Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g781.t1
Gene name
Location	scaffold_01:2091351..2094093
Strand	-
Gene length (bp)	2742
Transcript length (bp)	2742
Coding sequence length (bp)	2742
Protein length (aa)	914

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00270	DEAD	DEAD/DEAH box helicase	7.8E-47	109	274
PF00271	Helicase_C	Helicase conserved C-terminal domain	2.0E-23	361	460
PF08147	DBP10CT	DBP10CT (NUC160) domain	4.5E-21	745	809

GO

GO Term	Description	Terminal node
GO:0003724	RNA helicase activity	Yes
GO:0005634	nucleus	Yes
GO:0005524	ATP binding	Yes
GO:0003676	nucleic acid binding	Yes
GO:0003723	RNA binding	Yes
GO:0097367	carbohydrate derivative binding	No
GO:0004386	helicase activity	No
GO:0000166	nucleotide binding	No
GO:0030554	adenyl nucleotide binding	No
GO:0005575	cellular_component	No
GO:0043227	membrane-bounded organelle	No
GO:0017076	purine nucleotide binding	No
GO:0140657	ATP-dependent activity	No
GO:0043167	ion binding	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0008186	ATP-dependent activity, acting on RNA	No
GO:0032553	ribonucleotide binding	No
GO:0005488	binding	No
GO:0003824	catalytic activity	No
GO:0036094	small molecule binding	No
GO:0043229	intracellular organelle	No
GO:0003674	molecular_function	No
GO:0043231	intracellular membrane-bounded organelle	No
GO:0097159	organic cyclic compound binding	No
GO:0032555	purine ribonucleotide binding	No
GO:0140098	catalytic activity, acting on RNA	No
GO:0110165	cellular anatomical entity	No
GO:1901363	heterocyclic compound binding	No
GO:0043168	anion binding	No
GO:0043226	organelle	No
GO:0140640	catalytic activity, acting on a nucleic acid	No
GO:1901265	nucleoside phosphate binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 45	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g781.t1 MAPRAASPAESEVEFDITKSLFEHDSDSDDGAKPPPKKKPQKPDTHQDLDFLNEDDGDAAFIANSQASANRKGAN LKGRTVKKGGGFQAMGLSMSLLKAITRKGFSVPTPIQRKTIPMIMDDKDVVGMARTGSGKTASFVIPMIEKLKSH STSFGARALIMSPSRELALQTMKVVKEMGKGTNLTSVLLIGGDSLEDQFGMMANNPDIIIATPGRFLHLKVEMDM DLSSIKYVVFDEADRLFEMGFAAQLTEILHGLPTNRQTLLFSATLPKSLVEFARAGLQEPSLIRLDIENKVSPDL QNAFFAVKSADKEGALLHILHNIIKMPTGETYIGGRLRQEAENPTRKRKRSDVRLPSGFKESPTEHSTIVFAATK HHVDYLYSLLTEAGFATSYAYGSLDQTARNHHVQNFRSGISNILVVTDVAARGIDIPVLANVINYDFPSQPKIFI