Protein ID | Pro_DTO377G3_2|g7803.t1 |
Gene name | |
Location | scaffold_26:129985..132902 |
Strand | - |
Gene length (bp) | 2917 |
Transcript length (bp) | 2868 |
Coding sequence length (bp) | 2868 |
Protein length (aa) | 956 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02714 | RSN1_7TM | Calcium-dependent channel, 7TM region, putative phosphate | 3.4E-78 | 387 | 670 |
PF13967 | RSN1_TM | Late exocytosis, associated with Golgi transport | 3.4E-43 | 34 | 187 |
PF14703 | PHM7_cyt | Cytosolic domain of 10TM putative phosphate transporter | 5.8E-40 | 210 | 376 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 67 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 34 | 56 | 22 |
2 | 120 | 137 | 17 |
3 | 163 | 185 | 22 |
4 | 391 | 413 | 22 |
5 | 438 | 460 | 22 |
6 | 480 | 502 | 22 |
7 | 551 | 573 | 22 |
8 | 594 | 616 | 22 |
9 | 620 | 639 | 19 |
10 | 651 | 670 | 19 |
11 | 675 | 697 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 19.66 | 11.26 | 28.06 |
5d_25C | Five days - 25 degrees Celsius | 10.74 | 5.42 | 16.06 |
7d_25C | Seven days - 25 degrees Celsius | 11.10 | 5.54 | 16.67 |
10d_25C | Ten days - 25 degrees Celsius | 11.26 | 5.87 | 16.66 |
7d_15C | Seven days - 15 degrees Celsius | 9.60 | 4.07 | 15.13 |
7d_30C | Seven days - 30 degrees Celsius | 18.57 | 10.25 | 26.89 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.012303 | yes |
3d_25C | 7d_25C | 0.026342 | yes |
3d_25C | 7d_15C | 0.010411 | yes |
3d_25C | 7d_30C | 0.873736 | no |
3d_25C | 10d_25C | 0.017204 | yes |
5d_25C | 7d_25C | 0.939347 | no |
5d_25C | 7d_15C | 0.781054 | no |
5d_25C | 7d_30C | 0.024657 | yes |
5d_25C | 10d_25C | 0.908164 | no |
7d_25C | 7d_15C | 0.711408 | no |
7d_25C | 7d_30C | 0.046354 | yes |
7d_25C | 10d_25C | 0.973931 | no |
7d_15C | 7d_30C | 0.019886 | yes |
7d_15C | 10d_25C | 0.662033 | no |
