Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280

General Properties

Protein ID	Pro_DTO377G3_2|g7884.t1
Gene name
Location	scaffold_27:63298..65421
Strand	+
Gene length (bp)	2123
Transcript length (bp)	1665
Coding sequence length (bp)	1665
Protein length (aa)	555

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00006	ATP-synt_ab	ATP synthase alpha/beta family, nucleotide-binding domain	4.1E-72	191	416
PF00306	ATP-synt_ab_C	ATP synthase alpha/beta chain, C terminal domain	7.0E-48	423	548
PF02874	ATP-synt_ab_N	ATP synthase alpha/beta family, beta-barrel domain	2.4E-14	68	134

GO

GO Term	Description	Terminal node
GO:0015986	ATP synthesis coupled proton transport	Yes
GO:0046034	ATP metabolic process	Yes
GO:0005524	ATP binding	Yes
GO:1902600	proton transmembrane transport	Yes
GO:1901265	nucleoside phosphate binding	No
GO:0009259	ribonucleotide metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0032553	ribonucleotide binding	No
GO:0098655	cation transmembrane transport	No
GO:0009260	ribonucleotide biosynthetic process	No
GO:0019637	organophosphate metabolic process	No
GO:0009144	purine nucleoside triphosphate metabolic process	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:1901363	heterocyclic compound binding	No
GO:0018130	heterocycle biosynthetic process	No
GO:0009117	nucleotide metabolic process	No
GO:0009199	ribonucleoside triphosphate metabolic process	No
GO:0097367	carbohydrate derivative binding	No
GO:0006753	nucleoside phosphate metabolic process	No
GO:0008152	metabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0009150	purine ribonucleotide metabolic process	No
GO:0006163	purine nucleotide metabolic process	No
GO:1901293	nucleoside phosphate biosynthetic process	No
GO:0072522	purine-containing compound biosynthetic process	No
GO:0009142	nucleoside triphosphate biosynthetic process	No
GO:0046390	ribose phosphate biosynthetic process	No
GO:0051234	establishment of localization	No
GO:0044238	primary metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0017076	purine nucleotide binding	No
GO:0008150	biological_process	No
GO:0009205	purine ribonucleoside triphosphate metabolic process	No
GO:0008144	drug binding	No
GO:1901137	carbohydrate derivative biosynthetic process	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0009206	purine ribonucleoside triphosphate biosynthetic process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0009152	purine ribonucleotide biosynthetic process	No
GO:0009165	nucleotide biosynthetic process	No
GO:0006812	cation transport	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0046483	heterocycle metabolic process	No
GO:0055086	nucleobase-containing small molecule metabolic process	No
GO:0098662	inorganic cation transmembrane transport	No