HRVGRTARAGQKGWSYSLVRDKDAPYLLDLQLFLGRRLVLGRQYGTEVNFAEDVVVGTLPREAISRTCEWVQKVL DDDIDIYGQKGVSQKGEKLYLRTRNSASAESAKRAKDVVSSDHWAEIHPLFNDATTEREVERESMLARIGGYRPH ETIFEANNRRGGKVADNEAVDTIRRLRTSVENKRKRADAKAEAELAALGMPTPGPDGQVEDEDIPEHAGENMSDA SDDDLEVTFSAYNSKSKQGEKKDAAAAFQNPDYFMGYTPQHNDMAEDKAYGVHSGTNSNFASDSRNATMDLNGDE GKRGFGEARSIMRWDKRHKKYVARQNDEDGSKGSRLVRGESGAKIAASFRSGRFQAWKKGKRVDRMPRVGEAETP NMNNVNSRMSSGRFRHSQDRAPKRADPLRGDYDKMKKKNDAARERQHDKLGGAAYGGKSELRSTEDIRKARKQVQ QRRDKNARPSKRR*
Coding	>Pro_DTO377G3_2\|g781.t1 ATGGCTCCCCGTGCTGCCTCACCCGCAGAATCGGAGGTCGAGTTCGACATCACAAAATCCCTTTTTGAACATGAC AGCGATTCCGATGACGGCGCAAAGCCACCCCCCAAGAAAAAGCCCCAGAAGCCCGATACCCACCAAGATCTTGAC TTTTTAAACGAAGACGACGGCGATGCGGCTTTCATTGCGAACTCGCAGGCGTCCGCCAACCGAAAGGGCGCAAAT CTCAAGGGCCGTACGGTGAAGAAGGGTGGTGGTTTCCAGGCAATGGGTCTCAGCATGAGTCTGCTGAAAGCGATC ACCCGCAAAGGATTTTCCGTGCCTACCCCGATTCAGCGAAAGACTATTCCCATGATCATGGACGACAAGGATGTG GTTGGTATGGCTCGAACTGGTTCCGGAAAGACTGCCTCGTTTGTTATTCCTATGATTGAGAAGTTGAAGAGCCAT AGCACCTCGTTCGGTGCACGTGCTCTTATCATGTCCCCATCCCGTGAATTGGCTCTACAAACCATGAAGGTCGTT AAGGAGATGGGCAAGGGAACAAATTTGACATCGGTGCTTCTCATTGGTGGTGACAGTCTGGAAGATCAGTTCGGC ATGATGGCCAACAACCCCGATATCATCATCGCAACACCCGGTCGATTCCTGCACTTGAAGGTCGAAATGGACATG GATCTTTCTAGCATCAAGTATGTTGTCTTCGATGAAGCCGACAGACTGTTCGAAATGGGTTTCGCCGCACAGTTG ACCGAGATTTTGCACGGCCTGCCCACGAACCGCCAGACTCTTCTCTTTTCCGCTACATTGCCCAAGTCGCTTGTC GAATTTGCTCGTGCTGGTCTCCAAGAGCCAAGTCTAATTCGTCTGGACATCGAGAACAAAGTTTCTCCGGATCTA CAAAATGCCTTCTTTGCTGTGAAGTCGGCAGATAAAGAAGGTGCCCTACTACATATTTTGCATAACATTATCAAG ATGCCTACCGGTGAGACATATATTGGCGGGAGATTACGCCAAGAAGCCGAGAACCCGACAAGGAAGCGCAAGAGA TCGGATGTCCGTCTCCCGAGCGGCTTCAAGGAGTCACCTACCGAGCACTCAACTATTGTGTTCGCTGCAACCAAG CATCACGTCGACTACCTCTACTCTCTTCTCACCGAGGCAGGGTTTGCCACCTCTTACGCCTACGGTTCCCTGGAT CAGACTGCTCGTAATCACCATGTTCAAAACTTCCGATCCGGAATCTCAAATATCCTAGTCGTCACCGATGTGGCC GCCAGAGGTATTGATATTCCTGTTCTTGCCAACGTCATCAACTACGATTTCCCCTCACAGCCCAAGATCTTCATT CACCGTGTCGGTCGTACGGCTCGTGCAGGCCAAAAGGGTTGGAGTTACAGTCTTGTTCGCGACAAAGATGCCCCG TATCTTCTGGATCTTCAGCTGTTCTTGGGACGCAGGTTGGTCCTCGGTCGTCAGTATGGCACTGAAGTCAACTTT GCAGAGGATGTTGTCGTGGGAACGCTGCCGAGAGAGGCAATCTCTCGCACTTGCGAATGGGTACAGAAGGTGCTC GACGATGATATAGATATTTACGGACAAAAGGGAGTGTCTCAAAAGGGAGAGAAGCTATATCTGCGCACCCGCAAC TCGGCTTCTGCCGAGAGTGCCAAACGGGCCAAGGATGTTGTGTCTTCTGATCACTGGGCTGAGATTCACCCGCTC