7d_30C | 10d_25C | 0.043772 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g7803.t1 MDLQQLGLHARTDGTDTFLELIANPFRSAFTVTAIWASLGTSIGVTVLLALLFSLVRPRHSLVYAPKVKHADLKH TPPPVGKGFFAWVKPVINTREPQLIESVGLDAAIFLRFTKMCRNIFIFLSIIGCLVMIPVNITQSKNSTDSTASA AFNMMTPLNITNPMAIWSQVVCAWAFDLIVAFFLWRNYRAVRNLRRTYFQSAEYQRSLHARTLMITDIPVNSRTD EGILRLTDKVNPTSALPRAAIGRNVRDLPRLIKEHEEVVRELESVLAKYLKNPDRLPAKRPTLHPPRRQRKQFPG GKVDAIDYLSVRIRVLEEEIKHGRASIDRRNAMPYGFASWDNIEHAHAVAWNARRKRPEGTTIALAPRPSDIIWE NLPLSKSARKWKRLINFIWVTGLTLVWIVPNGLIAIFLSNLSNLGLVWPAFQTSLAMNPNVWAAVQGIASPALTS LVYLALPVIFRRLSIQGGSKTKTSRERHVLGHLYAFFVFNNLIVFSLFSAAWYFVSFVVDKTKNHEDAWQAILES RMYAKLVSALCTVSPFWVTYLLQRNLGAAIDLVQFVTMAWVWFAKTFLSPTPRQAIEWTAPPSFDYASYYNYFLF YATVAFCFATLQPIVLPVTALYFGVDAMLKKYLLMYVFVTKNESGGAFWRVLFNRMIFATILANVIIALVAKSSG TWNMVFCVIPLPFLMIGFKIYCMKTFDSDCEFVNRANLSDAEALGVNTSDKKASDRLNTKFGHPALYKPLLTPMV HAKAAAALKEIYQGRLDQGDMGGEYSDIAMNPMLASQPGKSAEPAPFEVVPENHLDFSYYKDRADFRDEFGGGIY GRPDDLMTERSHTPRSTLRGEWSPGSSRASSPAPSLPSMPLNMHKGYEHEHSDPTGLIHPAFRVPLSRGNSGRSA ANADESESGLLSNAQAPGQTDITNPLGRWRTGGYGPVDQEDEPSYTSYDAYRSHG* |
Coding | >Pro_DTO377G3_2|g7803.t1 ATGGATCTACAACAATTGGGCTTGCATGCCCGCACGGATGGGACAGATACCTTCCTTGAGCTCATTGCAAATCCA TTTCGGTCTGCATTTACAGTCACTGCTATTTGGGCCTCGCTAGGCACCTCGATCGGCGTCACCGTCCTCCTCGCT CTCCTCTTCTCCCTAGTTCGACCCCGTCACTCGCTTGTCTATGCGCCCAAAGTCAAGCATGCAGACCTCAAACAC ACCCCGCCGCCGGTGGGCAAGGGCTTCTTCGCCTGGGTCAAGCCGGTGATCAATACACGGGAACCGCAGCTGATC GAGTCAGTCGGGCTGGACGCCGCAATCTTCCTCCGCTTTACAAAAATGTGCCGCAACATCTTCATCTTTCTCAGT ATAATCGGCTGCCTCGTCATGATACCGGTCAATATTACACAGAGCAAGAATTCTACTGACTCGACGGCGTCTGCC GCCTTCAACATGATGACGCCCCTCAACATCACCAACCCCATGGCCATTTGGAGTCAAGTGGTATGCGCCTGGGCT TTTGATCTTATTGTTGCTTTCTTCTTATGGAGGAACTATCGCGCTGTGCGGAACCTGCGGAGGACATATTTCCAA AGCGCTGAATACCAGCGCAGTCTGCATGCCAGAACCTTGATGATCACGGACATCCCTGTCAATAGTCGTACCGAT GAAGGTATTCTGCGGCTAACCGACAAGGTCAATCCCACCTCGGCCCTCCCACGAGCTGCTATTGGCCGCAATGTC AGGGATTTGCCTCGCCTCATCAAGGAACATGAAGAGGTTGTCCGAGAACTCGAGTCCGTTTTGGCCAAGTATCTT AAGAACCCGGACCGATTGCCAGCGAAACGACCGACCCTACATCCCCCTCGCCGACAACGCAAACAATTCCCCGGC GGCAAAGTGGACGCGATAGATTATCTATCCGTGCGGATTCGCGTCTTGGAAGAGGAAATCAAGCATGGCCGGGCA