Protein ID | Pro_DTO377G3_2|g7972.t1 |
Gene name | |
Location | scaffold_28:16338..19704 |
Strand | + |
Gene length (bp) | 3366 |
Transcript length (bp) | 2832 |
Coding sequence length (bp) | 2832 |
Protein length (aa) | 944 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00270 | DEAD | DEAD/DEAH box helicase | 2.5E-16 | 164 | 340 |
PF04851 | ResIII | Type III restriction enzyme, res subunit | 2.2E-08 | 165 | 337 |
PF00271 | Helicase_C | Helicase conserved C-terminal domain | 4.7E-07 | 493 | 563 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003676 | nucleic acid binding | Yes |
GO:0016787 | hydrolase activity | Yes |
GO:0003677 | DNA binding | Yes |
GO:0005524 | ATP binding | Yes |
GO:0030554 | adenyl nucleotide binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0003824 | catalytic activity | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0043168 | anion binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0017076 | purine nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0008144 | drug binding | No |
GO:0003674 | molecular_function | No |
GO:0000166 | nucleotide binding | No |
GO:0043167 | ion binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0005488 | binding | No |
GO:0036094 | small molecule binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g7972.t1 MSTTGHQVQSRGFQTSIDLARRQAYHVAPVAGQKRPPTEPTEQVLDIPPGPVVKQATFPRQNGNTDTILESAPLQ SARDLLIAPVHRFTASKIHLGAGAGAEPTSDDPPKAVAPTAPPSSQNPLLSLSNPKYGLPPALTANFAALGVRNI YPWQASCLLARGLLSGERHLVYTAPTGGGKSLVADVLLLKRIIENPGRKALLVLPYVALVQEKLKWMRRIVQDVE RNIPDDDENDSKFPCRRWNKLHKNIRVTGFFGGSRTTASWADTDIAVCTIEKANSLINNTIEECSVGDLGVVVLD ELHMLDDEHRGYLLELMVTKLLLLQQDTQIVGMSATLSNTEVLAQWMNAKFYISTYKPIPIEEYLVYENGIYPAA TSRQLFHTASKLTAAASLHDTIPPHRIIEPSTSKQLSNPATNAMVALAVETAAAGFGSLVFCGSRNACQIHAATI GEAMPPAEPEELNKRLDLLAELRSLACGLDPALETTIIRGTGFHNAGMTTEERELIAQAYDQGVLKVLVATCSLA AGVNLPARRVIINGARMGRQLVGPAMFRQMCGRAGRKGKDNAGETYLICVKADMQAVCDLLDADMPAIESCLAPE