Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7844.t1
Gene name
Locationscaffold_26:258455..261223
Strand+
Gene length (bp)2768
Transcript length (bp)2700
Coding sequence length (bp)2700
Protein length (aa) 900

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01487 DHquinase_I Type I 3-dehydroquinase 1.5E-35 306 547
PF01202 SKI Shikimate kinase 2.1E-19 97 207
PF08501 Shikimate_dh_N Shikimate dehydrogenase substrate binding domain 3.0E-18 560 640
PF18317 SDH_C Shikimate 5'-dehydrogenase C-terminal domain 5.8E-10 842 872
PF01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase 3.6E-06 700 747

GO

GO Term Description Terminal node
GO:0003855 3-dehydroquinate dehydratase activity Yes
GO:0055114 oxidation-reduction process Yes
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity Yes
GO:0008150 biological_process No
GO:0016835 carbon-oxygen lyase activity No
GO:0016829 lyase activity No
GO:0008152 metabolic process No
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0016836 hydro-lyase activity No
GO:0003674 molecular_function No
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7844.t1
MSMLVRPPKRKLHEVETLDDGPRKYSPGVVPPHTILPSSQPPSRPSSERTQASGYSHPPSLKELNSNRGSPILFE
QGHLQTPRTFSPKASVVLIGIRGTGKSSLAVILAATSGRRLIDADRYFHQTVGCSRAEFKKENDGSVYRLQEARV
FESMLADNQDGCVIACGAGSMERNGQRLLREYAQTHPVIHVVRDAESIQSYLKAWDTQKVRHFLELSGPIYRGCS
NLEFFNLSEARSDSDVASPTYRTEPRSHTPIPFLTLKRVQRDFLRFIAFITGDIAELNSQHASFPLSLLPVESRM
YTSAVSVPFSKICEKGMDIEQLEFTADAFELAVDVTDSSGQPGLSSSLADSISQAVATIRRNIIVPLIYHVESYT
TPTGSLSPNQVPLRCTDETYLNLVRHGLRLSTGFLTVDLTRDDNIISQIISSSGRTRIIGHFEAFHPLPGGWDGD
EYMEVYERAKSLGCDIVRLCQPAETPEDNLAVQRFRHRIQSLPVAGISLIAYNTGPLGRMSRCFNPILSPVTHPS
LVTELPTHLRSYITAREVQKALYSSFALDPMQFFVFGANTTYSMSPAMHNTAFKICGLPHNYSIHQSPTLRGLNE
LVENQYFGGSSVSLPYKTECIPLLHSMSAHARAIGAVNTLIPIRNLDDLDDNRLQESSVFLQKSRAGPIKGLHGD
NTDWIGICNCIRRGLSPANAIRSSSTGLVIGSGGMARAAIYSMIHLGVQNIFVYNRTIANAERLAHHYNRQDLHS
KEASGSGRPTVRIIASLSDPWPADFKQPTIVVSGIPAHSIGGELAPNFHMPAQWLESPTGGVVVDLAYKPLNTPL
MKQTRALSHRGWVALDGLDVLPEQGFAQFELFTGRRAPRRVMRSIVLQEYKDDEGNNDHEAIRDRLQQMDGQPT*
Coding >Pro_DTO377G3_2|g7844.t1
