Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7985.t1
Gene name
Locationscaffold_28:51513..52815
Strand-
Gene length (bp)1302
Transcript length (bp)1302
Coding sequence length (bp)1302
Protein length (aa) 434

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01300 Sua5_yciO_yrdC Telomere recombination 4.3E-55 51 239
PF03481 SUA5 Putative GTP-binding controlling metal-binding 2.3E-31 244 428

GO

GO Term Description Terminal node
GO:0003725 double-stranded RNA binding Yes
GO:0097159 organic cyclic compound binding No
GO:0003674 molecular_function No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003723 RNA binding No
GO:0003676 nucleic acid binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7985.t1
MSIQTRVVPVQRLSQGPGDLSLAEWWEKERSQKTPESQAIEEAAKLLRSSDIPVAFPTETVYGLGADATRSSSVQ
GIYRAKQRPSDNPLIVHVDSLDMLERLLNPTSQGSPKSTRMLPMALPSIYKPLIDRFWPGALTIILPNPSGSILA
PEVTSNLTTFGVRMPSSPLARLLIHVTDRPLAAPSANASTKPSPTTAQHVYHDLKDRIEMILDGGASGVGVESTV
VDGLCDPPAILRPGGVGIDEIRKCAGWENVALGYKDGTLDVKDVPRAPGMKYRHYSPKARVVLFDSTSNLVGVMK
HVQKDLKDTAIGAHKIGIIRTRNWQLGLGLASEDDIANTMTPVSSAIENIVSVPIQIPVLENGKPSSRTKIAYDY
HLGSDAVSIAHGLFAALRALDELNVDVIYVEGVSDCEGDLAAAVMNRLRKAAGAEMRV*
Coding >Pro_DTO377G3_2|g7985.t1
ATGTCTATACAAACGCGGGTTGTCCCCGTCCAACGGCTCAGCCAAGGGCCTGGCGATTTATCTCTGGCGGAATGG
TGGGAGAAGGAGCGCAGCCAAAAAACGCCCGAGTCCCAGGCCATCGAAGAAGCTGCCAAACTTCTCCGGTCTAGT
GACATCCCCGTTGCCTTTCCTACCGAAACTGTATATGGCCTAGGAGCCGATGCCACGCGCAGTTCTTCTGTCCAG
GGAATCTACCGAGCCAAACAGCGGCCCTCGGACAACCCGTTGATCGTTCATGTCGACTCACTGGACATGCTTGAG
CGTCTGCTTAATCCTACCTCCCAAGGCAGCCCTAAATCAACCAGAATGCTGCCAATGGCCCTCCCTTCAATCTAC
AAGCCTCTGATCGACAGATTCTGGCCCGGCGCACTGACCATCATTTTACCTAACCCATCCGGGTCCATATTGGCG
CCAGAGGTCACCTCCAACCTGACCACATTCGGCGTCCGCATGCCCTCTTCTCCACTGGCGCGTCTACTCATCCAC
GTAACAGATCGCCCCCTCGCCGCGCCATCTGCCAATGCGTCCACTAAACCATCCCCCACAACCGCGCAGCACGTA
TACCACGATCTCAAAGACCGCATTGAGATGATTCTCGATGGAGGAGCATCCGGCGTTGGTGTTGAAAGCACCGTG
GTGGACGGGTTATGCGACCCACCGGCGATTCTGCGCCCCGGCGGCGTCGGCATTGATGAAATCCGGAAATGCGCA
GGGTGGGAAAATGTAGCACTCGGCTACAAAGACGGCACGCTAGACGTGAAAGATGTTCCACGCGCACCGGGCATG
AAGTACCGCCACTACTCGCCAAAAGCACGAGTTGTACTCTTCGATTCGACATCCAACCTAGTTGGAGTGATGAAG
CATGTCCAAAAGGACTTGAAAGACACAGCCATTGGCGCACACAAAATTGGTATTATCCGCACGCGGAATTGGCAG
CTCGGCTTGGGGCTCGCTTCAGAAGATGACATCGCCAATACCATGACCCCCGTGTCTTCTGCCATTGAGAACATT
GTCAGTGTCCCGATCCAAATCCCCGTGCTGGAGAATGGAAAACCCAGTAGCCGTACGAAGATAGCATACGATTAC
CATCTTGGCTCAGATGCGGTCTCCATCGCGCATGGTCTCTTTGCCGCCCTGCGCGCGTTGGACGAGCTTAATGTC
GATGTCATCTACGTGGAAGGCGTGTCAGATTGCGAGGGTGATCTGGCCGCTGCTGTCATGAACAGGCTACGGAAG
GCTGCTGGTGCTGAAATGCGGGTTTAG
Transcript >Pro_DTO377G3_2|g7985.t1
ATGTCTATACAAACGCGGGTTGTCCCCGTCCAACGGCTCAGCCAAGGGCCTGGCGATTTATCTCTGGCGGAATGG
