© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g7948.t1 |
| Gene name | |
| Location | scaffold_27:240449..242325 |
| Strand | + |
| Gene length (bp) | 1876 |
| Transcript length (bp) | 1686 |
| Coding sequence length (bp) | 1686 |
| Protein length (aa) | 562 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.2E-117 | 53 | 524 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.3E-24 | 84 | 443 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 48 | 70 | 22 |
| 2 | 98 | 119 | 21 |
| 3 | 126 | 148 | 22 |
| 4 | 152 | 174 | 22 |
| 5 | 181 | 203 | 22 |
| 6 | 218 | 240 | 22 |
| 7 | 324 | 343 | 19 |
| 8 | 358 | 380 | 22 |
| 9 | 389 | 408 | 19 |
| 10 | 423 | 445 | 22 |
| 11 | 466 | 483 | 17 |
| 12 | 488 | 510 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g7948.t1 MADKKDSPESEHFESEIKSDPTTLISPLGSERKPYGETGLKGILTNKYVAACAAFATLGGAMFGYDQGVISITLT MDQFLERFPEVGPDAPGAGFQKGILTAMIELGAFIGAMNQGWIADKISRKWSIMVAVIIFLFGSALQTGAMSFSM LVGARFVGGIGVGMLAMVAPLYISEIAPPEIRGTLLVLQELSIVTAIVVAFYITYGTRYIPSEWSWRLPFLIQMI PAVFLAVGIPFLPYSPRWLAGRGRDEEALESLCKLRGVDPTDERVIREWVEIRAEVAYCKELSVVRHPKCQDGSY SSRAMLHVWSYLDCFRKGCWKRTHVGIGLMFFQQFGGVNALIYYSPSLFAGMGLDYEMQLHMSGVINICQMLACF WSLWGMDRFGRRPLLFGGAACMVLAHFIIAVLMSQFQSDWPDHSAEGWVCVAFLCFFMLTYGATWGPIPWAMPAE IFPSSLRAKGMAYSTMSNWLNNFIIGLITPPLVQNTGYGTYAFFCVFCTLSFVWTWFFVPETNGKTLEEMDSVFG DNTSTEEIAQRARIEATIWAHAAARSDGLEGTQQIT* |
| Coding | >Pro_DTO377G3_2|g7948.t1 ATGGCGGACAAGAAAGACTCCCCAGAGAGCGAACATTTTGAATCCGAAATAAAATCGGACCCTACTACTCTCATA TCACCCCTTGGATCAGAAAGAAAACCATATGGCGAAACTGGCCTGAAGGGCATCCTCACAAACAAGTATGTGGCA GCATGCGCCGCCTTCGCAACCCTGGGCGGAGCCATGTTCGGCTACGACCAAGGTGTCATCTCAATCACTCTTACA ATGGACCAATTTCTCGAAAGATTCCCCGAAGTTGGTCCCGATGCACCCGGCGCTGGATTCCAGAAAGGAATCCTC ACTGCCATGATCGAGCTCGGAGCCTTTATCGGAGCAATGAATCAGGGATGGATTGCCGACAAGATCTCTCGCAAG TGGTCTATCATGGTTGCAGTGATAATCTTCCTCTTTGGATCCGCCCTGCAGACAGGAGCTATGAGTTTCTCAATG CTTGTAGGTGCCCGGTTTGTTGGAGGTATCGGTGTCGGCATGCTGGCCATGGTGGCACCACTTTACATTTCTGAG ATCGCGCCCCCGGAGATTCGTGGTACTTTGCTTGTTCTACAGGAGCTTTCTATTGTTACTGCTATTGTGGTTGCT TTCTACATCACCTATGGTACACGATATATTCCGAGTGAATGGTCGTGGCGCCTTCCTTTCCTCATTCAGATGATT CCTGCCGTATTCCTCGCCGTCGGTATTCCATTCCTACCATATTCACCTCGTTGGCTCGCTGGCCGAGGCCGAGAT GAAGAAGCACTCGAGTCTCTCTGCAAGTTGCGCGGTGTCGACCCTACTGACGAGCGCGTCATCCGAGAGTGGGTT