GO:0098660	inorganic ion transmembrane transport	No
GO:0044281	small molecule metabolic process	No
GO:0009201	ribonucleoside triphosphate biosynthetic process	No
GO:0003674	molecular_function	No
GO:0006796	phosphate-containing compound metabolic process	No
GO:0017144	drug metabolic process	No
GO:0051179	localization	No
GO:0006793	phosphorus metabolic process	No
GO:0097159	organic cyclic compound binding	No
GO:0055085	transmembrane transport	No
GO:0030554	adenyl nucleotide binding	No
GO:0009987	cellular process	No
GO:0009141	nucleoside triphosphate metabolic process	No
GO:0044249	cellular biosynthetic process	No
GO:0006810	transport	No
GO:1901135	carbohydrate derivative metabolic process	No
GO:1901576	organic substance biosynthetic process	No
GO:0044271	cellular nitrogen compound biosynthetic process	No
GO:0009058	biosynthetic process	No
GO:0005488	binding	No
GO:0044237	cellular metabolic process	No
GO:0006164	purine nucleotide biosynthetic process	No
GO:0019693	ribose phosphate metabolic process	No
GO:0043167	ion binding	No
GO:0019438	aromatic compound biosynthetic process	No
GO:0006811	ion transport	No
GO:0015672	monovalent inorganic cation transport	No
GO:0036094	small molecule binding	No
GO:0015985	energy coupled proton transport, down electrochemical gradient	No
GO:1901362	organic cyclic compound biosynthetic process	No
GO:0072521	purine-containing compound metabolic process	No
GO:0032555	purine ribonucleotide binding	No
GO:0000166	nucleotide binding	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0009145	purine nucleoside triphosphate biosynthetic process	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0043168	anion binding	No
GO:0034220	ion transmembrane transport	No
GO:1901566	organonitrogen compound biosynthetic process	No
GO:0090407	organophosphate biosynthetic process	No
GO:0034654	nucleobase-containing compound biosynthetic process	No
GO:0006754	ATP biosynthetic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 31	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g7884.t1 MFRNALRSSSRSVAAVSATGRIASVRAAAAGPLNGVRSYASEAKATPTEVSSILEQRIRGVSEEAGLAETGRVLS VGDGIARVHGMTNVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVDVPVGPELLGRVV DGLGNPIDGKGPLGTKETRRAQLKAPGILPRQSVSQPVQTGLKCVDSMVPIGRGQRELIIGDRQTGKTAVALDTM LNQKRWNNKSGSTEEEKLYCIYVAVGQKRSTVAQLVKTLEEQDAMKYSIIVAATASEAAPLQYIAPFTGCAMGEW FRDNGRHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNKTHGAGSLTALPIIETQG GDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYREVAAFAQF GSDLDASTKQTLARGERLTELLKQKQYSPMSVTDMVPLIFAGVNGLLDTIPVDKILTWESDLLAHLKSTHPEIQA TIEKEGQVSKETEATLKKTIAAFNATFNA*