TGGGAGAAGGAGCGCAGCCAAAAAACGCCCGAGTCCCAGGCCATCGAAGAAGCTGCCAAACTTCTCCGGTCTAGT
GACATCCCCGTTGCCTTTCCTACCGAAACTGTATATGGCCTAGGAGCCGATGCCACGCGCAGTTCTTCTGTCCAG
GGAATCTACCGAGCCAAACAGCGGCCCTCGGACAACCCGTTGATCGTTCATGTCGACTCACTGGACATGCTTGAG
CGTCTGCTTAATCCTACCTCCCAAGGCAGCCCTAAATCAACCAGAATGCTGCCAATGGCCCTCCCTTCAATCTAC
AAGCCTCTGATCGACAGATTCTGGCCCGGCGCACTGACCATCATTTTACCTAACCCATCCGGGTCCATATTGGCG
CCAGAGGTCACCTCCAACCTGACCACATTCGGCGTCCGCATGCCCTCTTCTCCACTGGCGCGTCTACTCATCCAC
GTAACAGATCGCCCCCTCGCCGCGCCATCTGCCAATGCGTCCACTAAACCATCCCCCACAACCGCGCAGCACGTA
TACCACGATCTCAAAGACCGCATTGAGATGATTCTCGATGGAGGAGCATCCGGCGTTGGTGTTGAAAGCACCGTG
GTGGACGGGTTATGCGACCCACCGGCGATTCTGCGCCCCGGCGGCGTCGGCATTGATGAAATCCGGAAATGCGCA
GGGTGGGAAAATGTAGCACTCGGCTACAAAGACGGCACGCTAGACGTGAAAGATGTTCCACGCGCACCGGGCATG
AAGTACCGCCACTACTCGCCAAAAGCACGAGTTGTACTCTTCGATTCGACATCCAACCTAGTTGGAGTGATGAAG
CATGTCCAAAAGGACTTGAAAGACACAGCCATTGGCGCACACAAAATTGGTATTATCCGCACGCGGAATTGGCAG
CTCGGCTTGGGGCTCGCTTCAGAAGATGACATCGCCAATACCATGACCCCCGTGTCTTCTGCCATTGAGAACATT
GTCAGTGTCCCGATCCAAATCCCCGTGCTGGAGAATGGAAAACCCAGTAGCCGTACGAAGATAGCATACGATTAC
CATCTTGGCTCAGATGCGGTCTCCATCGCGCATGGTCTCTTTGCCGCCCTGCGCGCGTTGGACGAGCTTAATGTC
GATGTCATCTACGTGGAAGGCGTGTCAGATTGCGAGGGTGATCTGGCCGCTGCTGTCATGAACAGGCTACGGAAG
GCTGCTGGTGCTGAAATGCGGGTTTAG
Gene >Pro_DTO377G3_2|g7985.t1
ATGTCTATACAAACGCGGGTTGTCCCCGTCCAACGGCTCAGCCAAGGGCCTGGCGATTTATCTCTGGCGGAATGG
TGGGAGAAGGAGCGCAGCCAAAAAACGCCCGAGTCCCAGGCCATCGAAGAAGCTGCCAAACTTCTCCGGTCTAGT
GACATCCCCGTTGCCTTTCCTACCGAAACTGTATATGGCCTAGGAGCCGATGCCACGCGCAGTTCTTCTGTCCAG
GGAATCTACCGAGCCAAACAGCGGCCCTCGGACAACCCGTTGATCGTTCATGTCGACTCACTGGACATGCTTGAG
CGTCTGCTTAATCCTACCTCCCAAGGCAGCCCTAAATCAACCAGAATGCTGCCAATGGCCCTCCCTTCAATCTAC
AAGCCTCTGATCGACAGATTCTGGCCCGGCGCACTGACCATCATTTTACCTAACCCATCCGGGTCCATATTGGCG
CCAGAGGTCACCTCCAACCTGACCACATTCGGCGTCCGCATGCCCTCTTCTCCACTGGCGCGTCTACTCATCCAC
GTAACAGATCGCCCCCTCGCCGCGCCATCTGCCAATGCGTCCACTAAACCATCCCCCACAACCGCGCAGCACGTA
TACCACGATCTCAAAGACCGCATTGAGATGATTCTCGATGGAGGAGCATCCGGCGTTGGTGTTGAAAGCACCGTG
GTGGACGGGTTATGCGACCCACCGGCGATTCTGCGCCCCGGCGGCGTCGGCATTGATGAAATCCGGAAATGCGCA
GGGTGGGAAAATGTAGCACTCGGCTACAAAGACGGCACGCTAGACGTGAAAGATGTTCCACGCGCACCGGGCATG
AAGTACCGCCACTACTCGCCAAAAGCACGAGTTGTACTCTTCGATTCGACATCCAACCTAGTTGGAGTGATGAAG
CATGTCCAAAAGGACTTGAAAGACACAGCCATTGGCGCACACAAAATTGGTATTATCCGCACGCGGAATTGGCAG
CTCGGCTTGGGGCTCGCTTCAGAAGATGACATCGCCAATACCATGACCCCCGTGTCTTCTGCCATTGAGAACATT
GTCAGTGTCCCGATCCAAATCCCCGTGCTGGAGAATGGAAAACCCAGTAGCCGTACGAAGATAGCATACGATTAC
CATCTTGGCTCAGATGCGGTCTCCATCGCGCATGGTCTCTTTGCCGCCCTGCGCGCGTTGGACGAGCTTAATGTC
GATGTCATCTACGTGGAAGGCGTGTCAGATTGCGAGGGTGATCTGGCCGCTGCTGTCATGAACAGGCTACGGAAG
GCTGCTGGTGCTGAAATGCGGGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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