© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g7961.t1 |
| Gene name | |
| Location | scaffold_27:266292..268035 |
| Strand | - |
| Gene length (bp) | 1743 |
| Transcript length (bp) | 1575 |
| Coding sequence length (bp) | 1575 |
| Protein length (aa) | 525 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 3.3E-53 | 10 | 387 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| GO:0009987 | cellular process | No |
| GO:0006811 | ion transport | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 9 | 31 | 22 |
| 2 | 77 | 99 | 22 |
| 3 | 111 | 133 | 22 |
| 4 | 328 | 350 | 22 |
| 5 | 357 | 379 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g7961.t1 MGLSKTNRILILLVIDTAFFLLELITGYAVHSLALVADSFHMLNDVLSLCVGLWAVKVANRETSSNTYTYGWQRA ETLGALVNGVFLVALCMSIFLEATQRLFEPQEVQNPRFVCIVGCFGLASNIVGLALFHDHSHGPGGHDHGNGGEH DEHDHDHDIEAGDHDHDHTPIAEHSESLAAPKVLDRAASLPQNALTQSPTDPSRKRRDLQTRGPRSYSTSTGRGF VSADDIPVLPERLRQGIIAASQYRNEQSSDSDNGNDEDEQPSERSGLLSHRDRTTNYTDEEGAPTKIHHHPDEDV HKSHNHAQPKPKGQKKGHNHDLNMRGVFLHVMGDALGNIGVIVSALIIWLTDYKWRFYADPVISLIITVIILASA IPLCKAASRILLQAVPPGMSIDHIKEDIERLPGVIGSHHLHVWQLSDTKVVASIHLQVDTEIKGEGSERYMRLAR QVRRCLHAYGIHSSTIQPEFAPESDVEDNGQGSSSHTEDHIPSRAASVREGDPQACLLECDNNCAEGGQCCPKK* |
| Coding | >Pro_DTO377G3_2|g7961.t1 ATGGGCCTGTCCAAAACGAACAGGATCTTGATCCTGCTGGTCATTGATACGGCATTTTTCTTGCTTGAATTGATC ACTGGTTATGCCGTGCACTCTCTTGCCCTTGTCGCCGACTCCTTCCACATGTTGAATGATGTCTTATCCCTATGT GTCGGATTATGGGCCGTGAAGGTTGCGAACCGGGAGACGAGCTCCAACACCTACACCTATGGCTGGCAACGAGCG GAGACACTTGGTGCCTTGGTCAATGGCGTGTTCCTAGTCGCCCTGTGCATGTCGATTTTCTTAGAGGCGACCCAG CGATTGTTCGAGCCCCAGGAAGTGCAAAACCCGCGCTTTGTTTGCATTGTTGGCTGCTTCGGTCTAGCCTCCAAT ATTGTTGGATTGGCACTGTTCCACGACCACTCCCACGGACCTGGCGGCCACGATCACGGCAACGGTGGCGAGCAC GATGAGCACGACCATGACCATGACATCGAGGCTGGTGATCATGATCACGATCACACACCCATCGCCGAACACAGT GAGAGCTTGGCGGCGCCTAAGGTTTTGGACAGAGCCGCAAGCTTGCCTCAAAATGCCCTTACCCAATCTCCCACT GACCCATCCCGAAAACGGCGCGACCTCCAGACCCGCGGGCCAAGGAGCTACAGCACTTCGACAGGACGTGGATTC GTGAGCGCCGATGATATTCCCGTGCTCCCCGAGAGACTGAGACAAGGGATTATCGCGGCTAGTCAATACCGGAAT GAACAATCGTCGGATTCGGACAATGGAAATGACGAGGATGAGCAGCCATCTGAGCGTTCAGGTCTTTTGAGTCAC