KRGLKRALLEAVATGLVSGCEAIKEYVRCTLLYQTLDKKIAYSIMKSALQELVDEDLLILRNDESYEATPLGQAI VASAFSPEDGLFVHEELKRALQAFVMDGDMHIFYMFTPLQAAVNTPIDWQIFRDQLDRLDESGLRALQLVGVQPG FVNTMAQSGASLKENTAVQIKQARIYCRAYTALQLRDLSNEVPISTIAQRYNTPRGAVQTLAQQCHGFAAGMVKF CQRMNWGMMAAVLDHMRDRLEAGARADLLEMAQVTFVKSWTARLLRDNGFKNLRALAEAEPKDLVPVLMMANPRK AQKSQLYPTETERYAAKLLVKAETIIAHATKIWEREMQFEVEE* |
Coding | >Pro_DTO377G3_2|g7972.t1 ATGTCGACAACGGGTCATCAAGTCCAGTCTCGCGGATTCCAGACATCCATTGATCTCGCCCGTCGACAAGCGTAT CATGTAGCGCCCGTGGCAGGACAGAAACGACCCCCGACAGAGCCCACAGAGCAGGTTCTCGACATCCCGCCCGGT CCAGTCGTAAAACAAGCTACTTTCCCTCGTCAAAATGGCAATACAGACACCATATTGGAATCAGCTCCGCTACAG TCTGCCCGAGATCTGCTAATCGCCCCCGTCCATCGCTTTACTGCCAGCAAGATTCATCTTGGCGCGGGCGCGGGC GCGGAGCCAACCTCGGATGATCCTCCAAAAGCTGTGGCACCGACCGCCCCACCTTCTAGTCAGAACCCCCTGCTC TCTCTGTCTAACCCAAAGTATGGTCTGCCGCCCGCTCTCACGGCGAATTTTGCCGCTCTCGGTGTTAGGAATATC TACCCATGGCAGGCATCTTGTCTGCTGGCCAGGGGCTTACTCTCCGGTGAACGTCATTTGGTTTACACGGCGCCA ACGGGCGGTGGCAAGTCTCTTGTTGCGGATGTTCTGCTTTTGAAACGCATTATCGAAAACCCAGGGCGCAAAGCG CTGTTGGTTTTGCCTTATGTTGCTTTGGTTCAGGAGAAGCTCAAGTGGATGCGTCGCATTGTGCAAGACGTGGAA AGAAATATCCCGGATGATGATGAAAATGACTCCAAATTTCCTTGCAGGCGATGGAACAAATTGCACAAGAATATC AGAGTGACGGGCTTCTTTGGCGGAAGTCGGACGACAGCCTCTTGGGCGGATACTGATATTGCCGTTTGTACGATA GAGAAGGCCAATTCGTTGATAAACAACACCATCGAAGAGTGTAGCGTTGGAGACCTGGGAGTCGTGGTTCTTGAC GAGTTACACATGCTCGATGACGAACACCGGGGCTATCTCTTGGAATTGATGGTCACGAAGCTGCTGTTATTACAG CAGGACACCCAGATTGTTGGGATGAGTGCTACACTCTCTAACACCGAAGTGCTGGCACAATGGATGAACGCCAAG TTCTACATCTCCACATACAAACCAATTCCTATTGAGGAATACTTGGTATACGAGAATGGAATCTACCCAGCTGCA ACCTCGCGGCAATTGTTCCATACGGCATCTAAGCTGACTGCAGCTGCGTCCCTACACGATACCATTCCTCCACAC CGAATAATTGAACCTTCTACCTCTAAGCAGCTCAGCAACCCTGCCACTAATGCCATGGTAGCGCTAGCTGTCGAA ACTGCAGCAGCTGGGTTTGGGTCATTGGTCTTTTGTGGCAGCCGTAACGCATGCCAAATTCACGCTGCGACTATC GGTGAAGCGATGCCGCCGGCGGAGCCGGAAGAGCTGAATAAACGACTCGACCTTCTTGCAGAATTGCGGAGCCTC GCTTGTGGACTGGACCCGGCTTTGGAGACAACAATAATCAGAGGGACAGGGTTTCACAATGCTGGGATGACCACC