Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g789.t1
Gene name
Locationscaffold_01:2110064..2111255
Strand-
Gene length (bp)1191
Transcript length (bp)1080
Coding sequence length (bp)1080
Protein length (aa) 360

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00096 zf-C2H2 Zinc finger, C2H2 type 1.0E-02 247 268
PF00096 zf-C2H2 Zinc finger, C2H2 type 9.5E-06 276 299
PF13894 zf-C2H2_4 C2H2-type zinc finger 1.0E-03 276 299
PF13912 zf-C2H2_6 C2H2-type zinc finger 1.2E-02 276 299
PF13912 zf-C2H2_6 C2H2-type zinc finger 7.7E-03 305 323

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 51 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g789.t1
MNRNLVQRTSITSPRREEIQSCEASSIYSSPVSTSSQGGVSPIGLGISRCDIDNGFGQLRAFPTSTLPSQLIPGA
PNPTFALSYDDFAGACYPSVYDGLVNSASETSLGFYSPTTMSASPSYNSGMEIASGQNVFAGQMTDMWMHTPCSG
PTTPSDVVTVPNGAGQWDQSVYSDVCMPSPMPLLSVNDMSYLGAMGEEIGYDGSGINTGQVLQPQASIEGFSDGV
TDPSTIERCASNDRLVSASGLECPICGAKFTRRSNCKEHQKLHNPEWRHNHPCDECHKSFGRSSDLKRHMNTVHL
GLRKYCCDSCDRRFSRQDSLARHDCAEKQRNTAKFTGHVDPSLTPKQRQRVPNHRRSAS*
Coding >Pro_DTO377G3_2|g789.t1
ATGAATCGGAATTTAGTTCAGCGCACCTCAATTACATCCCCGCGAAGAGAGGAGATACAGTCTTGCGAAGCATCC
TCAATATACTCGTCTCCTGTTTCGACCTCGTCCCAGGGAGGTGTTTCCCCTATTGGTCTGGGAATTTCCCGCTGC
GACATCGACAATGGATTCGGTCAACTGAGGGCCTTCCCTACGTCGACACTGCCATCGCAACTGATTCCTGGAGCG
CCAAATCCCACCTTCGCATTATCCTATGACGACTTTGCCGGAGCATGCTATCCATCAGTTTACGATGGACTCGTC
AACAGTGCTTCAGAGACTTCACTGGGGTTCTACAGCCCCACGACGATGAGCGCGTCTCCCAGCTACAACTCTGGC
ATGGAGATTGCCTCTGGCCAGAATGTCTTCGCGGGCCAAATGACCGATATGTGGATGCACACACCTTGCTCGGGA
CCGACAACGCCATCGGATGTGGTCACTGTACCGAACGGCGCAGGACAATGGGACCAGAGTGTGTATTCGGACGTG
TGTATGCCCTCTCCGATGCCCCTATTATCCGTCAACGACATGTCCTACCTTGGGGCGATGGGAGAGGAGATTGGA
TACGATGGATCTGGAATCAACACTGGTCAAGTCTTGCAACCCCAAGCATCTATCGAAGGATTCTCCGATGGTGTC
ACGGACCCGAGTACAATAGAGCGCTGCGCGTCAAATGACAGGCTAGTATCTGCCAGTGGCCTGGAATGTCCAATT
TGTGGCGCAAAATTCACGCGACGCTCCAACTGCAAGGAGCACCAAAAGCTGCACAACCCTGAATGGAGGCACAAC
CATCCTTGCGATGAGTGCCACAAGTCTTTTGGCCGGAGCTCGGATCTCAAACGACACATGAACACCGTTCATCTC
GGGCTTCGGAAGTACTGCTGTGACTCTTGCGACCGGCGTTTCAGTCGTCAGGATAGTCTAGCCAGACATGATTGT
GCGGAGAAGCAGCGCAACACTGCGAAGTTTACCGGCCACGTTGATCCTTCGCTCACGCCCAAGCAACGCCAACGA
GTGCCGAATCACCGCCGCTCAGCTAGCTAG
Transcript >Pro_DTO377G3_2|g789.t1
ATGAATCGGAATTTAGTTCAGCGCACCTCAATTACATCCCCGCGAAGAGAGGAGATACAGTCTTGCGAAGCATCC
TCAATATACTCGTCTCCTGTTTCGACCTCGTCCCAGGGAGGTGTTTCCCCTATTGGTCTGGGAATTTCCCGCTGC