TCGATTGATCGCCGAAACGCGATGCCGTACGGCTTTGCCAGCTGGGACAATATCGAGCACGCGCATGCTGTGGCA TGGAACGCTCGCCGCAAACGCCCTGAGGGCACTACTATTGCTCTTGCGCCGCGGCCCAGCGATATCATATGGGAA AACCTTCCGCTTTCAAAATCCGCGCGCAAGTGGAAGCGACTGATCAATTTTATCTGGGTGACAGGCTTGACACTG GTGTGGATTGTTCCTAACGGTTTGATTGCCATTTTCTTGTCCAATCTGTCCAATCTGGGCTTGGTATGGCCGGCG TTCCAGACTTCGCTGGCAATGAACCCAAACGTTTGGGCTGCTGTCCAGGGTATTGCATCGCCCGCACTAACTTCG CTCGTGTATCTGGCGCTTCCGGTGATCTTCCGTCGACTTTCTATCCAAGGTGGTAGCAAGACTAAAACATCTCGA GAGCGCCACGTGCTGGGGCATCTGTATGCATTCTTCGTTTTCAACAATCTGATCGTCTTCTCACTTTTCTCGGCT GCTTGGTACTTCGTGTCGTTCGTGGTTGACAAAACCAAAAACCACGAAGACGCTTGGCAAGCCATCTTGGAAAGC CGGATGTATGCCAAATTGGTAAGCGCTCTCTGCACCGTGTCACCGTTCTGGGTGACGTATCTTTTGCAGCGTAAT CTCGGCGCTGCTATTGATCTGGTGCAGTTCGTTACCATGGCTTGGGTCTGGTTCGCCAAGACGTTCCTCTCACCC ACACCCCGACAGGCAATTGAGTGGACCGCACCGCCATCATTCGACTACGCCAGTTACTACAACTACTTCCTCTTC TATGCCACCGTGGCTTTCTGTTTCGCTACCTTGCAACCCATCGTACTGCCGGTGACAGCATTGTATTTTGGTGTG GATGCCATGTTGAAGAAGTATCTATTGATGTACGTGTTCGTGACTAAGAATGAGTCTGGTGGTGCGTTTTGGCGT GTGTTATTCAATCGCATGATCTTCGCTACTATTCTTGCGAACGTGATCATCGCTCTCGTGGCCAAATCGAGCGGC ACGTGGAACATGGTGTTCTGCGTGATTCCCCTGCCTTTCTTGATGATTGGATTCAAGATCTATTGCATGAAGACG TTTGACTCCGATTGCGAGTTTGTAAACCGTGCAAATCTAAGCGATGCCGAGGCCTTAGGTGTGAACACCTCAGAC AAGAAAGCGTCAGACCGTCTGAATACCAAGTTCGGACACCCTGCCCTGTACAAACCACTTTTGACACCCATGGTG CACGCCAAGGCAGCCGCAGCACTAAAAGAAATCTACCAAGGTCGTCTGGACCAGGGTGACATGGGCGGCGAGTAC TCAGACATTGCAATGAACCCGATGCTGGCCTCCCAGCCCGGCAAGTCTGCCGAACCCGCGCCCTTCGAGGTCGTC CCGGAGAACCATCTAGACTTCTCCTACTACAAGGATCGAGCAGACTTCCGAGACGAGTTCGGAGGCGGCATCTAC GGCCGGCCTGATGACCTGATGACAGAGCGGTCACATACACCCCGCAGTACTTTGCGAGGCGAGTGGTCTCCCGGC TCATCTCGTGCCTCATCACCCGCACCCTCTCTGCCATCAATGCCGCTGAACATGCACAAGGGTTACGAACACGAA CACTCCGACCCGACCGGGCTTATCCACCCGGCCTTCCGTGTGCCGCTATCGCGGGGCAACAGTGGCAGGTCGGCT GCAAACGCAGACGAGTCGGAGTCCGGACTCCTCAGCAATGCACAGGCTCCTGGGCAGACGGATATCACGAATCCG CTCGGTCGCTGGAGGACCGGTGGTTATGGACCAGTCGACCAGGAAGACGAGCCCTCGTATACTTCTTACGACGCT TACCGTTCACATGGGTAA |