GAAGAGCGGGAGCTAATTGCACAGGCCTATGACCAGGGTGTGCTCAAAGTCCTCGTGGCCACGTGCAGTCTTGCC GCTGGTGTAAACCTCCCGGCGAGACGAGTTATCATCAATGGTGCGCGCATGGGGCGTCAATTAGTAGGTCCGGCT ATGTTTCGTCAAATGTGCGGTCGTGCTGGCCGCAAAGGCAAGGATAACGCTGGCGAGACCTATCTCATCTGCGTG AAAGCCGATATGCAGGCTGTCTGCGATCTGTTGGACGCTGATATGCCAGCTATTGAGAGCTGCCTGGCACCTGAG AAAAGAGGCCTCAAGCGGGCCTTACTCGAAGCCGTGGCAACGGGGTTGGTGTCCGGCTGCGAGGCGATCAAGGAA TATGTTCGGTGCACGCTTCTCTACCAAACGTTGGACAAGAAGATCGCATACAGCATCATGAAATCCGCTCTTCAG GAACTAGTCGACGAAGACCTTCTTATTTTGCGAAACGACGAATCCTACGAAGCCACACCATTAGGACAAGCAATC GTGGCTTCGGCATTTTCACCCGAAGACGGCCTGTTCGTTCACGAAGAGCTGAAACGAGCATTACAGGCCTTTGTC ATGGACGGTGACATGCACATCTTCTACATGTTCACTCCGCTCCAAGCAGCCGTGAACACCCCCATTGATTGGCAA ATCTTCCGCGATCAGCTAGACAGGCTAGATGAGAGCGGTCTCCGGGCTCTACAATTAGTCGGAGTCCAACCAGGT TTCGTCAACACAATGGCCCAATCAGGCGCCTCCCTGAAAGAAAACACCGCAGTCCAGATAAAACAAGCCCGCATC TACTGCCGCGCCTACACAGCCCTTCAACTCCGCGATCTCAGCAACGAAGTCCCCATATCAACGATAGCCCAACGC TACAACACCCCCCGCGGTGCAGTTCAAACCTTGGCACAGCAGTGCCACGGCTTCGCCGCCGGCATGGTCAAATTC TGTCAGCGCATGAACTGGGGCATGATGGCAGCCGTCTTGGATCATATGCGCGATAGGCTTGAGGCTGGCGCGCGC GCGGATCTGCTTGAGATGGCCCAGGTTACTTTTGTGAAGAGTTGGACGGCGCGTTTGCTCAGGGATAATGGATTT AAGAATTTGAGAGCTTTGGCGGAGGCTGAGCCGAAGGATTTGGTTCCTGTTCTTATGATGGCCAATCCTCGCAAA GCGCAGAAAAGTCAACTCTACCCGACAGAGACGGAGAGGTATGCTGCGAAATTGCTGGTCAAGGCTGAGACGATC ATTGCACATGCGACCAAGATCTGGGAGCGAGAGATGCAGTTCGAGGTGGAAGAATGA |
Transcript | >Pro_DTO377G3_2|g7972.t1 ATGTCGACAACGGGTCATCAAGTCCAGTCTCGCGGATTCCAGACATCCATTGATCTCGCCCGTCGACAAGCGTAT CATGTAGCGCCCGTGGCAGGACAGAAACGACCCCCGACAGAGCCCACAGAGCAGGTTCTCGACATCCCGCCCGGT CCAGTCGTAAAACAAGCTACTTTCCCTCGTCAAAATGGCAATACAGACACCATATTGGAATCAGCTCCGCTACAG TCTGCCCGAGATCTGCTAATCGCCCCCGTCCATCGCTTTACTGCCAGCAAGATTCATCTTGGCGCGGGCGCGGGC GCGGAGCCAACCTCGGATGATCCTCCAAAAGCTGTGGCACCGACCGCCCCACCTTCTAGTCAGAACCCCCTGCTC TCTCTGTCTAACCCAAAGTATGGTCTGCCGCCCGCTCTCACGGCGAATTTTGCCGCTCTCGGTGTTAGGAATATC TACCCATGGCAGGCATCTTGTCTGCTGGCCAGGGGCTTACTCTCCGGTGAACGTCATTTGGTTTACACGGCGCCA