GACATCGACAATGGATTCGGTCAACTGAGGGCCTTCCCTACGTCGACACTGCCATCGCAACTGATTCCTGGAGCG
CCAAATCCCACCTTCGCATTATCCTATGACGACTTTGCCGGAGCATGCTATCCATCAGTTTACGATGGACTCGTC
AACAGTGCTTCAGAGACTTCACTGGGGTTCTACAGCCCCACGACGATGAGCGCGTCTCCCAGCTACAACTCTGGC
ATGGAGATTGCCTCTGGCCAGAATGTCTTCGCGGGCCAAATGACCGATATGTGGATGCACACACCTTGCTCGGGA
CCGACAACGCCATCGGATGTGGTCACTGTACCGAACGGCGCAGGACAATGGGACCAGAGTGTGTATTCGGACGTG
TGTATGCCCTCTCCGATGCCCCTATTATCCGTCAACGACATGTCCTACCTTGGGGCGATGGGAGAGGAGATTGGA
TACGATGGATCTGGAATCAACACTGGTCAAGTCTTGCAACCCCAAGCATCTATCGAAGGATTCTCCGATGGTGTC
ACGGACCCGAGTACAATAGAGCGCTGCGCGTCAAATGACAGGCTAGTATCTGCCAGTGGCCTGGAATGTCCAATT
TGTGGCGCAAAATTCACGCGACGCTCCAACTGCAAGGAGCACCAAAAGCTGCACAACCCTGAATGGAGGCACAAC
CATCCTTGCGATGAGTGCCACAAGTCTTTTGGCCGGAGCTCGGATCTCAAACGACACATGAACACCGTTCATCTC
GGGCTTCGGAAGTACTGCTGTGACTCTTGCGACCGGCGTTTCAGTCGTCAGGATAGTCTAGCCAGACATGATTGT
GCGGAGAAGCAGCGCAACACTGCGAAGTTTACCGGCCACGTTGATCCTTCGCTCACGCCCAAGCAACGCCAACGA
GTGCCGAATCACCGCCGCTCAGCTAGCTAG
Gene >Pro_DTO377G3_2|g789.t1
ATGAATCGGAATTTAGTTCAGCGCACCTCAATTACATCCCCGCGAAGAGAGGAGATACAGTCTTGCGAAGCATCC
TCAATATACTCGTCTCCTGTTTCGACCTCGTCCCAGGGAGGTGTTTCCCCTATTGGTCTGGGAATTTCCCGCTGC
GACATCGACAATGGATTCGGTCAACTGAGGGCCTTCCCTACGTCGACACTGCCATCGCAACTGATTCCTGGAGCG
CCAAATCCCACCTTCGCATTATCCTATGACGACTTTGCCGGAGCATGCTATCCATCAGTTTACGATGGACTCGTC
AACAGTGCTTCAGAGACTTCACTGGGGTTCTACAGCCCCACGACGATGAGCGCGTCTCCCAGCTACAACTCTGGC
ATGGAGATTGCCTCTGGCCAGAATGTCTTCGCGGGCCAAATGACCGATATGTGGATGCACACACCTTGCTCGGGA
CCGACAACGCCATCGGATGTGGTCACTGTACCGAACGGCGCAGGACAATGGGACCAGAGTGTGTATTCGGACGTG
TGTATGCCCTCTCCGATGCCCCTATTATCCGTCAACGACATGTCCTACCTTGGGGCGATGGGAGAGGAGATTGGA
TACGATGGATCTGGAATCAACACTGGTCAAGTCTTGCAACCCCAAGCATCTATCGAAGGATTCTCCGATGGTGTC
ACGGACCCGAGTACAATAGAGCGCTGCGCGTCAAATGACAGGCTAGTATCTGCCAGTGGCCTGGAATGTCCAATT
TGTGGCGCAAAATTCACGCGACGCTCCAACTGCAAGGAGCACCAAAAGCTGCACAACCCTGAATGGAGGCACAAC
CATCCTTGCGATGAGTGCCACAAGTCTTTTGGCCGGAGCTCGGATCTCAAACGACACATGAACACCGTGAGTAGG
GAGGCCAGACGGAATCAAGCATAGACACTAACAAGGTCTCTAGGTTCATCTCGGGCTTCGGAAGTACTGCTGTGA
CTCTTGCGACCGGCGTTTCAGTCGTCAGGATAGTCTAGCCAGGTAAGAACCCAGAATATTTATCCTTGAATGTGT
ACTCGTGGGACTAATATGAGCAATAGACATGATTGTGCGGAGAAGCAGCGCAACACTGCGAAGTTTACCGGCCAC
GTTGATCCTTCGCTCACGCCCAAGCAACGCCAACGAGTGCCGAATCACCGCCGCTCAGCTAGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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