Protein ID | Pro_DTO377G3_2|g7890.t1 |
Gene name | |
Location | scaffold_27:72329..75753 |
Strand | + |
Gene length (bp) | 3424 |
Transcript length (bp) | 3180 |
Coding sequence length (bp) | 3180 |
Protein length (aa) | 1060 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12460 | MMS19_C | RNAPII transcription regulator C-terminal | 2.5E-121 | 525 | 969 |
PF14500 | MMS19_N | Dos2-interacting transcription regulator of RNA-Pol-II | 5.4E-91 | 40 | 297 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g7890.t1 MSALQTFMLVVDHDKEEAKRIAEGSAHDIEIKKVTLLDTVQSLGEYINDEDPILRGKAISFLTAIIQALSPKYLS RQQIQVLTTFFCDRIEDGGAVDGLQALQGLDRFNKFLATQVAQALFSNFQDLQSRSQTQRFHVYELLNDLMSNHR GAMCDMGDISLLGVVDIMTGEKDPRNLMIVFSILKVVMVEWDISNHVETLFDSVYNYFPITFRPPPNDPYGITAQ DLKGRLQECISSTRHFAPHSIPALLDKLDSTSPNVKKDALNALIACIHSYDPDTVSRYSITIWGVLKFEILNAQE EFLSEASLEALQAIAQRLSEGVTEVSQELPLAKYLQPITKECNEQLREPQNKKANPAQSILSCVSAASPVSFVLV VQTVVPPIFTLYQEADGIVKQRALLETLNVLFDSATTVFGQWTTRGGEAAIENPLLEFKDQFSDLFGQVLMGAAK EEVSFRVTALKGFLRLSTLRDYFQENEIGLFVQYLDEILLKEESVGRDDLKKEAIAALAEISKHKPRLIVDITFP AFVATLPEEDEGSDARYLPTLETLAQISVERDIFETLFRRLFSKLSVLLQKEEPGSVAYPRAILATLLYVMQQRN MEQDQSVDLYFDKVVVGLCRDVAASASGKAKNRIFNDPTVLDTLGRLCNLLVRSVSIQKQEQVAENVYSLFSAAG DFVPLPFTQTREADRERTIIISTYLLAGLSKDCGNKIPHTDPDMAGLLLDLIYRCILSTEPATHQAYLRHLALLV NKFLSKQDVPIAERLIDSLLEGENTELQSLSPPIIRTIFWLSKALILRLAPATTHILTSLLALLSSPDQETSATA AQGFSIILGEDDIISATNGATIRLLCRQRLFTTVIPLISTRIREVNIAGTDGSHPTPKAPDHIKPAHLTALAGIL STIPTALVMPELPTLLPLLLQSLDLQTADSVAVRTATLDTLAVIIRDNGVTVIDRCGHVQSLVTRLLKTTSTNIG PGAVNSPRLRADALKCLNLLATHQVPGAAANAPPGISPLLPVKNQVLRSLRAVLDDPKRNVRKAAVDARAAWLRC VDDAPDEEE* |
Coding | >Pro_DTO377G3_2|g7890.t1 ATGTCGGCTTTGCAGACCTTTATGCTGGTCGTGGACCACGACAAAGAAGAAGCCAAGCGCATTGCCGAGGGAAGC GCGCATGATATTGAGATTAAAAAAGTGACTTTGCTTGATACTGTCCAATCTCTCGGCGAATATATTAACGACGAA GACCCGATCTTACGTGGAAAAGCGATTTCCTTCCTTACGGCCATTATCCAAGCCCTCTCGCCGAAATACCTCTCG AGACAACAGATTCAAGTCCTGACTACATTCTTCTGTGATAGAATTGAGGATGGAGGTGCTGTTGATGGGCTGCAG