GAGATTCGCGCCGAAGTTGCTTACTGCAAAGAATTGAGCGTTGTGAGACACCCAAAGTGCCAGGATGGAAGTTAC AGCAGCCGTGCTATGCTTCATGTCTGGAGCTATCTGGACTGTTTCCGCAAAGGGTGTTGGAAGCGTACCCATGTT GGTATTGGACTGATGTTTTTCCAACAATTCGGTGGTGTCAACGCTCTCATCTACTACTCGCCTAGTCTATTCGCC GGAATGGGTCTAGACTACGAAATGCAACTCCACATGTCCGGCGTCATCAACATCTGCCAAATGCTAGCCTGTTTC TGGTCACTATGGGGAATGGACAGATTTGGCCGGAGGCCTTTGCTCTTTGGCGGTGCTGCCTGCATGGTTCTTGCG CATTTCATAATCGCTGTCTTGATGAGCCAATTCCAATCGGACTGGCCTGATCATTCCGCAGAGGGCTGGGTTTGC GTCGCTTTCTTGTGCTTCTTCATGCTTACCTATGGCGCTACCTGGGGTCCTATCCCTTGGGCTATGCCGGCTGAG ATCTTCCCCTCTTCGCTACGTGCTAAGGGTATGGCATACTCCACAATGTCGAACTGGCTTAACAACTTCATCATT GGGCTTATCACTCCGCCGCTTGTGCAAAACACTGGGTATGGAACTTATGCGTTCTTCTGTGTGTTTTGCACCCTG TCGTTTGTTTGGACGTGGTTCTTCGTTCCGGAGACCAACGGGAAAACTTTGGAGGAAATGGACTCAGTCTTTGGG GATAACACTTCGACTGAGGAGATAGCACAGCGTGCGAGGATTGAGGCTACAATCTGGGCCCATGCTGCCGCACGG TCTGATGGGCTCGAAGGTACCCAGCAAATTACTTAG |
| Transcript | >Pro_DTO377G3_2|g7948.t1 ATGGCGGACAAGAAAGACTCCCCAGAGAGCGAACATTTTGAATCCGAAATAAAATCGGACCCTACTACTCTCATA TCACCCCTTGGATCAGAAAGAAAACCATATGGCGAAACTGGCCTGAAGGGCATCCTCACAAACAAGTATGTGGCA GCATGCGCCGCCTTCGCAACCCTGGGCGGAGCCATGTTCGGCTACGACCAAGGTGTCATCTCAATCACTCTTACA ATGGACCAATTTCTCGAAAGATTCCCCGAAGTTGGTCCCGATGCACCCGGCGCTGGATTCCAGAAAGGAATCCTC ACTGCCATGATCGAGCTCGGAGCCTTTATCGGAGCAATGAATCAGGGATGGATTGCCGACAAGATCTCTCGCAAG TGGTCTATCATGGTTGCAGTGATAATCTTCCTCTTTGGATCCGCCCTGCAGACAGGAGCTATGAGTTTCTCAATG CTTGTAGGTGCCCGGTTTGTTGGAGGTATCGGTGTCGGCATGCTGGCCATGGTGGCACCACTTTACATTTCTGAG ATCGCGCCCCCGGAGATTCGTGGTACTTTGCTTGTTCTACAGGAGCTTTCTATTGTTACTGCTATTGTGGTTGCT TTCTACATCACCTATGGTACACGATATATTCCGAGTGAATGGTCGTGGCGCCTTCCTTTCCTCATTCAGATGATT CCTGCCGTATTCCTCGCCGTCGGTATTCCATTCCTACCATATTCACCTCGTTGGCTCGCTGGCCGAGGCCGAGAT GAAGAAGCACTCGAGTCTCTCTGCAAGTTGCGCGGTGTCGACCCTACTGACGAGCGCGTCATCCGAGAGTGGGTT GAGATTCGCGCCGAAGTTGCTTACTGCAAAGAATTGAGCGTTGTGAGACACCCAAAGTGCCAGGATGGAAGTTAC AGCAGCCGTGCTATGCTTCATGTCTGGAGCTATCTGGACTGTTTCCGCAAAGGGTGTTGGAAGCGTACCCATGTT GGTATTGGACTGATGTTTTTCCAACAATTCGGTGGTGTCAACGCTCTCATCTACTACTCGCCTAGTCTATTCGCC GGAATGGGTCTAGACTACGAAATGCAACTCCACATGTCCGGCGTCATCAACATCTGCCAAATGCTAGCCTGTTTC TGGTCACTATGGGGAATGGACAGATTTGGCCGGAGGCCTTTGCTCTTTGGCGGTGCTGCCTGCATGGTTCTTGCG CATTTCATAATCGCTGTCTTGATGAGCCAATTCCAATCGGACTGGCCTGATCATTCCGCAGAGGGCTGGGTTTGC GTCGCTTTCTTGTGCTTCTTCATGCTTACCTATGGCGCTACCTGGGGTCCTATCCCTTGGGCTATGCCGGCTGAG ATCTTCCCCTCTTCGCTACGTGCTAAGGGTATGGCATACTCCACAATGTCGAACTGGCTTAACAACTTCATCATT GGGCTTATCACTCCGCCGCTTGTGCAAAACACTGGGTATGGAACTTATGCGTTCTTCTGTGTGTTTTGCACCCTG TCGTTTGTTTGGACGTGGTTCTTCGTTCCGGAGACCAACGGGAAAACTTTGGAGGAAATGGACTCAGTCTTTGGG GATAACACTTCGACTGAGGAGATAGCACAGCGTGCGAGGATTGAGGCTACAATCTGGGCCCATGCTGCCGCACGG TCTGATGGGCTCGAAGGTACCCAGCAAATTACTTAG |
