAACTATCGT
CGTGACGGCTCTCCATTCATGAACCTGCTCCAGTGCGCACCTCTATGCGACAGCCACGGCCGTGTCAAATACTTC
ATCGGCGCACAGATCGATGTCTCGGGACTTGCAATGGAGGGAGCCTCGATGGAATCCTTGATGGAACTACAAAAC
AAATACCGCGATCCCGACGAAGAGAGCATTGCGGAGCCACCAGAAGCAGAAGAGAAGGATGAGTTCCGTGAGCTG
ACTGAACTGTTCAGTCCGCGGGAACTCTCCGCTGTTCAACAGTATGGTGGAAATCTGTTCCAACCTATGCAAAGC
CTCGCATATCCGCATCACCCGCGATCATGGTTCCAGCCCGACGCATCCTTAGAAAGAGAGACTGAAGCCGTCCGT
CTACGTGAGATGAAATCGCCCCTTTTCCGGATGTCATTTGCGGGCGTGTATGAGAACTATCTCCTCGTTCGACCA
TACCCTTCCCTCCGGATTCTGTTCACGTCGCCTGCCCTCCAGATCCCAGGCATGCTGCAATCACCATTTCTATCC
CGCATTGGCAGTTCCTCGGCAGTTAAAGATGACCTACTACAAACTATGAAAGTTGGGCGCAGTGTGACTGCGCGT
ATCAAGTGGACAACGCGTTCCAATCCCGACGGTCGCAATCGATGGGTCCATTGCACGCCTCTCCTTGCGAGTAAT
GGTCAAGTGGGTGTGTGGATGGTTGTAGTTGTGGATGATGGATGA
Gene >Pro_DTO377G3_2|g8004.t1
ATGACCTCCCATATTATCTCTGTACTTTGGCAGACTCTTTCCATCGTGTCCGTTGCATTCCTTGTAATGAAACCC
TGGAGAGTGCATGAAATGATGTATCATTCTGGAGGGGCGCCAGTGCCTAGGGAAGGATTTCCTACTATTAAAGAA
AAGGTCTGTTTCCAGGACGTTATACAGCCGGATCTCGTATTTTCTTTACTCAAACAATGTCGCATACAGATCTCC
GTGGCCTCCAGGGGCTCCATGATGGGCTAAGAACCCCCGATGCAGAGTCATTGCGCTCATTCACTGAGACTATTC
AAGACGAATACCACGAATGGGTCAGCGAGTCCGGTCGATTGTCACAGTACGTTGAACTCAAGGTGGTAGGTTTCA
CTGAATGCGCTGACAAGACAGGACTGATCAATTATTGGACAACTTCCCCCATCCACCGAGGTTGGAAAGTCTAAA
TGCAATTCACGAGGAAGAGATGGAAGCGTATCCCACACCAAATCCTTCTATCAAGAATCTGCGTCGACATGCGAC
GGCCAATGAGCTTCCTCTTCTACAGCAAATCAATCCGAATGAGGGAGCACCAGAGTTTAACCCCGTCAGCGAAGA
GACCGGCTCATACGATCTCATTGCGCCCTACGATGGCGGCGATCTACCACTCTACAAGCTGGAAAGAATTGCCGA
CATCATGTTTTCGTCCGAACATATGCTCACAATCCTAAATAACCCCCGGTATCTAGCTCGATTTCGTGACTTTAT
TCTCGAAGAGCGGCCGCGCTCCATTTCTACCCTCACATACTACCTCAACGCCTCCAAAGCGCTTAAGGCAATTGA
ATATGCTAATGCGCTCGTCCGCCTCTCTATTGATGTGCCTCCCCCAGCAGTCCGGACGGACGGGGAAGCCGCCGG
GGTGACGGTGAACCGTGTTTTGGAGCGGCGTGTTGTAGACGGGCTGTTGGCTCTCACTGCCGAGGAGCTCCCTGC
ATTCATCACAGCCAGATGTATCAACATCACAAGCAAGATCGTGGAGGAGCGAGTCCGAGGAACCTTGCCAATGAA
GTTTCGCGGGACTTCGAATGCACTGGCAGAAGTATTTTGCCTGACAGACCCATCGCGACCTGACAATCCAATTAT
TTTCGCATCAGAAGGTATGTTTTTCTTTCCCCAGCTCGTTTTCCGAATCGAACTAACAAAATCAGAGTTCCACAG
AACAACTCAGTACGGCATGGATTACGTGCTTGGTCGAAATTGTCGCTTTTTACAAGGCCCGAAGACAAATGCGAA
CAGTGTTCGTCGACTTCGCGAAGCTATTAACGCAGGCCGGCATCATTCAGAAATGTTTCTCAACTAGTATGCTCT
ATAACTCAGCCTTTAGCCAATATAGTCACCCAGATAACTAACATAACCAGTCGTCGTGACGGCTCTCCATTCATG
AACCTGCTCCAGTGCGCACCTCTATGCGACAGCCACGGCCGTGTCAAATACTTCATCGGCGCACAGATCGATGTC
TCGGGACTTGCAATGGAGGGAGCCTCGATGGAATCCTTGATGGAACTACAAAACAAATACCGCGATCCCGACGAA
GAGAGCATTGCGGAGCCACCAGAAGCAGAAGAGAAGGATGAGTTCCGTGAGCTGACTGAACTGTTCAGTCCGCGG
GAACTCTCCGCTGTTCAACAGTATGGTGGAAATCTGTTCCAACCTATGCAAAGCCTCGCATATCCGCATCACCCG
CGATCATGGTTCCAGCCCGACGCATCCTTAGAAAGAGAGACTGAAGCCGTCCGTCTACGTGAGATGAAATCGCCC
CTTTTCCGGATGTCATTTGCGGGCGTGTATGAGAACGTAAGAGATGAGATGTTTATTTGCAAACTTCATGGCACA
GACTAACATAATACATGATACAGTATCTCCTCGTTCGACCATACCCTTCCCTCCGGATTCTGTTCACGTCGCCTG
CCCTCCAGATCCCAGGCATGCTGCAATCACCATTTCTATCCCGCATTGGCAGTTCCTCGGCAGTTAAAGATGACC
TACTACAAACTATGAAAGTTGGGCGCAGTGTGACTGCGCGTATCAAGTGGACAACGCGTTCCAATCCCGACGGTC
GCAATCGATGGGTCCATTGCACGCCTCTCCTTGCGAGTAATGGTCAAGTGGGTGTGTGGATGGTTGTAGTTGTGG
ATGATGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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