CGCGATCGCACAACCAACTACACCGACGAGGAAGGAGCTCCTACCAAGATCCACCATCACCCCGATGAAGATGTC CACAAATCCCACAACCATGCCCAGCCTAAGCCAAAGGGCCAAAAGAAGGGTCACAACCACGACCTCAACATGCGT GGTGTCTTCCTCCATGTTATGGGAGACGCCCTCGGAAACATCGGTGTGATCGTTTCCGCGCTTATCATCTGGTTG ACGGACTACAAGTGGCGCTTTTACGCCGACCCGGTCATTTCTCTCATTATCACAGTGATCATTCTTGCATCTGCC ATTCCGTTGTGTAAGGCCGCCTCGCGTATCCTTCTTCAAGCCGTGCCCCCCGGCATGAGCATTGATCACATCAAA GAAGACATTGAGCGCCTTCCTGGTGTCATTGGATCACACCACCTGCACGTTTGGCAACTCAGCGACACCAAGGTC GTGGCTTCGATTCATCTCCAAGTGGACACCGAGATCAAGGGTGAAGGCTCGGAGAGGTACATGCGTCTGGCGAGA CAGGTCAGACGCTGTCTCCATGCTTACGGTATTCACTCTTCGACTATCCAACCTGAGTTCGCGCCGGAAAGTGAT GTCGAAGACAATGGACAAGGATCATCCTCTCACACCGAGGACCACATTCCCAGTCGTGCTGCTAGTGTTCGGGAG GGCGACCCTCAAGCATGCCTTCTGGAGTGTGACAACAACTGTGCCGAAGGAGGCCAGTGTTGCCCTAAAAAGTGA |
| Transcript | >Pro_DTO377G3_2|g7961.t1 ATGGGCCTGTCCAAAACGAACAGGATCTTGATCCTGCTGGTCATTGATACGGCATTTTTCTTGCTTGAATTGATC ACTGGTTATGCCGTGCACTCTCTTGCCCTTGTCGCCGACTCCTTCCACATGTTGAATGATGTCTTATCCCTATGT GTCGGATTATGGGCCGTGAAGGTTGCGAACCGGGAGACGAGCTCCAACACCTACACCTATGGCTGGCAACGAGCG GAGACACTTGGTGCCTTGGTCAATGGCGTGTTCCTAGTCGCCCTGTGCATGTCGATTTTCTTAGAGGCGACCCAG CGATTGTTCGAGCCCCAGGAAGTGCAAAACCCGCGCTTTGTTTGCATTGTTGGCTGCTTCGGTCTAGCCTCCAAT ATTGTTGGATTGGCACTGTTCCACGACCACTCCCACGGACCTGGCGGCCACGATCACGGCAACGGTGGCGAGCAC GATGAGCACGACCATGACCATGACATCGAGGCTGGTGATCATGATCACGATCACACACCCATCGCCGAACACAGT GAGAGCTTGGCGGCGCCTAAGGTTTTGGACAGAGCCGCAAGCTTGCCTCAAAATGCCCTTACCCAATCTCCCACT GACCCATCCCGAAAACGGCGCGACCTCCAGACCCGCGGGCCAAGGAGCTACAGCACTTCGACAGGACGTGGATTC GTGAGCGCCGATGATATTCCCGTGCTCCCCGAGAGACTGAGACAAGGGATTATCGCGGCTAGTCAATACCGGAAT GAACAATCGTCGGATTCGGACAATGGAAATGACGAGGATGAGCAGCCATCTGAGCGTTCAGGTCTTTTGAGTCAC CGCGATCGCACAACCAACTACACCGACGAGGAAGGAGCTCCTACCAAGATCCACCATCACCCCGATGAAGATGTC CACAAATCCCACAACCATGCCCAGCCTAAGCCAAAGGGCCAAAAGAAGGGTCACAACCACGACCTCAACATGCGT GGTGTCTTCCTCCATGTTATGGGAGACGCCCTCGGAAACATCGGTGTGATCGTTTCCGCGCTTATCATCTGGTTG ACGGACTACAAGTGGCGCTTTTACGCCGACCCGGTCATTTCTCTCATTATCACAGTGATCATTCTTGCATCTGCC ATTCCGTTGTGTAAGGCCGCCTCGCGTATCCTTCTTCAAGCCGTGCCCCCCGGCATGAGCATTGATCACATCAAA GAAGACATTGAGCGCCTTCCTGGTGTCATTGGATCACACCACCTGCACGTTTGGCAACTCAGCGACACCAAGGTC GTGGCTTCGATTCATCTCCAAGTGGACACCGAGATCAAGGGTGAAGGCTCGGAGAGGTACATGCGTCTGGCGAGA CAGGTCAGACGCTGTCTCCATGCTTACGGTATTCACTCTTCGACTATCCAACCTGAGTTCGCGCCGGAAAGTGAT GTCGAAGACAATGGACAAGGATCATCCTCTCACACCGAGGACCACATTCCCAGTCGTGCTGCTAGTGTTCGGGAG GGCGACCCTCAAGCATGCCTTCTGGAGTGTGACAACAACTGTGCCGAAGGAGGCCAGTGTTGCCCTAAAAAGTGA |