| Gene | >Pro_DTO377G3_2|g7948.t1 ATGGCGGACAAGAAAGACTCCCCAGAGAGCGAACATTTTGAATCCGAAATAAAATCGGACCCTACTACTCTCATA TCACCCCTTGGATCAGAAAGAAAACCATATGGCGAAACTGGTATTGCTTCCCCTACTGTCTCTATACTCATCACA TACTAATCTACCGTCGCAAAACAGGCCTGAAGGGCATCCTCACAAACAAGTATGTGGCAGCATGCGCCGCCTTCG CAACCCTGGGCGGAGCCATGTTCGGCTACGACCAAGGTGTCATCTCAATCACTCTTACAATGGACCAATTTCTCG AAAGATTCCCCGAAGTTGGTCCCGATGCACCCGGCGCTGGATTCCAGAAAGGAATCCTCACTGCCATGATCGAGC TCGGAGCCTTTATCGGAGCAATGAATCAGGGATGGATTGCCGACAAGATCTCTCGCAAGTGGTCTATCATGGTTG CAGTGATAATCTTCCTCTTTGGATCCGCCCTGCAGACAGGAGCTATGAGTTTCTCAATGCTTGTAGGTGCCCGGT TTGTTGGAGGTATCGGTGTCGGCATGCTGGCCATGGTGGCACCACTTTACATTTCTGAGATCGCGCCCCCGGAGA TTCGTGGTACTTTGCTTGTTCTACAGGAGCTTTCTATTGTTACTGCTATTGTGGTTGCTTTCTACATCACCTATG GTACACGATATATTCCGAGTGAATGGTCGTGGCGCCTTCCTTTCCTCATTCAGGTATGTCTTCTTTGTTAACCAT GATTTTCCCTACCCTAACCACCGATAGATGATTCCTGCCGTATTCCTCGCCGTCGGTATTCCATTCCTACCATAT TCACCTCGTTGGCTCGCTGGCCGAGGCCGAGATGAAGAAGCACTCGAGTCTCTCTGCAAGTTGCGCGGTGTCGAC CCTACTGACGAGCGCGTCATCCGAGAGTGGGTTGAGATTCGCGCCGAAGTTGCTTACTGCAAAGAATTGAGCGTT GTGAGACACCCAAAGTGCCAGGATGGAAGTTACAGCAGCCGTGCTATGCTTCATGTCTGGAGCTATCTGGACTGT TTCCGCAAAGGGTGTTGGAAGCGTACCCATGTTGGTATTGGACTGATGTTTTTCCAACGTGCGTATCTGTCTGTC GTGGTCTAACCACCACTTTCTCTCCTTTTCCTCCTCACAGAGGCTAACCCATATCCTTCTCGCAGAATTCGGTGG TGTCAACGCTCTCATCTACTACTCGCCTAGTCTATTCGCCGGAATGGGTCTAGACTACGAAATGCAACTCCACAT GTCCGGCGTCATCAACATCTGCCAAATGCTAGCCTGTTTCTGGTCACTATGGGGAATGGACAGATTTGGCCGGAG GCCTTTGCTCTTTGGCGGTGCTGCCTGCATGGTTCTTGCGCATTTCATAATCGCTGTCTTGATGAGCCAATTCCA ATCGGACTGGCCTGATCATTCCGCAGAGGGCTGGGTTTGCGTCGCTTTCTTGTGCTTCTTCATGCTTACCTATGG CGCTACCTGGGGTCCTATCCCTTGGGCTATGCCGGCTGAGATCTTCCCCTCTTCGCTACGTGCTAAGGGTATGGC ATACTCCACAATGTCGAACTGGCTTAACAACTTCATCATTGGGCTTATCACTCCGCCGCTTGTGCAAAACACTGG GTATGGAACTTATGCGTTCTTCTGTGTGTTTTGCACCCTGTCGTTTGTTTGGACGTGGTTCTTCGTTCCGGAGAC CAACGGGAAAACTTTGGAGGAAATGGACTCAGTCTTTGGGGATAACACTTCGACTGAGGAGATAGCACAGCGTGC GAGGATTGAGGCTACAATCTGGGCCCATGCTGCCGCACGGTCTGATGGGCTCGAAGGTACCCAGCAAATTACTTA G |