Transcript | >Pro_DTO377G3_2|g7803.t1 ATGGATCTACAACAATTGGGCTTGCATGCCCGCACGGATGGGACAGATACCTTCCTTGAGCTCATTGCAAATCCA TTTCGGTCTGCATTTACAGTCACTGCTATTTGGGCCTCGCTAGGCACCTCGATCGGCGTCACCGTCCTCCTCGCT CTCCTCTTCTCCCTAGTTCGACCCCGTCACTCGCTTGTCTATGCGCCCAAAGTCAAGCATGCAGACCTCAAACAC ACCCCGCCGCCGGTGGGCAAGGGCTTCTTCGCCTGGGTCAAGCCGGTGATCAATACACGGGAACCGCAGCTGATC GAGTCAGTCGGGCTGGACGCCGCAATCTTCCTCCGCTTTACAAAAATGTGCCGCAACATCTTCATCTTTCTCAGT ATAATCGGCTGCCTCGTCATGATACCGGTCAATATTACACAGAGCAAGAATTCTACTGACTCGACGGCGTCTGCC GCCTTCAACATGATGACGCCCCTCAACATCACCAACCCCATGGCCATTTGGAGTCAAGTGGTATGCGCCTGGGCT TTTGATCTTATTGTTGCTTTCTTCTTATGGAGGAACTATCGCGCTGTGCGGAACCTGCGGAGGACATATTTCCAA AGCGCTGAATACCAGCGCAGTCTGCATGCCAGAACCTTGATGATCACGGACATCCCTGTCAATAGTCGTACCGAT GAAGGTATTCTGCGGCTAACCGACAAGGTCAATCCCACCTCGGCCCTCCCACGAGCTGCTATTGGCCGCAATGTC AGGGATTTGCCTCGCCTCATCAAGGAACATGAAGAGGTTGTCCGAGAACTCGAGTCCGTTTTGGCCAAGTATCTT AAGAACCCGGACCGATTGCCAGCGAAACGACCGACCCTACATCCCCCTCGCCGACAACGCAAACAATTCCCCGGC GGCAAAGTGGACGCGATAGATTATCTATCCGTGCGGATTCGCGTCTTGGAAGAGGAAATCAAGCATGGCCGGGCA TCGATTGATCGCCGAAACGCGATGCCGTACGGCTTTGCCAGCTGGGACAATATCGAGCACGCGCATGCTGTGGCA TGGAACGCTCGCCGCAAACGCCCTGAGGGCACTACTATTGCTCTTGCGCCGCGGCCCAGCGATATCATATGGGAA AACCTTCCGCTTTCAAAATCCGCGCGCAAGTGGAAGCGACTGATCAATTTTATCTGGGTGACAGGCTTGACACTG GTGTGGATTGTTCCTAACGGTTTGATTGCCATTTTCTTGTCCAATCTGTCCAATCTGGGCTTGGTATGGCCGGCG TTCCAGACTTCGCTGGCAATGAACCCAAACGTTTGGGCTGCTGTCCAGGGTATTGCATCGCCCGCACTAACTTCG CTCGTGTATCTGGCGCTTCCGGTGATCTTCCGTCGACTTTCTATCCAAGGTGGTAGCAAGACTAAAACATCTCGA GAGCGCCACGTGCTGGGGCATCTGTATGCATTCTTCGTTTTCAACAATCTGATCGTCTTCTCACTTTTCTCGGCT GCTTGGTACTTCGTGTCGTTCGTGGTTGACAAAACCAAAAACCACGAAGACGCTTGGCAAGCCATCTTGGAAAGC CGGATGTATGCCAAATTGGTAAGCGCTCTCTGCACCGTGTCACCGTTCTGGGTGACGTATCTTTTGCAGCGTAAT CTCGGCGCTGCTATTGATCTGGTGCAGTTCGTTACCATGGCTTGGGTCTGGTTCGCCAAGACGTTCCTCTCACCC ACACCCCGACAGGCAATTGAGTGGACCGCACCGCCATCATTCGACTACGCCAGTTACTACAACTACTTCCTCTTC TATGCCACCGTGGCTTTCTGTTTCGCTACCTTGCAACCCATCGTACTGCCGGTGACAGCATTGTATTTTGGTGTG GATGCCATGTTGAAGAAGTATCTATTGATGTACGTGTTCGTGACTAAGAATGAGTCTGGTGGTGCGTTTTGGCGT