GCCCTGCAGGGCTTGGACCGTTTTAACAAGTTTTTGGCTACCCAAGTAGCGCAAGCACTTTTTTCCAACTTTCAA GATCTCCAGTCTCGGTCTCAAACACAACGATTCCATGTCTATGAATTGCTTAATGACTTGATGTCAAACCACCGC GGAGCTATGTGTGATATGGGAGATATCTCGCTTCTAGGTGTTGTTGATATTATGACGGGAGAGAAAGACCCGAGA AATTTGATGATTGTATTCTCGATCCTGAAAGTGGTCATGGTGGAATGGGACATTTCGAACCACGTTGAGACTCTC TTCGACTCGGTATATAACTACTTCCCAATCACATTCCGACCTCCGCCCAACGACCCTTATGGAATCACCGCACAG GATCTGAAGGGTCGTCTTCAAGAGTGTATCTCTTCGACAAGGCATTTTGCGCCCCACTCTATCCCCGCCTTATTG GACAAGCTTGATTCTACTTCTCCTAATGTAAAGAAAGATGCACTTAATGCATTGATCGCATGTATCCATTCATAC GACCCCGACACAGTGTCTAGGTATTCCATTACCATATGGGGAGTCCTCAAGTTTGAGATTCTCAATGCCCAAGAG GAGTTCTTATCCGAAGCCTCCCTCGAGGCTCTGCAAGCAATTGCCCAACGGCTATCCGAAGGAGTTACCGAAGTG TCGCAAGAATTGCCTCTTGCAAAGTACCTTCAGCCAATCACCAAGGAATGCAATGAGCAACTCCGGGAGCCCCAA AACAAGAAGGCCAATCCGGCCCAATCGATCCTCAGCTGTGTGTCTGCTGCTTCGCCCGTTTCCTTTGTCCTTGTT GTACAAACAGTCGTACCTCCGATTTTCACACTTTACCAAGAAGCAGACGGAATCGTCAAACAAAGAGCGCTTCTC GAAACTTTGAATGTCTTGTTCGATTCTGCTACAACCGTGTTTGGACAATGGACCACCCGAGGGGGTGAGGCGGCT ATCGAAAACCCGCTACTCGAATTTAAAGACCAATTCTCAGACCTTTTTGGTCAGGTATTGATGGGTGCAGCAAAG GAAGAGGTTTCCTTCCGGGTGACTGCCTTGAAAGGCTTCTTGCGTCTGTCGACTTTGCGTGATTACTTCCAGGAG AATGAGATTGGGCTTTTCGTACAATACCTTGACGAAATCCTTCTCAAGGAGGAGTCCGTGGGCCGGGATGATCTC AAGAAAGAGGCAATTGCTGCCCTTGCTGAGATTTCCAAGCACAAGCCCCGCCTGATTGTGGATATCACTTTCCCT GCATTTGTGGCAACTCTGCCAGAGGAAGATGAAGGGTCGGATGCCCGGTATCTGCCGACGCTCGAGACCCTTGCC CAGATCAGCGTCGAGAGGGACATCTTCGAGACACTTTTCCGTCGTCTTTTCAGCAAACTGTCCGTTCTGCTGCAA AAGGAGGAACCCGGGTCAGTTGCTTACCCACGTGCGATCCTCGCCACCTTGCTTTATGTTATGCAACAGAGAAAC ATGGAACAAGACCAGAGTGTGGATTTGTACTTCGACAAGGTTGTGGTTGGACTTTGCCGCGATGTCGCAGCATCG GCTTCTGGCAAGGCCAAGAATCGGATTTTCAATGATCCTACCGTGCTTGACACTTTGGGTCGACTCTGTAATCTC CTTGTGCGGTCTGTTTCCATTCAGAAACAGGAGCAAGTTGCCGAAAACGTCTACAGCCTCTTCTCTGCAGCTGGA GATTTCGTGCCTCTTCCGTTTACTCAGACTAGAGAAGCCGATCGAGAACGTACGATCATTATCTCGACATACCTG CTCGCGGGATTATCCAAGGACTGTGGTAACAAGATCCCGCACACCGACCCAGACATGGCGGGGTTGCTGTTGGAT