ATGTCCATGTTGGTACGCCCACCGAAACGAAAGCTCCACGAAGTCGAGACTTTAGATGATGGGCCTCGAAAGTAT
AGCCCAGGCGTCGTGCCCCCTCACACTATTCTCCCCTCATCTCAACCACCTTCACGTCCATCGAGTGAACGCACA
CAAGCATCCGGATATTCGCATCCACCGTCGCTCAAAGAATTGAACTCCAACCGCGGATCTCCAATACTGTTTGAA
CAGGGCCATCTTCAGACCCCACGGACCTTCAGTCCGAAGGCATCTGTCGTGTTGATCGGAATCCGTGGCACGGGA
AAGTCAAGTCTGGCGGTCATTCTCGCGGCGACATCCGGTCGACGATTGATTGATGCAGACCGCTATTTTCATCAG
ACTGTGGGATGTTCCCGTGCTGAGTTTAAGAAGGAAAATGATGGATCTGTTTACCGACTACAAGAGGCCCGGGTC
TTTGAGTCGATGCTAGCAGACAACCAGGATGGGTGTGTGATTGCGTGCGGGGCCGGGTCGATGGAACGCAATGGC
CAACGACTTCTTAGGGAATATGCGCAGACGCATCCTGTTATCCACGTTGTTAGAGATGCAGAGAGCATCCAGTCA
TATCTCAAAGCGTGGGATACGCAAAAGGTGCGACATTTCCTAGAATTGTCCGGACCGATATACCGAGGGTGCTCG
AATCTCGAATTTTTCAATCTGTCAGAGGCCAGAAGTGATAGCGATGTTGCATCACCGACGTATCGAACAGAACCT
AGGTCACATACTCCCATTCCGTTTTTAACATTGAAACGAGTTCAGCGGGACTTTCTCCGGTTCATCGCCTTCATA
ACCGGGGACATTGCAGAACTTAACAGCCAGCATGCATCTTTCCCGCTGTCGCTGTTGCCTGTGGAATCTCGTATG
TACACATCTGCAGTGTCAGTGCCATTTTCTAAGATTTGTGAGAAGGGCATGGATATTGAGCAGCTGGAATTCACC
GCCGATGCCTTCGAACTGGCAGTCGATGTAACAGACTCTTCTGGTCAGCCAGGCCTCAGCTCAAGTCTTGCGGAC
AGTATTAGTCAGGCGGTAGCAACAATCCGTCGCAACATCATTGTGCCGTTGATATATCATGTGGAAAGCTATACC
ACCCCTACAGGATCTCTGTCTCCCAATCAAGTTCCCTTGAGATGTACCGATGAAACGTACCTAAACCTCGTCCGC
CATGGCTTGCGACTCTCCACCGGTTTCCTCACAGTTGACCTCACCCGGGATGACAATATCATTTCCCAGATCATC
TCCTCAAGTGGACGAACCAGGATCATTGGCCACTTCGAAGCCTTCCATCCTCTGCCCGGGGGTTGGGATGGCGAT
GAGTATATGGAAGTTTATGAGCGGGCTAAAAGCCTAGGATGCGACATAGTCCGACTATGCCAACCGGCTGAGACA
CCCGAAGACAACCTCGCGGTGCAAAGATTTCGCCATCGCATCCAAAGCCTGCCAGTTGCTGGCATTTCGCTGATC
GCCTATAACACCGGTCCTCTTGGCCGCATGTCTCGTTGCTTCAATCCTATTCTCTCCCCAGTCACACATCCGTCC
TTGGTAACGGAACTTCCAACTCACCTACGATCGTATATCACAGCCCGCGAAGTGCAGAAGGCGCTCTATAGCTCA
TTTGCCTTGGACCCGATGCAATTCTTCGTCTTTGGCGCCAACACCACATACAGTATGTCGCCCGCGATGCACAAC
ACGGCTTTCAAAATCTGCGGTTTGCCGCACAATTACTCCATTCACCAATCACCTACTCTACGGGGATTAAATGAA
CTTGTGGAAAATCAATACTTCGGAGGATCGAGTGTCAGTCTTCCATACAAAACAGAGTGTATCCCTCTCCTCCAC
TCAATGTCTGCGCATGCACGAGCTATCGGTGCCGTCAATACCCTCATCCCCATCCGCAACCTTGATGACCTGGAC
GACAACCGTCTTCAAGAATCTTCAGTCTTTCTCCAAAAGAGCCGTGCCGGCCCTATCAAGGGACTTCACGGTGAT
AACACCGATTGGATTGGTATCTGCAATTGCATTCGCCGCGGTCTGTCTCCGGCAAATGCGATACGCTCATCATCG