ACGGGCGGTGGCAAGTCTCTTGTTGCGGATGTTCTGCTTTTGAAACGCATTATCGAAAACCCAGGGCGCAAAGCG CTGTTGGTTTTGCCTTATGTTGCTTTGGTTCAGGAGAAGCTCAAGTGGATGCGTCGCATTGTGCAAGACGTGGAA AGAAATATCCCGGATGATGATGAAAATGACTCCAAATTTCCTTGCAGGCGATGGAACAAATTGCACAAGAATATC AGAGTGACGGGCTTCTTTGGCGGAAGTCGGACGACAGCCTCTTGGGCGGATACTGATATTGCCGTTTGTACGATA GAGAAGGCCAATTCGTTGATAAACAACACCATCGAAGAGTGTAGCGTTGGAGACCTGGGAGTCGTGGTTCTTGAC GAGTTACACATGCTCGATGACGAACACCGGGGCTATCTCTTGGAATTGATGGTCACGAAGCTGCTGTTATTACAG CAGGACACCCAGATTGTTGGGATGAGTGCTACACTCTCTAACACCGAAGTGCTGGCACAATGGATGAACGCCAAG TTCTACATCTCCACATACAAACCAATTCCTATTGAGGAATACTTGGTATACGAGAATGGAATCTACCCAGCTGCA ACCTCGCGGCAATTGTTCCATACGGCATCTAAGCTGACTGCAGCTGCGTCCCTACACGATACCATTCCTCCACAC CGAATAATTGAACCTTCTACCTCTAAGCAGCTCAGCAACCCTGCCACTAATGCCATGGTAGCGCTAGCTGTCGAA ACTGCAGCAGCTGGGTTTGGGTCATTGGTCTTTTGTGGCAGCCGTAACGCATGCCAAATTCACGCTGCGACTATC GGTGAAGCGATGCCGCCGGCGGAGCCGGAAGAGCTGAATAAACGACTCGACCTTCTTGCAGAATTGCGGAGCCTC GCTTGTGGACTGGACCCGGCTTTGGAGACAACAATAATCAGAGGGACAGGGTTTCACAATGCTGGGATGACCACC GAAGAGCGGGAGCTAATTGCACAGGCCTATGACCAGGGTGTGCTCAAAGTCCTCGTGGCCACGTGCAGTCTTGCC GCTGGTGTAAACCTCCCGGCGAGACGAGTTATCATCAATGGTGCGCGCATGGGGCGTCAATTAGTAGGTCCGGCT ATGTTTCGTCAAATGTGCGGTCGTGCTGGCCGCAAAGGCAAGGATAACGCTGGCGAGACCTATCTCATCTGCGTG AAAGCCGATATGCAGGCTGTCTGCGATCTGTTGGACGCTGATATGCCAGCTATTGAGAGCTGCCTGGCACCTGAG AAAAGAGGCCTCAAGCGGGCCTTACTCGAAGCCGTGGCAACGGGGTTGGTGTCCGGCTGCGAGGCGATCAAGGAA TATGTTCGGTGCACGCTTCTCTACCAAACGTTGGACAAGAAGATCGCATACAGCATCATGAAATCCGCTCTTCAG GAACTAGTCGACGAAGACCTTCTTATTTTGCGAAACGACGAATCCTACGAAGCCACACCATTAGGACAAGCAATC GTGGCTTCGGCATTTTCACCCGAAGACGGCCTGTTCGTTCACGAAGAGCTGAAACGAGCATTACAGGCCTTTGTC ATGGACGGTGACATGCACATCTTCTACATGTTCACTCCGCTCCAAGCAGCCGTGAACACCCCCATTGATTGGCAA ATCTTCCGCGATCAGCTAGACAGGCTAGATGAGAGCGGTCTCCGGGCTCTACAATTAGTCGGAGTCCAACCAGGT TTCGTCAACACAATGGCCCAATCAGGCGCCTCCCTGAAAGAAAACACCGCAGTCCAGATAAAACAAGCCCGCATC TACTGCCGCGCCTACACAGCCCTTCAACTCCGCGATCTCAGCAACGAAGTCCCCATATCAACGATAGCCCAACGC TACAACACCCCCCGCGGTGCAGTTCAAACCTTGGCACAGCAGTGCCACGGCTTCGCCGCCGGCATGGTCAAATTC