CTGATCTATCGTTGTATCTTGAGCACCGAACCAGCAACACATCAAGCCTACCTGCGCCACCTGGCCTTGCTCGTC AACAAGTTCCTGTCGAAGCAGGATGTGCCAATCGCCGAGAGACTCATTGATTCTCTCCTCGAAGGCGAGAACACA GAATTACAGAGCCTCAGTCCTCCTATCATTCGCACCATCTTCTGGCTATCTAAAGCCTTGATCCTTCGCTTAGCC CCCGCAACAACTCACATCCTGACCTCCCTCCTCGCTCTCCTCTCCTCCCCAGACCAAGAAACCAGCGCGACGGCA GCACAAGGCTTCTCCATAATTCTAGGCGAAGACGATATCATCTCCGCAACCAATGGCGCTACAATCCGCCTCCTG TGCAGACAGCGCCTCTTCACAACAGTCATCCCTTTGATCTCCACTCGCATTCGCGAGGTGAACATCGCCGGCACA GATGGCTCCCACCCCACCCCAAAAGCGCCCGACCATATTAAACCAGCGCACCTAACCGCCCTCGCGGGTATCCTC TCCACCATCCCCACGGCCCTAGTCATGCCTGAACTCCCCACCCTTCTCCCCCTCCTCCTGCAATCCCTCGACCTC CAGACCGCCGACTCGGTCGCTGTCCGCACAGCAACGCTCGACACCCTCGCCGTCATCATCCGTGACAACGGCGTC ACCGTCATCGACCGGTGCGGCCACGTCCAGAGTCTTGTCACGAGACTCCTCAAAACAACATCTACAAATATCGGC CCTGGTGCGGTTAACAGCCCCCGTCTCCGCGCCGATGCTTTGAAATGTCTCAATCTCCTCGCTACGCACCAGGTG CCCGGCGCTGCAGCTAATGCTCCGCCGGGTATCTCGCCTCTATTACCTGTCAAGAATCAGGTTCTGAGGTCCTTG CGAGCCGTTCTTGACGACCCTAAGCGTAATGTACGGAAGGCGGCGGTTGATGCCCGAGCCGCTTGGCTGCGTTGT GTGGATGATGCACCGGACGAGGAAGAATGA |
Transcript | >Pro_DTO377G3_2|g7890.t1 ATGTCGGCTTTGCAGACCTTTATGCTGGTCGTGGACCACGACAAAGAAGAAGCCAAGCGCATTGCCGAGGGAAGC GCGCATGATATTGAGATTAAAAAAGTGACTTTGCTTGATACTGTCCAATCTCTCGGCGAATATATTAACGACGAA GACCCGATCTTACGTGGAAAAGCGATTTCCTTCCTTACGGCCATTATCCAAGCCCTCTCGCCGAAATACCTCTCG AGACAACAGATTCAAGTCCTGACTACATTCTTCTGTGATAGAATTGAGGATGGAGGTGCTGTTGATGGGCTGCAG GCCCTGCAGGGCTTGGACCGTTTTAACAAGTTTTTGGCTACCCAAGTAGCGCAAGCACTTTTTTCCAACTTTCAA GATCTCCAGTCTCGGTCTCAAACACAACGATTCCATGTCTATGAATTGCTTAATGACTTGATGTCAAACCACCGC GGAGCTATGTGTGATATGGGAGATATCTCGCTTCTAGGTGTTGTTGATATTATGACGGGAGAGAAAGACCCGAGA AATTTGATGATTGTATTCTCGATCCTGAAAGTGGTCATGGTGGAATGGGACATTTCGAACCACGTTGAGACTCTC TTCGACTCGGTATATAACTACTTCCCAATCACATTCCGACCTCCGCCCAACGACCCTTATGGAATCACCGCACAG GATCTGAAGGGTCGTCTTCAAGAGTGTATCTCTTCGACAAGGCATTTTGCGCCCCACTCTATCCCCGCCTTATTG GACAAGCTTGATTCTACTTCTCCTAATGTAAAGAAAGATGCACTTAATGCATTGATCGCATGTATCCATTCATAC GACCCCGACACAGTGTCTAGGTATTCCATTACCATATGGGGAGTCCTCAAGTTTGAGATTCTCAATGCCCAAGAG