GTGTTATTCAATCGCATGATCTTCGCTACTATTCTTGCGAACGTGATCATCGCTCTCGTGGCCAAATCGAGCGGC ACGTGGAACATGGTGTTCTGCGTGATTCCCCTGCCTTTCTTGATGATTGGATTCAAGATCTATTGCATGAAGACG TTTGACTCCGATTGCGAGTTTGTAAACCGTGCAAATCTAAGCGATGCCGAGGCCTTAGGTGTGAACACCTCAGAC AAGAAAGCGTCAGACCGTCTGAATACCAAGTTCGGACACCCTGCCCTGTACAAACCACTTTTGACACCCATGGTG CACGCCAAGGCAGCCGCAGCACTAAAAGAAATCTACCAAGGTCGTCTGGACCAGGGTGACATGGGCGGCGAGTAC TCAGACATTGCAATGAACCCGATGCTGGCCTCCCAGCCCGGCAAGTCTGCCGAACCCGCGCCCTTCGAGGTCGTC CCGGAGAACCATCTAGACTTCTCCTACTACAAGGATCGAGCAGACTTCCGAGACGAGTTCGGAGGCGGCATCTAC GGCCGGCCTGATGACCTGATGACAGAGCGGTCACATACACCCCGCAGTACTTTGCGAGGCGAGTGGTCTCCCGGC TCATCTCGTGCCTCATCACCCGCACCCTCTCTGCCATCAATGCCGCTGAACATGCACAAGGGTTACGAACACGAA CACTCCGACCCGACCGGGCTTATCCACCCGGCCTTCCGTGTGCCGCTATCGCGGGGCAACAGTGGCAGGTCGGCT GCAAACGCAGACGAGTCGGAGTCCGGACTCCTCAGCAATGCACAGGCTCCTGGGCAGACGGATATCACGAATCCG CTCGGTCGCTGGAGGACCGGTGGTTATGGACCAGTCGACCAGGAAGACGAGCCCTCGTATACTTCTTACGACGCT TACCGTTCACATGGGTAA |
Gene | >Pro_DTO377G3_2|g7803.t1 ATGGATCTACAACAATTGGGCTTGCATGCCCGCACGGATGGGACAGATACCTTCCTTGAGCTCATTGCAAATCCA TTTCGGTCTGCAGTAAGTCGAAATTGTTTGCGAGGAGGAACACCACATTGACAAGCTATAGTTTACAGTCACTGC TATTTGGGCCTCGCTAGGCACCTCGATCGGCGTCACCGTCCTCCTCGCTCTCCTCTTCTCCCTAGTTCGACCCCG TCACTCGCTTGTCTATGCGCCCAAAGTCAAGCATGCAGACCTCAAACACACCCCGCCGCCGGTGGGCAAGGGCTT CTTCGCCTGGGTCAAGCCGGTGATCAATACACGGGAACCGCAGCTGATCGAGTCAGTCGGGCTGGACGCCGCAAT CTTCCTCCGCTTTACAAAAATGTGCCGCAACATCTTCATCTTTCTCAGTATAATCGGCTGCCTCGTCATGATACC GGTCAATATTACACAGAGCAAGAATTCTACTGACTCGACGGCGTCTGCCGCCTTCAACATGATGACGCCCCTCAA CATCACCAACCCCATGGCCATTTGGAGTCAAGTGGTATGCGCCTGGGCTTTTGATCTTATTGTTGCTTTCTTCTT ATGGAGGAACTATCGCGCTGTGCGGAACCTGCGGAGGACATATTTCCAAAGCGCTGAATACCAGCGCAGTCTGCA TGCCAGAACCTTGATGATCACGGACATCCCTGTCAATAGTCGTACCGATGAAGGTATTCTGCGGCTAACCGACAA GGTCAATCCCACCTCGGCCCTCCCACGAGCTGCTATTGGCCGCAATGTCAGGGATTTGCCTCGCCTCATCAAGGA ACATGAAGAGGTTGTCCGAGAACTCGAGTCCGTTTTGGCCAAGTATCTTAAGAACCCGGACCGATTGCCAGCGAA ACGACCGACCCTACATCCCCCTCGCCGACAACGCAAACAATTCCCCGGCGGCAAAGTGGACGCGATAGATTATCT