ACAGGTCTTGTCATCGGATCTGGTGGAATGGCCCGTGCTGCAATTTACTCCATGATCCATCTTGGTGTGCAAAAT
ATCTTTGTCTACAACCGTACGATCGCCAATGCGGAAAGACTGGCCCACCACTACAACCGGCAAGATCTACACTCA
AAAGAAGCCAGCGGGTCTGGCCGTCCCACAGTTCGCATTATTGCTTCATTATCCGACCCCTGGCCTGCCGATTTC
AAACAGCCGACGATCGTTGTCTCAGGAATTCCGGCTCATAGCATTGGCGGCGAGCTAGCACCTAATTTCCATATG
CCAGCACAATGGCTAGAGAGCCCGACAGGTGGCGTTGTTGTTGACCTCGCATACAAGCCCCTCAATACCCCTCTC
ATGAAACAAACACGAGCCCTATCCCATCGCGGTTGGGTAGCCCTGGATGGCCTTGATGTTCTGCCAGAACAAGGC
TTCGCTCAGTTTGAACTGTTCACTGGCCGCCGCGCTCCTAGGCGCGTTATGCGGAGCATTGTGCTTCAAGAGTAC
AAAGACGATGAAGGGAATAATGATCATGAAGCGATACGAGACAGGTTACAGCAAATGGATGGACAGCCGACTTGA
Transcript >Pro_DTO377G3_2|g7844.t1
ATGTCCATGTTGGTACGCCCACCGAAACGAAAGCTCCACGAAGTCGAGACTTTAGATGATGGGCCTCGAAAGTAT
AGCCCAGGCGTCGTGCCCCCTCACACTATTCTCCCCTCATCTCAACCACCTTCACGTCCATCGAGTGAACGCACA
CAAGCATCCGGATATTCGCATCCACCGTCGCTCAAAGAATTGAACTCCAACCGCGGATCTCCAATACTGTTTGAA
CAGGGCCATCTTCAGACCCCACGGACCTTCAGTCCGAAGGCATCTGTCGTGTTGATCGGAATCCGTGGCACGGGA
AAGTCAAGTCTGGCGGTCATTCTCGCGGCGACATCCGGTCGACGATTGATTGATGCAGACCGCTATTTTCATCAG
ACTGTGGGATGTTCCCGTGCTGAGTTTAAGAAGGAAAATGATGGATCTGTTTACCGACTACAAGAGGCCCGGGTC
TTTGAGTCGATGCTAGCAGACAACCAGGATGGGTGTGTGATTGCGTGCGGGGCCGGGTCGATGGAACGCAATGGC
CAACGACTTCTTAGGGAATATGCGCAGACGCATCCTGTTATCCACGTTGTTAGAGATGCAGAGAGCATCCAGTCA
TATCTCAAAGCGTGGGATACGCAAAAGGTGCGACATTTCCTAGAATTGTCCGGACCGATATACCGAGGGTGCTCG
AATCTCGAATTTTTCAATCTGTCAGAGGCCAGAAGTGATAGCGATGTTGCATCACCGACGTATCGAACAGAACCT
AGGTCACATACTCCCATTCCGTTTTTAACATTGAAACGAGTTCAGCGGGACTTTCTCCGGTTCATCGCCTTCATA
ACCGGGGACATTGCAGAACTTAACAGCCAGCATGCATCTTTCCCGCTGTCGCTGTTGCCTGTGGAATCTCGTATG
TACACATCTGCAGTGTCAGTGCCATTTTCTAAGATTTGTGAGAAGGGCATGGATATTGAGCAGCTGGAATTCACC
GCCGATGCCTTCGAACTGGCAGTCGATGTAACAGACTCTTCTGGTCAGCCAGGCCTCAGCTCAAGTCTTGCGGAC
AGTATTAGTCAGGCGGTAGCAACAATCCGTCGCAACATCATTGTGCCGTTGATATATCATGTGGAAAGCTATACC
ACCCCTACAGGATCTCTGTCTCCCAATCAAGTTCCCTTGAGATGTACCGATGAAACGTACCTAAACCTCGTCCGC
CATGGCTTGCGACTCTCCACCGGTTTCCTCACAGTTGACCTCACCCGGGATGACAATATCATTTCCCAGATCATC
TCCTCAAGTGGACGAACCAGGATCATTGGCCACTTCGAAGCCTTCCATCCTCTGCCCGGGGGTTGGGATGGCGAT
GAGTATATGGAAGTTTATGAGCGGGCTAAAAGCCTAGGATGCGACATAGTCCGACTATGCCAACCGGCTGAGACA
CCCGAAGACAACCTCGCGGTGCAAAGATTTCGCCATCGCATCCAAAGCCTGCCAGTTGCTGGCATTTCGCTGATC
GCCTATAACACCGGTCCTCTTGGCCGCATGTCTCGTTGCTTCAATCCTATTCTCTCCCCAGTCACACATCCGTCC
TTGGTAACGGAACTTCCAACTCACCTACGATCGTATATCACAGCCCGCGAAGTGCAGAAGGCGCTCTATAGCTCA
TTTGCCTTGGACCCGATGCAATTCTTCGTCTTTGGCGCCAACACCACATACAGTATGTCGCCCGCGATGCACAAC
ACGGCTTTCAAAATCTGCGGTTTGCCGCACAATTACTCCATTCACCAATCACCTACTCTACGGGGATTAAATGAA
CTTGTGGAAAATCAATACTTCGGAGGATCGAGTGTCAGTCTTCCATACAAAACAGAGTGTATCCCTCTCCTCCAC
TCAATGTCTGCGCATGCACGAGCTATCGGTGCCGTCAATACCCTCATCCCCATCCGCAACCTTGATGACCTGGAC
GACAACCGTCTTCAAGAATCTTCAGTCTTTCTCCAAAAGAGCCGTGCCGGCCCTATCAAGGGACTTCACGGTGAT
AACACCGATTGGATTGGTATCTGCAATTGCATTCGCCGCGGTCTGTCTCCGGCAAATGCGATACGCTCATCATCG
ACAGGTCTTGTCATCGGATCTGGTGGAATGGCCCGTGCTGCAATTTACTCCATGATCCATCTTGGTGTGCAAAAT
ATCTTTGTCTACAACCGTACGATCGCCAATGCGGAAAGACTGGCCCACCACTACAACCGGCAAGATCTACACTCA
AAAGAAGCCAGCGGGTCTGGCCGTCCCACAGTTCGCATTATTGCTTCATTATCCGACCCCTGGCCTGCCGATTTC
AAACAGCCGACGATCGTTGTCTCAGGAATTCCGGCTCATAGCATTGGCGGCGAGCTAGCACCTAATTTCCATATG
CCAGCACAATGGCTAGAGAGCCCGACAGGTGGCGTTGTTGTTGACCTCGCATACAAGCCCCTCAATACCCCTCTC
ATGAAACAAACACGAGCCCTATCCCATCGCGGTTGGGTAGCCCTGGATGGCCTTGATGTTCTGCCAGAACAAGGC
TTCGCTCAGTTTGAACTGTTCACTGGCCGCCGCGCTCCTAGGCGCGTTATGCGGAGCATTGTGCTTCAAGAGTAC
AAAGACGATGAAGGGAATAATGATCATGAAGCGATACGAGACAGGTTACAGCAAATGGATGGACAGCCGACTTGA
Gene >Pro_DTO377G3_2|g7844.t1
ATGTCCATGTTGGTACGCCCACCGAAACGAAAGCTCCACGAAGTCGAGACTTTAGATGATGGGCCTCGAAAGTAT
AGCCCAGGCGTCGTGCCCCCTCACACTATTCTCCCCTCATCTCAACCACCTTCACGTCCATCGAGTGAACGCACA
CAAGCATCCGGATATTCGCATCCACCGTCGCTCAAAGAATTGAACTCCAACCGCGGATCTCCAATACTGTTTGAA
CAGGGCCATCTTCAGACCCCACGGACCTTCAGTCCGAAGGCATCTGTCGTGTTGATCGGAATCCGTGGCACGGGA
AAGTCAAGTCTGGCGGTCATTCTCGCGGCGACATCCGGTCGACGATTGATTGATGCAGACCGCTATTTTCATCAG
ACTGTGGGATGTTCCCGTGCTGAGTTTAAGAAGGAAAATGATGGATCTGTTTACCGACTACAAGAGGCCCGGGTC
TTTGAGTCGATGCTAGCAGACAACCAGGATGGGTGTGTGATTGCGTGCGGGGCCGGGTCGATGGAACGCAATGGC
CAACGACTTCTTAGGGAATATGCGCAGACGCATCCTGTTATCCACGTTGTTAGAGATGCAGAGAGCATCCAGTCA
TATCTCAAAGCGTGGGATACGCAAAAGGTGCGACATTTCCTAGAATTGTCCGGACCGATATACCGAGGGTGCTCG
AATCTCGAATTTTTCAATCTGTCAGAGGCCAGAAGTGATAGCGATGTTGCATCACCGACGTATCGAACAGAACCT