Coding	>Pro_DTO377G3_2|g7884.t1 ATGTTCAGAAACGCTCTGCGGTCGTCCAGCCGCTCCGTTGCGGCTGTTTCGGCCACTGGCCGCATCGCCTCGGTC CGCGCGGCTGCTGCCGGTCCTCTCAACGGCGTTCGCTCGTACGCTTCCGAGGCCAAGGCTACCCCTACTGAGGTC TCCTCCATCCTTGAGCAGCGCATCCGTGGTGTCTCTGAGGAGGCTGGTCTCGCTGAGACTGGTCGTGTCCTGTCG GTCGGTGATGGTATCGCCCGTGTCCACGGCATGACCAACGTCCAGGCTGAGGAGCTGGTTGAGTTCGCCTCCGGC GTTAAGGGTATGTGCATGAACCTCGAGGCTGGCCAGGTCGGTGTCGTGCTTTTCGGTTCCGACCGTCTCGTCAAG GAGGGTGAGACTGTCAAGCGTACCGGCGAGATTGTCGATGTCCCCGTCGGTCCCGAGCTTCTCGGCCGTGTCGTC GATGGTCTCGGTAACCCCATTGATGGCAAGGGTCCCCTTGGCACCAAGGAGACTCGCCGTGCCCAGCTTAAGGCC CCCGGTATTCTGCCCCGTCAGTCCGTCAGCCAGCCAGTGCAGACTGGTTTGAAGTGTGTCGACTCCATGGTGCCC ATTGGTCGTGGTCAGCGTGAGTTGATCATTGGTGATCGTCAGACCGGTAAGACCGCTGTCGCTCTCGACACCATG CTCAACCAGAAGCGTTGGAACAACAAGTCCGGCTCTACCGAGGAGGAGAAGCTCTACTGTATCTACGTTGCCGTT GGTCAGAAGCGTTCGACTGTCGCTCAGCTCGTCAAGACCCTTGAGGAGCAGGATGCCATGAAGTACTCGATTATC GTTGCTGCCACCGCCTCCGAGGCCGCCCCCCTGCAGTACATTGCTCCCTTCACTGGCTGCGCCATGGGTGAGTGG TTCCGTGACAACGGCCGCCACGCCGTCATCGTCTACGATGATCTGTCCAAGCAGGCCGTTGCCTACCGTCAGATG TCTCTGCTGCTCCGTCGTCCCCCCGGACGTGAGGCCTACCCCGGTGACGTTTTCTACCTGCACTCTCGTCTCCTC GAGCGTGCCGCCAAGATGAACAAGACTCACGGTGCTGGTTCCTTGACTGCCCTGCCCATCATTGAGACCCAGGGT GGTGATGTGTCCGCTTACATTCCCACCAACGTCATTTCCATCACTGACGGTCAGATCTTCTTGGAGTCCGAGCTG TTCTACAAGGGTATCCGTCCCGCCATTAACGTCGGTCTGTCCGTGTCCCGTGTCGGTTCCGCCGCCCAGGTCAAG GCCATGAAGCAGGTCGCCGGTTCCCTCAAGCTGTTCTTGGCTCAGTACCGTGAGGTCGCTGCCTTCGCTCAGTTC GGTTCCGATCTTGATGCCTCCACCAAGCAGACCCTTGCCCGTGGTGAGCGTCTGACTGAGCTCCTCAAGCAGAAG CAGTACTCCCCCATGTCCGTTACCGACATGGTTCCTCTCATCTTCGCCGGTGTTAACGGTCTCCTCGACACCATC CCCGTCGACAAGATCCTCACCTGGGAGTCTGACCTCCTTGCTCACCTCAAGAGCACCCACCCCGAGATCCAGGCT ACCATTGAGAAGGAGGGCCAGGTCTCCAAGGAGACTGAGGCCACCCTCAAGAAGACCATCGCTGCCTTCAACGCC ACCTTCAACGCATAA
Transcript	>Pro_DTO377G3_2|g7884.t1 ATGTTCAGAAACGCTCTGCGGTCGTCCAGCCGCTCCGTTGCGGCTGTTTCGGCCACTGGCCGCATCGCCTCGGTC CGCGCGGCTGCTGCCGGTCCTCTCAACGGCGTTCGCTCGTACGCTTCCGAGGCCAAGGCTACCCCTACTGAGGTC TCCTCCATCCTTGAGCAGCGCATCCGTGGTGTCTCTGAGGAGGCTGGTCTCGCTGAGACTGGTCGTGTCCTGTCG GTCGGTGATGGTATCGCCCGTGTCCACGGCATGACCAACGTCCAGGCTGAGGAGCTGGTTGAGTTCGCCTCCGGC GTTAAGGGTATGTGCATGAACCTCGAGGCTGGCCAGGTCGGTGTCGTGCTTTTCGGTTCCGACCGTCTCGTCAAG GAGGGTGAGACTGTCAAGCGTACCGGCGAGATTGTCGATGTCCCCGTCGGTCCCGAGCTTCTCGGCCGTGTCGTC GATGGTCTCGGTAACCCCATTGATGGCAAGGGTCCCCTTGGCACCAAGGAGACTCGCCGTGCCCAGCTTAAGGCC CCCGGTATTCTGCCCCGTCAGTCCGTCAGCCAGCCAGTGCAGACTGGTTTGAAGTGTGTCGACTCCATGGTGCCC ATTGGTCGTGGTCAGCGTGAGTTGATCATTGGTGATCGTCAGACCGGTAAGACCGCTGTCGCTCTCGACACCATG CTCAACCAGAAGCGTTGGAACAACAAGTCCGGCTCTACCGAGGAGGAGAAGCTCTACTGTATCTACGTTGCCGTT GGTCAGAAGCGTTCGACTGTCGCTCAGCTCGTCAAGACCCTTGAGGAGCAGGATGCCATGAAGTACTCGATTATC GTTGCTGCCACCGCCTCCGAGGCCGCCCCCCTGCAGTACATTGCTCCCTTCACTGGCTGCGCCATGGGTGAGTGG TTCCGTGACAACGGCCGCCACGCCGTCATCGTCTACGATGATCTGTCCAAGCAGGCCGTTGCCTACCGTCAGATG TCTCTGCTGCTCCGTCGTCCCCCCGGACGTGAGGCCTACCCCGGTGACGTTTTCTACCTGCACTCTCGTCTCCTC GAGCGTGCCGCCAAGATGAACAAGACTCACGGTGCTGGTTCCTTGACTGCCCTGCCCATCATTGAGACCCAGGGT