ATCCGTGCGGATTCGCGTCTTGGAAGAGGAAATCAAGCATGGCCGGGCATCGATTGATCGCCGAAACGCGATGCC GTACGGCTTTGCCAGCTGGGACAATATCGAGCACGCGCATGCTGTGGCATGGAACGCTCGCCGCAAACGCCCTGA GGGCACTACTATTGCTCTTGCGCCGCGGCCCAGCGATATCATATGGGAAAACCTTCCGCTTTCAAAATCCGCGCG CAAGTGGAAGCGACTGATCAATTTTATCTGGGTGACAGGCTTGACACTGGTGTGGATTGTTCCTAACGGTTTGAT TGCCATTTTCTTGTCCAATCTGTCCAATCTGGGCTTGGTATGGCCGGCGTTCCAGACTTCGCTGGCAATGAACCC AAACGTTTGGGCTGCTGTCCAGGGTATTGCATCGCCCGCACTAACTTCGCTCGTGTATCTGGCGCTTCCGGTGAT CTTCCGTCGACTTTCTATCCAAGGTGGTAGCAAGACTAAAACATCTCGAGAGCGCCACGTGCTGGGGCATCTGTA TGCATTCTTCGTTTTCAACAATCTGATCGTCTTCTCACTTTTCTCGGCTGCTTGGTACTTCGTGTCGTTCGTGGT TGACAAAACCAAAAACCACGAAGACGCTTGGCAAGCCATCTTGGAAAGCCGGATGTATGCCAAATTGGTAAGCGC TCTCTGCACCGTGTCACCGTTCTGGGTGACGTATCTTTTGCAGCGTAATCTCGGCGCTGCTATTGATCTGGTGCA GTTCGTTACCATGGCTTGGGTCTGGTTCGCCAAGACGTTCCTCTCACCCACACCCCGACAGGCAATTGAGTGGAC CGCACCGCCATCATTCGACTACGCCAGTTACTACAACTACTTCCTCTTCTATGCCACCGTGGCTTTCTGTTTCGC TACCTTGCAACCCATCGTACTGCCGGTGACAGCATTGTATTTTGGTGTGGATGCCATGTTGAAGAAGTATCTATT GATGTACGTGTTCGTGACTAAGAATGAGTCTGGTGGTGCGTTTTGGCGTGTGTTATTCAATCGCATGATCTTCGC TACTATTCTTGCGAACGTGATCATCGCTCTCGTGGCCAAATCGAGCGGCACGTGGAACATGGTGTTCTGCGTGAT TCCCCTGCCTTTCTTGATGATTGGATTCAAGATCTATTGCATGAAGACGTTTGACTCCGATTGCGAGTTTGTAAA CCGTGCAAATCTAAGCGATGCCGAGGCCTTAGGTGTGAACACCTCAGACAAGAAAGCGTCAGACCGTCTGAATAC CAAGTTCGGACACCCTGCCCTGTACAAACCACTTTTGACACCCATGGTGCACGCCAAGGCAGCCGCAGCACTAAA AGAAATCTACCAAGGTCGTCTGGACCAGGGTGACATGGGCGGCGAGTACTCAGACATTGCAATGAACCCGATGCT GGCCTCCCAGCCCGGCAAGTCTGCCGAACCCGCGCCCTTCGAGGTCGTCCCGGAGAACCATCTAGACTTCTCCTA CTACAAGGATCGAGCAGACTTCCGAGACGAGTTCGGAGGCGGCATCTACGGCCGGCCTGATGACCTGATGACAGA GCGGTCACATACACCCCGCAGTACTTTGCGAGGCGAGTGGTCTCCCGGCTCATCTCGTGCCTCATCACCCGCACC CTCTCTGCCATCAATGCCGCTGAACATGCACAAGGGTTACGAACACGAACACTCCGACCCGACCGGGCTTATCCA CCCGGCCTTCCGTGTGCCGCTATCGCGGGGCAACAGTGGCAGGTCGGCTGCAAACGCAGACGAGTCGGAGTCCGG ACTCCTCAGCAATGCACAGGCTCCTGGGCAGACGGATATCACGAATCCGCTCGGTCGCTGGAGGACCGGTGGTTA TGGACCAGTCGACCAGGAAGACGAGCCCTCGTATACTTCTTACGACGCTTACCGTTCACATGGGTAA |