GAGTTCTTATCCGAAGCCTCCCTCGAGGCTCTGCAAGCAATTGCCCAACGGCTATCCGAAGGAGTTACCGAAGTG TCGCAAGAATTGCCTCTTGCAAAGTACCTTCAGCCAATCACCAAGGAATGCAATGAGCAACTCCGGGAGCCCCAA AACAAGAAGGCCAATCCGGCCCAATCGATCCTCAGCTGTGTGTCTGCTGCTTCGCCCGTTTCCTTTGTCCTTGTT GTACAAACAGTCGTACCTCCGATTTTCACACTTTACCAAGAAGCAGACGGAATCGTCAAACAAAGAGCGCTTCTC GAAACTTTGAATGTCTTGTTCGATTCTGCTACAACCGTGTTTGGACAATGGACCACCCGAGGGGGTGAGGCGGCT ATCGAAAACCCGCTACTCGAATTTAAAGACCAATTCTCAGACCTTTTTGGTCAGGTATTGATGGGTGCAGCAAAG GAAGAGGTTTCCTTCCGGGTGACTGCCTTGAAAGGCTTCTTGCGTCTGTCGACTTTGCGTGATTACTTCCAGGAG AATGAGATTGGGCTTTTCGTACAATACCTTGACGAAATCCTTCTCAAGGAGGAGTCCGTGGGCCGGGATGATCTC AAGAAAGAGGCAATTGCTGCCCTTGCTGAGATTTCCAAGCACAAGCCCCGCCTGATTGTGGATATCACTTTCCCT GCATTTGTGGCAACTCTGCCAGAGGAAGATGAAGGGTCGGATGCCCGGTATCTGCCGACGCTCGAGACCCTTGCC CAGATCAGCGTCGAGAGGGACATCTTCGAGACACTTTTCCGTCGTCTTTTCAGCAAACTGTCCGTTCTGCTGCAA AAGGAGGAACCCGGGTCAGTTGCTTACCCACGTGCGATCCTCGCCACCTTGCTTTATGTTATGCAACAGAGAAAC ATGGAACAAGACCAGAGTGTGGATTTGTACTTCGACAAGGTTGTGGTTGGACTTTGCCGCGATGTCGCAGCATCG GCTTCTGGCAAGGCCAAGAATCGGATTTTCAATGATCCTACCGTGCTTGACACTTTGGGTCGACTCTGTAATCTC CTTGTGCGGTCTGTTTCCATTCAGAAACAGGAGCAAGTTGCCGAAAACGTCTACAGCCTCTTCTCTGCAGCTGGA GATTTCGTGCCTCTTCCGTTTACTCAGACTAGAGAAGCCGATCGAGAACGTACGATCATTATCTCGACATACCTG CTCGCGGGATTATCCAAGGACTGTGGTAACAAGATCCCGCACACCGACCCAGACATGGCGGGGTTGCTGTTGGAT CTGATCTATCGTTGTATCTTGAGCACCGAACCAGCAACACATCAAGCCTACCTGCGCCACCTGGCCTTGCTCGTC AACAAGTTCCTGTCGAAGCAGGATGTGCCAATCGCCGAGAGACTCATTGATTCTCTCCTCGAAGGCGAGAACACA GAATTACAGAGCCTCAGTCCTCCTATCATTCGCACCATCTTCTGGCTATCTAAAGCCTTGATCCTTCGCTTAGCC CCCGCAACAACTCACATCCTGACCTCCCTCCTCGCTCTCCTCTCCTCCCCAGACCAAGAAACCAGCGCGACGGCA GCACAAGGCTTCTCCATAATTCTAGGCGAAGACGATATCATCTCCGCAACCAATGGCGCTACAATCCGCCTCCTG TGCAGACAGCGCCTCTTCACAACAGTCATCCCTTTGATCTCCACTCGCATTCGCGAGGTGAACATCGCCGGCACA GATGGCTCCCACCCCACCCCAAAAGCGCCCGACCATATTAAACCAGCGCACCTAACCGCCCTCGCGGGTATCCTC TCCACCATCCCCACGGCCCTAGTCATGCCTGAACTCCCCACCCTTCTCCCCCTCCTCCTGCAATCCCTCGACCTC CAGACCGCCGACTCGGTCGCTGTCCGCACAGCAACGCTCGACACCCTCGCCGTCATCATCCGTGACAACGGCGTC