GGTGATGTGTCCGCTTACATTCCCACCAACGTCATTTCCATCACTGACGGTCAGATCTTCTTGGAGTCCGAGCTG TTCTACAAGGGTATCCGTCCCGCCATTAACGTCGGTCTGTCCGTGTCCCGTGTCGGTTCCGCCGCCCAGGTCAAG GCCATGAAGCAGGTCGCCGGTTCCCTCAAGCTGTTCTTGGCTCAGTACCGTGAGGTCGCTGCCTTCGCTCAGTTC GGTTCCGATCTTGATGCCTCCACCAAGCAGACCCTTGCCCGTGGTGAGCGTCTGACTGAGCTCCTCAAGCAGAAG CAGTACTCCCCCATGTCCGTTACCGACATGGTTCCTCTCATCTTCGCCGGTGTTAACGGTCTCCTCGACACCATC CCCGTCGACAAGATCCTCACCTGGGAGTCTGACCTCCTTGCTCACCTCAAGAGCACCCACCCCGAGATCCAGGCT ACCATTGAGAAGGAGGGCCAGGTCTCCAAGGAGACTGAGGCCACCCTCAAGAAGACCATCGCTGCCTTCAACGCC ACCTTCAACGCATAA
Gene	>Pro_DTO377G3_2|g7884.t1 ATGTTCAGAAACGCTCTGCGGTCGTCCAGCCGCTCCGTTGCGGCTGTTTCGGCCACTGGCCGCATCGCCTCGGTG AGTCTATCCCATCCCAGCCGCCTTCGTCCATCGCCAGTTCGACATCCTTCATCTCAATCCTGAGCTCGATTGATC CTCATACCTCCTCACACCTCGACAATAATACATCAACAATAGCTAGGACGCATTGTCCTTCTCTGGGATGGTCAT TAACAGGTTTTTCGTCAATTACAGGTCCGCGCGGCTGCTGCCGGTCCTCTCAACGGCGTTCGCTCGTACGCTTCC GAGGCCAAGGCTACCCCTACTGAGGTCTCCTCCATCCTTGAGCAGCGCATCCGTGGTGTCTCTGAGGAGGCTGGT CTCGCTGAGACTGGTCGTGTCCTGTCGGTCGGGTACGTCAATTCTCCCTAGGCGGCTGGGGGCGCGAAGAAAAAT TCGGTCCCCGGTTACAATGCCATTGAATCCGCCATTATTTCTCAACATTCGAAAAATTACCGATACAGAAACTAA TTGAACTTCAAACAGTGATGGTATCGCCCGTGTCCACGGCATGACCAACGTCCAGGCTGAGGAGCTGGTTGAGTA CGTGAACCCCCAAAGTCTTGGCATTATGCCTATTCAAAAAACTAACTTATCTTCAGGTTCGCCTCCGGCGTTAAG GGTATGTGCATGAACCTCGAGGCTGGCCAGGTCGGTGTCGTGCTTTTCGGTTCCGACCGTCTCGTCAAGGAGGGT GAGACTGTCAAGCGTACCGGCGAGATTGTAAGCACTTCAATCCAACCCCTAGGTTCATTCTTATACTTGGACATT GAATCTATCCACGTATGGCAATTCTCTAACACGATCCCCAGGTCGATGTCCCCGTCGGTCCCGAGCTTCTCGGCC GTGTCGTCGATGGTCTCGGTAACCCCATTGATGGCAAGGGTCCCCTTGGCACCAAGGAGACTCGCCGTGCCCAGC TTAAGGCCCCCGGTATTCTGCCCCGTCAGTCCGTCAGCCAGCCAGTGCAGACTGGTTTGAAGTGTGTCGACTCCA TGGTGCCCATTGGTCGTGGTCAGCGTGAGTTGATCATTGGTGATCGTCAGACCGGTAAGACCGCTGTCGCTCTCG ACACCATGCTCAACCAGAAGCGTTGGAACAACAAGTCCGGCTCTACCGAGGAGGAGAAGCTCTACTGTATCTACG TTGCCGTTGGTCAGAAGCGTTCGACTGTCGCTCAGCTCGTCAAGACCCTTGAGGAGCAGGATGCCATGAAGTACT CGATTATCGTTGCTGCCACCGCCTCCGAGGCCGCCCCCCTGCAGTACATTGCTCCCTTCACTGGCTGCGCCATGG GTGAGTGGTTCCGTGACAACGGCCGCCACGCCGTCATCGTCTACGATGATCTGTCCAAGCAGGCCGTTGCCTACC GTCAGATGTCTCTGCTGCTCCGTCGTCCCCCCGGACGTGAGGCCTACCCCGGTGACGTTTTCTACCTGCACTCTC GTCTCCTCGAGCGTGCCGCCAAGATGAACAAGACTCACGGTGCTGGTTCCTTGACTGCCCTGCCCATCATTGAGA CCCAGGGTGGTGATGTGTCCGCTTACATTCCCACCAACGTCATTTCCATCACTGACGGTCAGATCTTCTTGGAGT CCGAGCTGTTCTACAAGGGTATCCGTCCCGCCATTAACGTCGGTCTGTCCGTGTCCCGTGTCGGTTCCGCCGCCC AGGTCAAGGCCATGAAGCAGGTCGCCGGTTCCCTCAAGCTGTTCTTGGCTCAGTACCGTGAGGTCGCTGCCTTCG CTCAGTTCGGTTCCGATCTTGATGCCTCCACCAAGCAGACCCTTGCCCGTGGTGAGCGTCTGACTGAGCTCCTCA AGCAGAAGCAGTACTCCCCCATGTCCGTTACCGACATGGTTCCTCTCATCTTCGCCGGTGTTAACGGTCTCCTCG ACACCATCCCCGTCGACAAGATCCTCACCTGGGAGTCTGACCTCCTTGCTCACCTCAAGAGCACCCACCCCGAGA TCCAGGCTACCATTGAGAAGGAGGGCCAGGTCTCCAAGGAGACTGAGGCCACCCTCAAGAAGACCATCGCTGCCT TCAACGCCACCTTCAACGCATAA