TGTCAGCGCATGAACTGGGGCATGATGGCAGCCGTCTTGGATCATATGCGCGATAGGCTTGAGGCTGGCGCGCGC GCGGATCTGCTTGAGATGGCCCAGGTTACTTTTGTGAAGAGTTGGACGGCGCGTTTGCTCAGGGATAATGGATTT AAGAATTTGAGAGCTTTGGCGGAGGCTGAGCCGAAGGATTTGGTTCCTGTTCTTATGATGGCCAATCCTCGCAAA GCGCAGAAAAGTCAACTCTACCCGACAGAGACGGAGAGGTATGCTGCGAAATTGCTGGTCAAGGCTGAGACGATC ATTGCACATGCGACCAAGATCTGGGAGCGAGAGATGCAGTTCGAGGTGGAAGAATGA |
Gene | >Pro_DTO377G3_2|g7972.t1 ATGTCGACAACGGGTCATCAAGTCCAGTCTCGCGGATTCCAGACATCCATTGATCTCGCCCGTCGACAAGCGTAT CATGTAGCGCCCGTGGCAGGACAGAAACGACCCCCGACAGAGCCCACAGAGCAGGTTCTCGACATCCCGCCCGGT CCAGTCGTAAAACAAGCTACTTTCCCTCGTCAAAATGGCAATACAGACACCATATTGGAATCAGCTCCGCTACAG TCTGCCCGAGATCTGCTAATCGCCCCCGTCCATCGCTTTACTGCCAGCAAGATTCATCTTGGCGCGGGCGCGGGC GCGGAGCCAACCTCGGATGATCCTCCAAAAGCTGTGGCACCGACCGCCCCACCTTCTAGTCAGAACCCCCTGCTC TCTCTGTCTAACCCAAAGTATGGTCTGCCGCCCGCTCTCACGGCGAATTTTGCCGCTCTCGGTGTTAGGAATATC TACCCATGGCAGGCATCTTGTCTGCTGGCCAGGGGCTTACTCTCCGGTGAACGTCATTTGGTTTACACGGCGCCA ACGGGCGGTGGCAAGTCTCTTGTTGCGGATGTTCTGCTTTTGAAACGCATTATCGAAAACCCAGGGCGCAAAGCG CTGTTGGTTTTGCCTTATGTTGCTTTGGTTCAGGAGAAGCTCAAGTGGATGCGTCGCATTGTGCAAGACGTGGAA AGAAATATCCCGGATGATGATGAAAATGACTCCAAATTTCCTTGCAGGCGATGGAACAAATTGCACAAGAATATC AGAGTGACGGGCTTCTTTGGCGGAAGTCGGACGACAGCCTCTTGGGCGGATACTGATATTGCCGTTTGTACGATA GAGAAGGTGTGCACGATTAAGATTCAGTGTTGTTTGCAGAGCTCTGATATTTATTTCCTTAGGCCAATTCGTTGA TAAACAACACCATCGAAGAGTGTAGCGTTGGAGACCTGGGAGTCGTGGTTCTTGACGAGTTACACATGCTCGATG ACGAACACCGGGGCTATCTCTTGGAATTGATGGTCACGAAGCTGCTGTTATTACAGCAGGACACCCAGATTGTTG GGATGAGTGCTACACTCTCTGTAAGTCTATGGTTCAAGCCCTCGGTGGGCTGCTCTAACAGGTGTACAGAACACC GAAGTGCTGGCACAATGGATGAACGCCAAGTTCTACATCTCCACATACAAACCAATTCCTATTGAGGAATACTTG GTATACGAGAATGGAATCTACCCAGCTGCAACCTCGCGGCAATTGTTCCATACGGCATCTAAGCTGACTGCAGCT GCGTCCCTACACGATACCATTCCTCCACACCGAATAATTGAACCTTCTACCTCTAAGCAGCTCAGCAACCCTGCC ACTAATGCCATGGTAGCGCTAGCTGTCGAAACTGCAGCAGCTGGGTTTGGGTCATTGGTCTTTTGTGGCAGCCGT AACGCATGCCAAATTCACGCTGCGACTATCGGTGAAGCGATGCCGCCGGCGGAGCCGGAAGAGCTGAATAAACGA