Protein ID | Pro_DTO377G3_2|g7985.t1 |
Gene name | |
Location | scaffold_28:51513..52815 |
Strand | - |
Gene length (bp) | 1302 |
Transcript length (bp) | 1302 |
Coding sequence length (bp) | 1302 |
Protein length (aa) | 434 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01300 | Sua5_yciO_yrdC | Telomere recombination | 4.3E-55 | 51 | 239 |
PF03481 | SUA5 | Putative GTP-binding controlling metal-binding | 2.3E-31 | 244 | 428 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003725 | double-stranded RNA binding | Yes |
GO:0097159 | organic cyclic compound binding | No |
GO:0003674 | molecular_function | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0005488 | binding | No |
GO:0003723 | RNA binding | No |
GO:0003676 | nucleic acid binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 32 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g7985.t1 MSIQTRVVPVQRLSQGPGDLSLAEWWEKERSQKTPESQAIEEAAKLLRSSDIPVAFPTETVYGLGADATRSSSVQ GIYRAKQRPSDNPLIVHVDSLDMLERLLNPTSQGSPKSTRMLPMALPSIYKPLIDRFWPGALTIILPNPSGSILA PEVTSNLTTFGVRMPSSPLARLLIHVTDRPLAAPSANASTKPSPTTAQHVYHDLKDRIEMILDGGASGVGVESTV VDGLCDPPAILRPGGVGIDEIRKCAGWENVALGYKDGTLDVKDVPRAPGMKYRHYSPKARVVLFDSTSNLVGVMK HVQKDLKDTAIGAHKIGIIRTRNWQLGLGLASEDDIANTMTPVSSAIENIVSVPIQIPVLENGKPSSRTKIAYDY HLGSDAVSIAHGLFAALRALDELNVDVIYVEGVSDCEGDLAAAVMNRLRKAAGAEMRV* |
Coding | >Pro_DTO377G3_2|g7985.t1 ATGTCTATACAAACGCGGGTTGTCCCCGTCCAACGGCTCAGCCAAGGGCCTGGCGATTTATCTCTGGCGGAATGG TGGGAGAAGGAGCGCAGCCAAAAAACGCCCGAGTCCCAGGCCATCGAAGAAGCTGCCAAACTTCTCCGGTCTAGT GACATCCCCGTTGCCTTTCCTACCGAAACTGTATATGGCCTAGGAGCCGATGCCACGCGCAGTTCTTCTGTCCAG GGAATCTACCGAGCCAAACAGCGGCCCTCGGACAACCCGTTGATCGTTCATGTCGACTCACTGGACATGCTTGAG CGTCTGCTTAATCCTACCTCCCAAGGCAGCCCTAAATCAACCAGAATGCTGCCAATGGCCCTCCCTTCAATCTAC AAGCCTCTGATCGACAGATTCTGGCCCGGCGCACTGACCATCATTTTACCTAACCCATCCGGGTCCATATTGGCG CCAGAGGTCACCTCCAACCTGACCACATTCGGCGTCCGCATGCCCTCTTCTCCACTGGCGCGTCTACTCATCCAC GTAACAGATCGCCCCCTCGCCGCGCCATCTGCCAATGCGTCCACTAAACCATCCCCCACAACCGCGCAGCACGTA TACCACGATCTCAAAGACCGCATTGAGATGATTCTCGATGGAGGAGCATCCGGCGTTGGTGTTGAAAGCACCGTG GTGGACGGGTTATGCGACCCACCGGCGATTCTGCGCCCCGGCGGCGTCGGCATTGATGAAATCCGGAAATGCGCA GGGTGGGAAAATGTAGCACTCGGCTACAAAGACGGCACGCTAGACGTGAAAGATGTTCCACGCGCACCGGGCATG AAGTACCGCCACTACTCGCCAAAAGCACGAGTTGTACTCTTCGATTCGACATCCAACCTAGTTGGAGTGATGAAG CATGTCCAAAAGGACTTGAAAGACACAGCCATTGGCGCACACAAAATTGGTATTATCCGCACGCGGAATTGGCAG CTCGGCTTGGGGCTCGCTTCAGAAGATGACATCGCCAATACCATGACCCCCGTGTCTTCTGCCATTGAGAACATT GTCAGTGTCCCGATCCAAATCCCCGTGCTGGAGAATGGAAAACCCAGTAGCCGTACGAAGATAGCATACGATTAC CATCTTGGCTCAGATGCGGTCTCCATCGCGCATGGTCTCTTTGCCGCCCTGCGCGCGTTGGACGAGCTTAATGTC GATGTCATCTACGTGGAAGGCGTGTCAGATTGCGAGGGTGATCTGGCCGCTGCTGTCATGAACAGGCTACGGAAG GCTGCTGGTGCTGAAATGCGGGTTTAG |