| Gene | >Pro_DTO377G3_2|g7961.t1 ATGGGCCTGTCCAAAACGAACAGGATCTTGATCCTGCTGGTCATTGATACGGCATTTTTCTTGCTTGAATTGATC ACTGGTTAGTTTTTGGCAATTTGACCGTATGCGACCGGCTTCTGACTGTGTTTTCCTAGGTTATGCCGTGCACTC TCTTGCCCTTGTCGCCGACTCCTTCCACATGGTACGCCACCATCTACAATCTTGCTCTTTGGCTGAATCTAACCC GAATAGTTGAATGATGTCTTATCCCTATGTGTCGGATTATGGGCCGTGAAGGTTGCGAACCGGGAGACGAGCTCC AACACCTACACCTATGGCGTAAGTTGATGTCAATACTAGCCCGAAGACGATGACGATCTGACAATTGGTTTCTCT ATACAGTGGCAACGAGCGGAGACACTTGGTGCCTTGGTCAATGGCGTGTTCCTAGTCGCCCTGTGCATGTCGATT TTCTTAGAGGCGACCCAGCGATTGTTCGAGCCCCAGGAAGTGCAAAACCCGCGCTTTGTTTGCATTGTTGGCTGC TTCGGTCTAGCCTCCAATATTGTTGGATTGGCACTGTTCCACGACCACTCCCACGGACCTGGCGGCCACGATCAC GGCAACGGTGGCGAGCACGATGAGCACGACCATGACCATGACATCGAGGCTGGTGATCATGATCACGATCACACA CCCATCGCCGAACACAGTGAGAGCTTGGCGGCGCCTAAGGTTTTGGACAGAGCCGCAAGCTTGCCTCAAAATGCC CTTACCCAATCTCCCACTGACCCATCCCGAAAACGGCGCGACCTCCAGACCCGCGGGCCAAGGAGCTACAGCACT TCGACAGGACGTGGATTCGTGAGCGCCGATGATATTCCCGTGCTCCCCGAGAGACTGAGACAAGGGATTATCGCG GCTAGTCAATACCGGAATGAACAATCGTCGGATTCGGACAATGGAAATGACGAGGATGAGCAGCCATCTGAGCGT TCAGGTCTTTTGAGTCACCGCGATCGCACAACCAACTACACCGACGAGGAAGGAGCTCCTACCAAGATCCACCAT CACCCCGATGAAGATGTCCACAAATCCCACAACCATGCCCAGCCTAAGCCAAAGGGCCAAAAGAAGGGTCACAAC CACGACCTCAACATGCGTGGTGTCTTCCTCCATGTTATGGGAGACGCCCTCGGAAACATCGGTGTGATCGTTTCC GCGCTTATCATCTGGTTGACGGACTACAAGTGGCGCTTTTACGCCGACCCGGTCATTTCTCTCATTATCACAGTG ATCATTCTTGCATCTGCCATTCCGTTGTGTAAGGCCGCCTCGCGTATCCTTCTTCAAGCCGTGCCCCCCGGCATG AGCATTGATCACATCAAAGAAGACATTGAGCGCCTTCCTGGTGTCATTGGATCACACCACCTGCACGTTTGGCAA CTCAGCGACACCAAGGTCGTGGCTTCGATTCATCTCCAAGTGGACACCGAGATCAAGGGTGAAGGCTCGGAGAGG TACATGCGTCTGGCGAGACAGGTCAGACGCTGTCTCCATGCTTACGGTATTCACTCTTCGACTATCCAACCTGAG TTCGCGCCGGAAAGTGATGTCGAAGACAATGGACAAGGATCATCCTCTCACACCGAGGACCACATTCCCAGTCGT GCTGCTAGTGTTCGGGAGGGCGACCCTCAAGCATGCCTTCTGGAGTGTGACAACAACTGTGCCGAAGGAGGCCAG TGTTGCCCTAAAAAGTGA |