ACCGTCATCGACCGGTGCGGCCACGTCCAGAGTCTTGTCACGAGACTCCTCAAAACAACATCTACAAATATCGGC CCTGGTGCGGTTAACAGCCCCCGTCTCCGCGCCGATGCTTTGAAATGTCTCAATCTCCTCGCTACGCACCAGGTG CCCGGCGCTGCAGCTAATGCTCCGCCGGGTATCTCGCCTCTATTACCTGTCAAGAATCAGGTTCTGAGGTCCTTG CGAGCCGTTCTTGACGACCCTAAGCGTAATGTACGGAAGGCGGCGGTTGATGCCCGAGCCGCTTGGCTGCGTTGT GTGGATGATGCACCGGACGAGGAAGAATGA |
Gene | >Pro_DTO377G3_2|g7890.t1 ATGTCGGCTTTGCAGACCTTTATGCTGGTCGTGGACCACGACAAAGAAGAAGCCAAGCGCATTGCCGAGGGAAGC GCGCATGGTATGCTAATTCGCCCCGCACTCGAGCCCACTTCAAATCGTTGCATTACTAACGGAAGCGATAGATAT TGAGATTAAAAAAGTGACTTTGCTTGATACTGTCCAATCTCTCGGCGAATATATTAACGACGAAGACCCGATCTT ACGTGGAAAAGCGATTTCCTTCCTTACGGCCATTATCCAAGCCCTCTCGCCGAAATACCTCTCGAGACAACAGAT TCAAGTCCTGACTACATTCTTCTGTGATAGAATTGAGGATGGAGGTGCTGTTGATGGGCTGCAGGCCCTGCAGGG CTTGGACCGTTTTAACAAGTTTTTGGCTACCCAAGTAGCGCAAGCGTAGGTGCTATACTTTTACATCCCTGTATT CGCCGGGGATAAAGCTTAACTCAAGATGACCCAGTGCTGATTTATTGATATAGACTTTTTTCCAACTTTCAAGAT CTCCAGTCTCGGTCTCAAACACAACGATTCCATGTCTATGAATTGCTTAATGACTTGATGTCAAACCACCGCGGA GCTATGTGTGATATGGGAGATATCTCGCTTCTAGGTGTTGTTGATATTATGACGGGAGAGAAAGACCCGAGAAAT TTGATGATTGTATTCTCGATCCTGAAAGTGGTCATGGTGGAATGGGACATTTCGAACCACGTTGAGGTATGTGTA ATTTCCCAAGCTCGGCGATCCCGCTAACACTAGACAGACTCTCTTCGACTCGGTATATAACTACTTCCCAATCAC ATTCCGACCTCCGCCCAACGACCCTTATGGAATCACCGCACAGGATCTGAAGGGTCGTCTTCAAGAGTGTATCTC TTCGACAAGGCATTTTGCGCCCCACTCTATCCCCGCCTTATTGGACAAGCTTGATTCTACTTCTCCTAATGTAAA GGTAAAATTGCTCAACACTCCGTGATTCGAAAGCCGTCTAATAAATCTATAGAAAGATGCACTTAATGCATTGAT CGCATGTATCCATTCATACGACCCCGACACAGTGTCTAGGTATTCCATTACCATATGGGGAGTCCTCAAGTTTGA GATTCTCAATGCCCAAGAGGAGTTCTTATCCGAAGCCTCCCTCGAGGCTCTGCAAGCAATTGCCCAACGGCTATC CGAAGGAGTTACCGAAGTGTCGCAAGAATTGCCTCTTGCAAAGTACCTTCAGCCAATCACCAAGGAATGCAATGA GCAACTCCGGGAGCCCCAAAACAAGAAGGCCAATCCGGCCCAATCGATCCTCAGCTGTGTGTCTGCTGCTTCGCC CGTTTCCTTTGTCCTTGTTGTACAAACAGTCGTACCTCCGATTTTCACACTTTACCAAGAAGCAGACGGAATCGT CAAACAAAGAGCGCTTCTCGAAACTTTGAATGTCTTGTTCGATTCTGCTACAACCGTGTTTGGACAATGGACCAC