Transcript | >Pro_DTO377G3_2|g7985.t1 ATGTCTATACAAACGCGGGTTGTCCCCGTCCAACGGCTCAGCCAAGGGCCTGGCGATTTATCTCTGGCGGAATGG TGGGAGAAGGAGCGCAGCCAAAAAACGCCCGAGTCCCAGGCCATCGAAGAAGCTGCCAAACTTCTCCGGTCTAGT GACATCCCCGTTGCCTTTCCTACCGAAACTGTATATGGCCTAGGAGCCGATGCCACGCGCAGTTCTTCTGTCCAG GGAATCTACCGAGCCAAACAGCGGCCCTCGGACAACCCGTTGATCGTTCATGTCGACTCACTGGACATGCTTGAG CGTCTGCTTAATCCTACCTCCCAAGGCAGCCCTAAATCAACCAGAATGCTGCCAATGGCCCTCCCTTCAATCTAC AAGCCTCTGATCGACAGATTCTGGCCCGGCGCACTGACCATCATTTTACCTAACCCATCCGGGTCCATATTGGCG CCAGAGGTCACCTCCAACCTGACCACATTCGGCGTCCGCATGCCCTCTTCTCCACTGGCGCGTCTACTCATCCAC GTAACAGATCGCCCCCTCGCCGCGCCATCTGCCAATGCGTCCACTAAACCATCCCCCACAACCGCGCAGCACGTA TACCACGATCTCAAAGACCGCATTGAGATGATTCTCGATGGAGGAGCATCCGGCGTTGGTGTTGAAAGCACCGTG GTGGACGGGTTATGCGACCCACCGGCGATTCTGCGCCCCGGCGGCGTCGGCATTGATGAAATCCGGAAATGCGCA GGGTGGGAAAATGTAGCACTCGGCTACAAAGACGGCACGCTAGACGTGAAAGATGTTCCACGCGCACCGGGCATG AAGTACCGCCACTACTCGCCAAAAGCACGAGTTGTACTCTTCGATTCGACATCCAACCTAGTTGGAGTGATGAAG CATGTCCAAAAGGACTTGAAAGACACAGCCATTGGCGCACACAAAATTGGTATTATCCGCACGCGGAATTGGCAG CTCGGCTTGGGGCTCGCTTCAGAAGATGACATCGCCAATACCATGACCCCCGTGTCTTCTGCCATTGAGAACATT GTCAGTGTCCCGATCCAAATCCCCGTGCTGGAGAATGGAAAACCCAGTAGCCGTACGAAGATAGCATACGATTAC CATCTTGGCTCAGATGCGGTCTCCATCGCGCATGGTCTCTTTGCCGCCCTGCGCGCGTTGGACGAGCTTAATGTC GATGTCATCTACGTGGAAGGCGTGTCAGATTGCGAGGGTGATCTGGCCGCTGCTGTCATGAACAGGCTACGGAAG GCTGCTGGTGCTGAAATGCGGGTTTAG |
Gene | >Pro_DTO377G3_2|g7985.t1 ATGTCTATACAAACGCGGGTTGTCCCCGTCCAACGGCTCAGCCAAGGGCCTGGCGATTTATCTCTGGCGGAATGG TGGGAGAAGGAGCGCAGCCAAAAAACGCCCGAGTCCCAGGCCATCGAAGAAGCTGCCAAACTTCTCCGGTCTAGT GACATCCCCGTTGCCTTTCCTACCGAAACTGTATATGGCCTAGGAGCCGATGCCACGCGCAGTTCTTCTGTCCAG GGAATCTACCGAGCCAAACAGCGGCCCTCGGACAACCCGTTGATCGTTCATGTCGACTCACTGGACATGCTTGAG CGTCTGCTTAATCCTACCTCCCAAGGCAGCCCTAAATCAACCAGAATGCTGCCAATGGCCCTCCCTTCAATCTAC AAGCCTCTGATCGACAGATTCTGGCCCGGCGCACTGACCATCATTTTACCTAACCCATCCGGGTCCATATTGGCG CCAGAGGTCACCTCCAACCTGACCACATTCGGCGTCCGCATGCCCTCTTCTCCACTGGCGCGTCTACTCATCCAC GTAACAGATCGCCCCCTCGCCGCGCCATCTGCCAATGCGTCCACTAAACCATCCCCCACAACCGCGCAGCACGTA TACCACGATCTCAAAGACCGCATTGAGATGATTCTCGATGGAGGAGCATCCGGCGTTGGTGTTGAAAGCACCGTG GTGGACGGGTTATGCGACCCACCGGCGATTCTGCGCCCCGGCGGCGTCGGCATTGATGAAATCCGGAAATGCGCA GGGTGGGAAAATGTAGCACTCGGCTACAAAGACGGCACGCTAGACGTGAAAGATGTTCCACGCGCACCGGGCATG AAGTACCGCCACTACTCGCCAAAAGCACGAGTTGTACTCTTCGATTCGACATCCAACCTAGTTGGAGTGATGAAG CATGTCCAAAAGGACTTGAAAGACACAGCCATTGGCGCACACAAAATTGGTATTATCCGCACGCGGAATTGGCAG CTCGGCTTGGGGCTCGCTTCAGAAGATGACATCGCCAATACCATGACCCCCGTGTCTTCTGCCATTGAGAACATT GTCAGTGTCCCGATCCAAATCCCCGTGCTGGAGAATGGAAAACCCAGTAGCCGTACGAAGATAGCATACGATTAC CATCTTGGCTCAGATGCGGTCTCCATCGCGCATGGTCTCTTTGCCGCCCTGCGCGCGTTGGACGAGCTTAATGTC GATGTCATCTACGTGGAAGGCGTGTCAGATTGCGAGGGTGATCTGGCCGCTGCTGTCATGAACAGGCTACGGAAG GCTGCTGGTGCTGAAATGCGGGTTTAG |