CTCGACCTTCTTGCAGAATTGCGGAGCCTCGCTTGTGGACTGGACCCGGCTTTGGAGACAACAATAATCAGAGGG ACAGGGTTTCACAGTTAGTACATATCCATCCATGGGGCCAGTTTCCACGCTTACTAATAACCACTTAGATGCTGG GATGACCACCGAAGAGCGGGAGCTAATTGCACAGGCCTATGACCAGGGTGTGCTCAAAGTCCTCGTGGCCACGTG CAGTCTTGCCGCTGGTGTAAACCTCCCGGCGAGACGAGTTATCATCAATGGTGCGCGCATGGGGCGTCAATTAGT AGGTCCGGCTATGTTGTAGGTACCTTCTTCTTGGAGTAAGGAGTATAAGCTGACAAAATTAGTCGTCAAATGTGC GGTCGTGCTGGCCGCAAAGGCAAGGATAACGCTGGCGAGACCTATCTCATCTGCGTGAAAGCCGATATGCAGGCT GTCTGCGATCTGTTGGACGCTGATATGCCAGCTATTGAGAGCTGCCTGGCACCTGAGAAAAGAGGCCTCAAGCGG TATGTATCTTGTTCTACTCTATTTATTGCTCCTGAATCATTCGCTCACAACCAAAAGGGCCTTACTCGAAGCCGT GGCAACGGGGTTGGTGTCCGGCTGCGAGGCGATCAAGGAATATGTTCGGTGCACGCTTCTCTACCAAACGTTGGA CAAGAAGATCGCATACAGCATCATGAAATCCGCTCTTCAGGAACTAGTCGACGAAGACCTTCTTATTTTGCGAAA CGACGAATCCTACGAAGCCACACCATTAGGACAAGCAATCGTGGCTTCGGCATTTTCACCCGAAGACGGCCTGTT CGTTCACGAAGAGCTGAAACGAGCATTACAGGCCTTTGTCATGGACGGTGACATGCACATCTTCTACATGTTCAC TCCGCTCCAAGCAGCCGTGAACACCCCCATTGATTGGCAAATCTTCCGCGATCAGCTAGACAGGCTAGATGAGAG CGGTCTCCGGGCTCTACAATTAGTCGGAGTCCAACCAGGTTTCGTCAACACAATGTACGCCTCCCCTTCCCTCTG CTACTCCATTGCTCCTACACATATCGCACACAATTCTACACCCACCCTCAAAACAAACCAGACCAGACCAACCCC AAACTAACATTCTTATCCCAGGGCCCAATCAGGCGCCTCCCTGAAAGAAAACACCGCAGTCCAGATAAAACAAGC CCGCATCTACTGCCGCGCCTACACAGCCCTTCAACTCCGCGATCTCAGCAACGAAGTCCCCATATCAACGATAGC CCAACGCTACAACACCCCCCGCGGTGCAGTTCAAACCTTGGCACAGCAGTGCCACGGCTTCGCCGCCGGCATGGT CAAATTCTGTCAGCGCATGAACTGGGGCATGATGGCAGCCGTCTTGGATCATATGCGCGATAGGCTTGAGGCTGG CGCGCGCGCGGATCTGCTTGAGATGGCCCAGGTTACTTTTGTGAAGAGTTGGACGGCGCGTTTGCTCAGGGATAA TGGATTTAAGAATTTGAGAGCTTTGGCGGAGGCTGAGCCGAAGGATTTGGTTCCTGTTCTTATGATGGTGGGTTT TTGGTCTTTTTTGGGATACCTTGAAGAGGATTGCTGGGCTATACATATGTGTGATCATCTACTGACGTGTCCTTG ATGTGTTTAGGCCAATCCTCGCAAAGCGCAGAAAAGTCAACTCTACCCGACAGAGACGGAGAGGTATGCTGCGAA ATTGCTGGTCAAGGCTGAGACGATCATTGCACATGCGACCAAGATCTGGGGTATGTTGTTATTTGTAGAGAATTT GTTCTAGGTGTATACTGACGGATCTATATTATAGAGCGAGAGATGCAGTTCGAGGTGGAAGAATGA |