TTCAATGATGCAACCACTGAGAGGGAAGTAGAGCGAGAGAGTATGCTGGCCCGCATTGGTGGTTACCGCCCACAT GAAACGATTTTCGAGGCGAACAACCGACGAGGCGGCAAAGTGGCTGACAACGAGGCCGTTGACACCATTCGCCGA CTCCGCACTAGTGTCGAGAACAAGAGAAAGCGAGCGGATGCCAAAGCAGAGGCCGAGTTGGCAGCGCTTGGAATG CCCACTCCCGGCCCGGATGGTCAAGTGGAGGACGAGGACATCCCCGAGCATGCCGGCGAGAACATGTCAGACGCA TCCGACGATGACCTCGAAGTCACTTTCTCTGCGTACAACTCCAAGTCCAAGCAAGGCGAGAAAAAAGACGCAGCA GCAGCATTCCAGAACCCGGATTATTTCATGGGCTACACACCTCAGCACAACGACATGGCCGAAGATAAGGCTTAC GGTGTGCACTCGGGTACCAACTCGAACTTTGCCAGCGACTCCCGCAACGCGACTATGGACCTCAACGGCGACGAA GGCAAGCGCGGGTTCGGCGAAGCGCGTTCCATCATGCGCTGGGACAAGCGACACAAGAAGTACGTTGCCCGCCAG AACGACGAGGACGGTTCCAAGGGCAGCCGACTCGTGCGCGGCGAGAGTGGAGCCAAGATCGCCGCCAGTTTCCGC AGCGGTCGCTTCCAGGCCTGGAAGAAGGGCAAGCGCGTTGATCGGATGCCTCGTGTTGGCGAGGCCGAGACGCCT AATATGAACAACGTCAACTCGCGCATGAGCAGTGGCCGATTCCGACACAGCCAGGACCGGGCGCCTAAGCGGGCC GATCCTCTGCGTGGCGACTACGACAAGATGAAGAAGAAGAACGACGCGGCGCGCGAACGCCAGCACGATAAGCTT GGTGGAGCGGCATACGGCGGAAAGAGCGAACTTCGGTCTACGGAGGATATTCGCAAGGCGCGGAAGCAGGTGCAA CAGCGTCGCGATAAGAATGCCCGGCCGTCGAAGAGACGCTAG
Transcript	>Pro_DTO377G3_2\|g781.t1 ATGGCTCCCCGTGCTGCCTCACCCGCAGAATCGGAGGTCGAGTTCGACATCACAAAATCCCTTTTTGAACATGAC AGCGATTCCGATGACGGCGCAAAGCCACCCCCCAAGAAAAAGCCCCAGAAGCCCGATACCCACCAAGATCTTGAC TTTTTAAACGAAGACGACGGCGATGCGGCTTTCATTGCGAACTCGCAGGCGTCCGCCAACCGAAAGGGCGCAAAT CTCAAGGGCCGTACGGTGAAGAAGGGTGGTGGTTTCCAGGCAATGGGTCTCAGCATGAGTCTGCTGAAAGCGATC ACCCGCAAAGGATTTTCCGTGCCTACCCCGATTCAGCGAAAGACTATTCCCATGATCATGGACGACAAGGATGTG GTTGGTATGGCTCGAACTGGTTCCGGAAAGACTGCCTCGTTTGTTATTCCTATGATTGAGAAGTTGAAGAGCCAT AGCACCTCGTTCGGTGCACGTGCTCTTATCATGTCCCCATCCCGTGAATTGGCTCTACAAACCATGAAGGTCGTT AAGGAGATGGGCAAGGGAACAAATTTGACATCGGTGCTTCTCATTGGTGGTGACAGTCTGGAAGATCAGTTCGGC ATGATGGCCAACAACCCCGATATCATCATCGCAACACCCGGTCGATTCCTGCACTTGAAGGTCGAAATGGACATG GATCTTTCTAGCATCAAGTATGTTGTCTTCGATGAAGCCGACAGACTGTTCGAAATGGGTTTCGCCGCACAGTTG ACCGAGATTTTGCACGGCCTGCCCACGAACCGCCAGACTCTTCTCTTTTCCGCTACATTGCCCAAGTCGCTTGTC GAATTTGCTCGTGCTGGTCTCCAAGAGCCAAGTCTAATTCGTCTGGACATCGAGAACAAAGTTTCTCCGGATCTA CAAAATGCCTTCTTTGCTGTGAAGTCGGCAGATAAAGAAGGTGCCCTACTACATATTTTGCATAACATTATCAAG ATGCCTACCGGTGAGACATATATTGGCGGGAGATTACGCCAAGAAGCCGAGAACCCGACAAGGAAGCGCAAGAGA TCGGATGTCCGTCTCCCGAGCGGCTTCAAGGAGTCACCTACCGAGCACTCAACTATTGTGTTCGCTGCAACCAAG