CCGAGGGGGTGAGGCGGCTATCGAAAACCCGCTACTCGAATTTAAAGACCAATTCTCAGACCTTTTTGGTCAGGT ATTGATGGGTGCAGCAAAGGAAGAGGTTTCCTTCCGGGTGACTGCCTTGAAAGGCTTCTTGCGTCTGTCGACTTT GCGTGATTACTTCCAGGAGAATGAGATTGGGCTTTTCGTACAATACCTTGACGAAATCCTTCTCAAGGAGGAGTC CGTGGGCCGGGATGATCTCAAGAAAGAGGCAATTGCTGCCCTTGCTGAGATTTCCAAGCACAAGCCCCGCCTGAT TGTGGATATCACTTTCCCTGCATTTGTGGCAACTCTGCCAGAGGAAGATGAAGGGTCGGATGCCCGGTATCTGCC GACGCTCGAGACCCTTGCCCAGATCAGCGTCGAGAGGGACATCTTCGAGACACTTTTCCGTCGTCTTTTCAGCAA ACTGTCCGTTCTGCTGCAAAAGGAGGAACCCGGGTCAGTTGCTTACCCACGTGCGATCCTCGCCACCTTGCTTTA TGTTATGCAACAGAGAAACATGGAACAAGACCAGAGTGTGGATTTGTACTTCGACAAGGTTGTGGTTGGACTTTG CCGCGATGTCGCAGCATCGGCTTCTGGCAAGGCCAAGAATCGGATTTTCAATGATCCTACCGTGCTTGACACTTT GGGTCGACTCTGTAATCTCCTTGTGCGGTCTGTTTCCATTCAGAAACAGGAGCAAGTTGCCGAAAACGTCTACAG CCTCTTCTCTGCAGCTGGAGATTTCGTGCCTCTTCCGTTTACTCAGACTAGAGAAGCCGATCGAGAACGTACGAT CATTATCTCGACATACCTGCTCGCGGGATTATCCAAGGACTGTGGTAACAAGATCCCGCACACCGACCCAGACAT GGCGGGGTTGCTGTTGGATCTGATCTATCGTTGTATCTTGAGCACCGAACCAGCAACACATCAAGCCTACCTGCG CCACCTGGCCTTGCTCGTCAACAAGTTCCTGTCGAAGCAGGATGTGCCAATCGCCGAGAGACTCATTGATTCTCT CCTCGAAGGCGAGAACACAGAATTACAGAGCCTCAGTCCTCCTATCATTCGCACCATCTTCTGGCTATCTAAAGC CTTGATCCTTCGCTTAGCCCCCGCAACAACTCACATCCTGACCTCCCTCCTCGCTCTCCTCTCCTCCCCAGACCA AGAAACCAGCGCGACGGCAGCACAAGGCTTCTCCATAATTCTAGGCGAAGACGATATCATCTCCGCAACCAATGG CGCTACAATCCGCCTCCTGTGCAGACAGCGCCTCTTCACAACAGTCATCCCTTTGATCTCCACTCGCATTCGCGA GGTGAACATCGCCGGCACAGATGGCTCCCACCCCACCCCAAAAGCGCCCGACCATATTAAACCAGCGCACCTAAC CGCCCTCGCGGGTATCCTCTCCACCATCCCCACGGCCCTAGTCATGCCTGAACTCCCCACCCTTCTCCCCCTCCT CCTGCAATCCCTCGACCTCCAGACCGCCGACTCGGTCGCTGTCCGCACAGCAACGCTCGACACCCTCGCCGTCAT CATCCGTGACAACGGCGTCACCGTCATCGACCGGTGCGGCCACGTCCAGAGTCTTGTCACGAGACTCCTCAAAAC AACATCTACAAATATCGGCCCTGGTGCGGTTAACAGCCCCCGTCTCCGCGCCGATGCTTTGAAATGTCTCAATCT CCTCGCTACGCACCAGGTGCCCGGCGCTGCAGCTAATGCTCCGCCGGGTATCTCGCCTCTATTACCTGTCAAGAA TCAGGTTCTGAGGTCCTTGCGAGCCGTTCTTGACGACCCTAAGCGTAATGTACGGAAGGCGGCGGTTGATGCCCG AGCCGCTTGGCTGCGTTGTGTGGATGATGCACCGGACGAGGAAGAATGA |