Protein ID | Pro_DTO377G3_2|g7996.t1 |
Gene name | |
Location | scaffold_28:77835..78651 |
Strand | + |
Gene length (bp) | 816 |
Transcript length (bp) | 816 |
Coding sequence length (bp) | 816 |
Protein length (aa) | 272 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 3.0E-62 | 11 | 269 |
PF00106 | adh_short | short chain dehydrogenase | 9.0E-49 | 6 | 216 |
PF08659 | KR | KR domain | 3.3E-12 | 5 | 182 |
PF02719 | Polysacc_synt_2 | Polysaccharide biosynthesis protein | 1.4E-06 | 8 | 138 |
Orthofinder run ID | 2 |
Orthogroup | 7282 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g7996.t1 MDVSGIALITGAASGIGRACAKTFARDGASGIALLDIGPEALEAVKAEIEEQQRGLGLKPCRVITYPTNVTDENR VNHVVQEVATTFGRLDYVVNAAGIAMKHAGGAAFCETSDWERILNVNLTGTFFVLRAAAKIMLKQEPIRSSIDGR PLQRGSIVNFSSIQGVAGIALSTAYTATKHAVIGLTRTASEDYAKDGLRINAICPGYTETPLTTKSPQIFAAMQE KVANAVPMERMGRPEEIADGVVYLSGGRASFVTGTALFVDGGYTQR* |
Coding | >Pro_DTO377G3_2|g7996.t1 ATGGATGTATCTGGAATTGCCCTTATCACAGGTGCAGCCTCGGGCATTGGCCGCGCCTGTGCAAAGACATTCGCC AGAGATGGAGCCTCGGGAATCGCCCTACTCGACATCGGCCCTGAAGCCCTGGAGGCTGTGAAAGCCGAGATCGAA GAACAACAGCGCGGACTAGGATTAAAGCCATGCCGGGTCATCACCTACCCCACCAATGTAACAGATGAGAACCGC GTCAACCATGTCGTCCAAGAAGTCGCGACGACATTCGGCCGACTCGACTACGTCGTCAATGCAGCCGGAATCGCA ATGAAGCACGCAGGCGGAGCTGCATTCTGCGAGACATCGGATTGGGAGCGTATCTTGAACGTCAACCTCACGGGT ACATTCTTCGTTTTGCGAGCTGCTGCCAAGATCATGTTGAAGCAGGAGCCTATCCGGTCTTCGATTGATGGCAGG CCACTGCAGCGGGGCTCAATTGTCAACTTCTCGTCTATTCAGGGCGTCGCTGGGATTGCGTTGTCGACTGCGTAC ACTGCGACGAAGCATGCGGTTATTGGTTTGACGAGGACTGCCTCGGAGGATTATGCAAAGGATGGGTTGCGCATC AACGCTATCTGTCCTGGGTATACCGAGACCCCGTTGACGACCAAGTCGCCCCAGATCTTCGCGGCTATGCAGGAG AAAGTTGCTAATGCGGTTCCAATGGAGCGTATGGGTCGGCCGGAGGAGATCGCCGACGGTGTTGTTTACTTGAGT GGTGGACGGGCTTCTTTTGTTACTGGGACGGCTTTATTCGTGGATGGTGGGTACACGCAGCGATGA |
Transcript | >Pro_DTO377G3_2|g7996.t1 ATGGATGTATCTGGAATTGCCCTTATCACAGGTGCAGCCTCGGGCATTGGCCGCGCCTGTGCAAAGACATTCGCC AGAGATGGAGCCTCGGGAATCGCCCTACTCGACATCGGCCCTGAAGCCCTGGAGGCTGTGAAAGCCGAGATCGAA GAACAACAGCGCGGACTAGGATTAAAGCCATGCCGGGTCATCACCTACCCCACCAATGTAACAGATGAGAACCGC GTCAACCATGTCGTCCAAGAAGTCGCGACGACATTCGGCCGACTCGACTACGTCGTCAATGCAGCCGGAATCGCA ATGAAGCACGCAGGCGGAGCTGCATTCTGCGAGACATCGGATTGGGAGCGTATCTTGAACGTCAACCTCACGGGT ACATTCTTCGTTTTGCGAGCTGCTGCCAAGATCATGTTGAAGCAGGAGCCTATCCGGTCTTCGATTGATGGCAGG CCACTGCAGCGGGGCTCAATTGTCAACTTCTCGTCTATTCAGGGCGTCGCTGGGATTGCGTTGTCGACTGCGTAC ACTGCGACGAAGCATGCGGTTATTGGTTTGACGAGGACTGCCTCGGAGGATTATGCAAAGGATGGGTTGCGCATC AACGCTATCTGTCCTGGGTATACCGAGACCCCGTTGACGACCAAGTCGCCCCAGATCTTCGCGGCTATGCAGGAG AAAGTTGCTAATGCGGTTCCAATGGAGCGTATGGGTCGGCCGGAGGAGATCGCCGACGGTGTTGTTTACTTGAGT GGTGGACGGGCTTCTTTTGTTACTGGGACGGCTTTATTCGTGGATGGTGGGTACACGCAGCGATGA |
Gene | >Pro_DTO377G3_2|g7996.t1 ATGGATGTATCTGGAATTGCCCTTATCACAGGTGCAGCCTCGGGCATTGGCCGCGCCTGTGCAAAGACATTCGCC AGAGATGGAGCCTCGGGAATCGCCCTACTCGACATCGGCCCTGAAGCCCTGGAGGCTGTGAAAGCCGAGATCGAA GAACAACAGCGCGGACTAGGATTAAAGCCATGCCGGGTCATCACCTACCCCACCAATGTAACAGATGAGAACCGC GTCAACCATGTCGTCCAAGAAGTCGCGACGACATTCGGCCGACTCGACTACGTCGTCAATGCAGCCGGAATCGCA ATGAAGCACGCAGGCGGAGCTGCATTCTGCGAGACATCGGATTGGGAGCGTATCTTGAACGTCAACCTCACGGGT ACATTCTTCGTTTTGCGAGCTGCTGCCAAGATCATGTTGAAGCAGGAGCCTATCCGGTCTTCGATTGATGGCAGG CCACTGCAGCGGGGCTCAATTGTCAACTTCTCGTCTATTCAGGGCGTCGCTGGGATTGCGTTGTCGACTGCGTAC ACTGCGACGAAGCATGCGGTTATTGGTTTGACGAGGACTGCCTCGGAGGATTATGCAAAGGATGGGTTGCGCATC AACGCTATCTGTCCTGGGTATACCGAGACCCCGTTGACGACCAAGTCGCCCCAGATCTTCGCGGCTATGCAGGAG AAAGTTGCTAATGCGGTTCCAATGGAGCGTATGGGTCGGCCGGAGGAGATCGCCGACGGTGTTGTTTACTTGAGT GGTGGACGGGCTTCTTTTGTTACTGGGACGGCTTTATTCGTGGATGGTGGGTACACGCAGCGATGA |