CATCACGTCGACTACCTCTACTCTCTTCTCACCGAGGCAGGGTTTGCCACCTCTTACGCCTACGGTTCCCTGGAT CAGACTGCTCGTAATCACCATGTTCAAAACTTCCGATCCGGAATCTCAAATATCCTAGTCGTCACCGATGTGGCC GCCAGAGGTATTGATATTCCTGTTCTTGCCAACGTCATCAACTACGATTTCCCCTCACAGCCCAAGATCTTCATT CACCGTGTCGGTCGTACGGCTCGTGCAGGCCAAAAGGGTTGGAGTTACAGTCTTGTTCGCGACAAAGATGCCCCG TATCTTCTGGATCTTCAGCTGTTCTTGGGACGCAGGTTGGTCCTCGGTCGTCAGTATGGCACTGAAGTCAACTTT GCAGAGGATGTTGTCGTGGGAACGCTGCCGAGAGAGGCAATCTCTCGCACTTGCGAATGGGTACAGAAGGTGCTC GACGATGATATAGATATTTACGGACAAAAGGGAGTGTCTCAAAAGGGAGAGAAGCTATATCTGCGCACCCGCAAC TCGGCTTCTGCCGAGAGTGCCAAACGGGCCAAGGATGTTGTGTCTTCTGATCACTGGGCTGAGATTCACCCGCTC TTCAATGATGCAACCACTGAGAGGGAAGTAGAGCGAGAGAGTATGCTGGCCCGCATTGGTGGTTACCGCCCACAT GAAACGATTTTCGAGGCGAACAACCGACGAGGCGGCAAAGTGGCTGACAACGAGGCCGTTGACACCATTCGCCGA CTCCGCACTAGTGTCGAGAACAAGAGAAAGCGAGCGGATGCCAAAGCAGAGGCCGAGTTGGCAGCGCTTGGAATG CCCACTCCCGGCCCGGATGGTCAAGTGGAGGACGAGGACATCCCCGAGCATGCCGGCGAGAACATGTCAGACGCA TCCGACGATGACCTCGAAGTCACTTTCTCTGCGTACAACTCCAAGTCCAAGCAAGGCGAGAAAAAAGACGCAGCA GCAGCATTCCAGAACCCGGATTATTTCATGGGCTACACACCTCAGCACAACGACATGGCCGAAGATAAGGCTTAC GGTGTGCACTCGGGTACCAACTCGAACTTTGCCAGCGACTCCCGCAACGCGACTATGGACCTCAACGGCGACGAA GGCAAGCGCGGGTTCGGCGAAGCGCGTTCCATCATGCGCTGGGACAAGCGACACAAGAAGTACGTTGCCCGCCAG AACGACGAGGACGGTTCCAAGGGCAGCCGACTCGTGCGCGGCGAGAGTGGAGCCAAGATCGCCGCCAGTTTCCGC AGCGGTCGCTTCCAGGCCTGGAAGAAGGGCAAGCGCGTTGATCGGATGCCTCGTGTTGGCGAGGCCGAGACGCCT AATATGAACAACGTCAACTCGCGCATGAGCAGTGGCCGATTCCGACACAGCCAGGACCGGGCGCCTAAGCGGGCC GATCCTCTGCGTGGCGACTACGACAAGATGAAGAAGAAGAACGACGCGGCGCGCGAACGCCAGCACGATAAGCTT GGTGGAGCGGCATACGGCGGAAAGAGCGAACTTCGGTCTACGGAGGATATTCGCAAGGCGCGGAAGCAGGTGCAA CAGCGTCGCGATAAGAATGCCCGGCCGTCGAAGAGACGCTAG
Gene	>Pro_DTO377G3_2\|g781.t1 ATGGCTCCCCGTGCTGCCTCACCCGCAGAATCGGAGGTCGAGTTCGACATCACAAAATCCCTTTTTGAACATGAC AGCGATTCCGATGACGGCGCAAAGCCACCCCCCAAGAAAAAGCCCCAGAAGCCCGATACCCACCAAGATCTTGAC TTTTTAAACGAAGACGACGGCGATGCGGCTTTCATTGCGAACTCGCAGGCGTCCGCCAACCGAAAGGGCGCAAAT CTCAAGGGCCGTACGGTGAAGAAGGGTGGTGGTTTCCAGGCAATGGGTCTCAGCATGAGTCTGCTGAAAGCGATC ACCCGCAAAGGATTTTCCGTGCCTACCCCGATTCAGCGAAAGACTATTCCCATGATCATGGACGACAAGGATGTG GTTGGTATGGCTCGAACTGGTTCCGGAAAGACTGCCTCGTTTGTTATTCCTATGATTGAGAAGTTGAAGAGCCAT AGCACCTCGTTCGGTGCACGTGCTCTTATCATGTCCCCATCCCGTGAATTGGCTCTACAAACCATGAAGGTCGTT AAGGAGATGGGCAAGGGAACAAATTTGACATCGGTGCTTCTCATTGGTGGTGACAGTCTGGAAGATCAGTTCGGC