AGGTCACATACTCCCATTCCGTTTTTAACATTGAAACGAGTTCAGCGGGACTTTCTCCGGTTCATCGCCTTCATA
ACCGGGGACATTGCAGAACTTAACAGCCAGCATGCATCTTTCCCGCTGTCGCTGTTGCCTGTGGAATCTCGTATG
TACACATCTGCAGTGTCAGTGCCATTTTCTAAGATTTGTGAGAAGGGCATGGATATTGAGCAGCTGGAATTCACC
GCCGATGCCTTCGAACTGGCAGTCGATGTAACAGACTCTTCTGGTCAGCCAGGCCTCAGCTCAAGTCTTGCGGAC
AGTATTAGTCAGGCGGTAGCAACAATCCGTCGCAACATCATTGTGCCGTTGATATATCATGTGGAAAGCTATACC
ACCCCTACAGGATCTCTGTCTCCCAATCAAGTTCCCTTGAGATGTACCGATGAAACGTACCTAAACCTCGTCCGC
CATGGCTTGCGACTCTCCACCGGTTTCCTCACAGTTGACCTCACCCGGGATGACAATATCATTTCCCAGATCATC
TCCTCAAGTGGACGAACCAGGATCATTGGCCACTTCGAAGCCTTCCATCCTCTGCCCGGGGGTTGGGATGGCGAT
GAGTATATGGAAGTTTATGAGCGGGCTAAAAGCCTAGGATGCGACATAGTCCGACTATGCCAACCGGCTGAGACA
CCCGAAGACAACCTCGCGGTGCAAAGATTTCGCCATCGCATCCAAAGCCTGCCAGTTGCTGGCATTTCGCTGATC
GCCTATAACACCGGTCCTCTTGGCCGCATGTCTCGTTGCTTCAATCCTATTCTCTCCCCAGTCACACATCCGTCC
TTGGTAACGGAACTTCCAACTCACCTACGATCGTATATCACAGCCCGCGAAGTGCAGAAGGCGCTCTATAGCTCA
TTTGCCTTGGACCCGATGCAATTCTTCGTCTTTGGCGCCAACACCACATACAGTATGTCGCCCGCGATGCACAAC
ACGGCTTTCAAAATCTGCGGTTTGCCGCACAATTACTCCATTCACCAATCACCTACTCTACGGGGATTAAATGAA
CTTGTGGAAAATCAATACTTCGGAGGATCGAGTGTCAGTCTTCCATACAAAACAGAGTGTATCCCTCTCCTCCAC
TCAATGTCTGCGCATGCACGAGCTATCGGTGCCGTCAATACCCTCATCCCCATCCGCAACCTTGATGACCTGGAC
GACAACCGTCTTCAAGAATCTTCAGTCTTTCTCCAAAAGAGCCGTGCCGGCCCTATCAAGGGACTTCACGGTGAT
AACACCGATTGGATTGGTATCTGCAATTGCATTCGCCGCGGTCTGTCTCCGGCAAATGCGATACGCTCATCATCG
ACAGGTCTTGTCATCGGATCTGGTGGAATGGCCCGTGCTGCAATTTACTCCATGATCCATCTTGGTGTGCAAAAT
ATCTTTGTCTACAACCGTACGATCGCCAATGCGGAAAGACTGGCCCACCACTACAACCGGCAAGATCTACACTCA
AAAGAAGCCAGCGGGTCTGGCCGTCCCACAGTTCGCATTATTGCTTCATTATCCGACCCCTGGCCTGCCGATTTC
AAACAGCCGACGATCGTTGTCTCAGGAATTCCGGCTCATAGCATTGGCGGCGAGCTAGCACCTAATTTCCATATG
CCAGCACAATGGCTAGAGAGCCCGACAGGTGGCGTTGTTGTTGACGTAAGTTTCCTTTTTACTCTTGTACCAACC
CAAAATAATGGTGTTTTATTCCTAACCAATGATTTTAGCTCGCATACAAGCCCCTCAATACCCCTCTCATGAAAC
AAACACGAGCCCTATCCCATCGCGGTTGGGTAGCCCTGGATGGCCTTGATGTTCTGCCAGAACAAGGCTTCGCTC
AGTTTGAACTGTTCACTGGCCGCCGCGCTCCTAGGCGCGTTATGCGGAGCATTGTGCTTCAAGAGTACAAAGACG
ATGAAGGGAATAATGATCATGAAGCGATACGAGACAGGTTACAGCAAATGGATGGACAGCCGACTTGA

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