ATGATGGCCAACAACCCCGATATCATCATCGCAACACCCGGTCGATTCCTGCACTTGAAGGTCGAAATGGACATG GATCTTTCTAGCATCAAGTATGTTGTCTTCGATGAAGCCGACAGACTGTTCGAAATGGGTTTCGCCGCACAGTTG ACCGAGATTTTGCACGGCCTGCCCACGAACCGCCAGACTCTTCTCTTTTCCGCTACATTGCCCAAGTCGCTTGTC GAATTTGCTCGTGCTGGTCTCCAAGAGCCAAGTCTAATTCGTCTGGACATCGAGAACAAAGTTTCTCCGGATCTA CAAAATGCCTTCTTTGCTGTGAAGTCGGCAGATAAAGAAGGTGCCCTACTACATATTTTGCATAACATTATCAAG ATGCCTACCGGTGAGACATATATTGGCGGGAGATTACGCCAAGAAGCCGAGAACCCGACAAGGAAGCGCAAGAGA TCGGATGTCCGTCTCCCGAGCGGCTTCAAGGAGTCACCTACCGAGCACTCAACTATTGTGTTCGCTGCAACCAAG CATCACGTCGACTACCTCTACTCTCTTCTCACCGAGGCAGGGTTTGCCACCTCTTACGCCTACGGTTCCCTGGAT CAGACTGCTCGTAATCACCATGTTCAAAACTTCCGATCCGGAATCTCAAATATCCTAGTCGTCACCGATGTGGCC GCCAGAGGTATTGATATTCCTGTTCTTGCCAACGTCATCAACTACGATTTCCCCTCACAGCCCAAGATCTTCATT CACCGTGTCGGTCGTACGGCTCGTGCAGGCCAAAAGGGTTGGAGTTACAGTCTTGTTCGCGACAAAGATGCCCCG TATCTTCTGGATCTTCAGCTGTTCTTGGGACGCAGGTTGGTCCTCGGTCGTCAGTATGGCACTGAAGTCAACTTT GCAGAGGATGTTGTCGTGGGAACGCTGCCGAGAGAGGCAATCTCTCGCACTTGCGAATGGGTACAGAAGGTGCTC GACGATGATATAGATATTTACGGACAAAAGGGAGTGTCTCAAAAGGGAGAGAAGCTATATCTGCGCACCCGCAAC TCGGCTTCTGCCGAGAGTGCCAAACGGGCCAAGGATGTTGTGTCTTCTGATCACTGGGCTGAGATTCACCCGCTC TTCAATGATGCAACCACTGAGAGGGAAGTAGAGCGAGAGAGTATGCTGGCCCGCATTGGTGGTTACCGCCCACAT GAAACGATTTTCGAGGCGAACAACCGACGAGGCGGCAAAGTGGCTGACAACGAGGCCGTTGACACCATTCGCCGA CTCCGCACTAGTGTCGAGAACAAGAGAAAGCGAGCGGATGCCAAAGCAGAGGCCGAGTTGGCAGCGCTTGGAATG CCCACTCCCGGCCCGGATGGTCAAGTGGAGGACGAGGACATCCCCGAGCATGCCGGCGAGAACATGTCAGACGCA TCCGACGATGACCTCGAAGTCACTTTCTCTGCGTACAACTCCAAGTCCAAGCAAGGCGAGAAAAAAGACGCAGCA GCAGCATTCCAGAACCCGGATTATTTCATGGGCTACACACCTCAGCACAACGACATGGCCGAAGATAAGGCTTAC GGTGTGCACTCGGGTACCAACTCGAACTTTGCCAGCGACTCCCGCAACGCGACTATGGACCTCAACGGCGACGAA GGCAAGCGCGGGTTCGGCGAAGCGCGTTCCATCATGCGCTGGGACAAGCGACACAAGAAGTACGTTGCCCGCCAG AACGACGAGGACGGTTCCAAGGGCAGCCGACTCGTGCGCGGCGAGAGTGGAGCCAAGATCGCCGCCAGTTTCCGC AGCGGTCGCTTCCAGGCCTGGAAGAAGGGCAAGCGCGTTGATCGGATGCCTCGTGTTGGCGAGGCCGAGACGCCT AATATGAACAACGTCAACTCGCGCATGAGCAGTGGCCGATTCCGACACAGCCAGGACCGGGCGCCTAAGCGGGCC GATCCTCTGCGTGGCGACTACGACAAGATGAAGAAGAAGAACGACGCGGCGCGCGAACGCCAGCACGATAAGCTT GGTGGAGCGGCATACGGCGGAAAGAGCGAACTTCGGTCTACGGAGGATATTCGCAAGGCGCGGAAGCAGGTGCAA CAGCGTCGCGATAAGAATGCCCGGCCGTCGAAGAGACGCTAG

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences