Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280

General Properties

Protein ID	Pro_DTO377G3_2|g7769.t1
Gene name
Location	scaffold_26:40252..42129
Strand	-
Gene length (bp)	1877
Transcript length (bp)	1716
Coding sequence length (bp)	1716
Protein length (aa)	572

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02776	TPP_enzyme_N	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	2.8E-32	16	188
PF00205	TPP_enzyme_M	Thiamine pyrophosphate enzyme, central domain	7.5E-23	212	326
PF02775	TPP_enzyme_C	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	1.6E-13	412	532

GO

GO Term	Description	Terminal node
GO:0000287	magnesium ion binding	Yes
GO:0003824	catalytic activity	Yes
GO:0030976	thiamine pyrophosphate binding	Yes
GO:0097159	organic cyclic compound binding	No
GO:0036094	small molecule binding	No
GO:0043168	anion binding	No
GO:0043169	cation binding	No
GO:0046872	metal ion binding	No
GO:1901363	heterocyclic compound binding	No
GO:0005488	binding	No
GO:0050662	coenzyme binding	No
GO:0048037	cofactor binding	No
GO:0019842	vitamin binding	No
GO:1901681	sulfur compound binding	No
GO:0043167	ion binding	No
GO:0003674	molecular_function	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 60	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g7769.t1 MVSTDIATRELNNPVDVAEYLFRRLHEVGIRSLHGLPGDYNLVALDYLPKCGLNWVGNCNELNAGYAADGYARVN GISAIVTTFGVGELSALNAIAGAYSEFVPVIHIVGQPTTQSQRDGMLLHHTLGNGDFNVFTKMSEGISCYVARLN EPKDAATLIDSAIRECWIRSRPVYITLPTDMVAAKVDGDRLKTPIDLSLPTNDPEKEDYVVDVVLKYLEAAKNPV ILVDACAIRHRALDEVHDLVEKSGLPTFVTPMGKGAVNETHKNFGGVYAGNGSNAGVSEAVESSDLILSIGGIKS DFNTTGFTYRVGQLNSIDFHSTFVRVRYSEYPNINMKGVLRKVVERMSTLTHAPIPPASNRLPESEKNSTDQTIT HKWLWPIVGQWLRENDIILTETGTANFGIWDTRFPANVTAISQVLWGSIGYAMGACQGAALAAKELGDRRTILFI GDGSIQLTVQELSTILKKKLNPIVFVICNDGYTIERYIHGWDAGYNDIQPWDFANIPKVFGGDKDNYAGYRIKTR DELNELFTKEEFNVSDKLRLVELYMPRDDAPAALKLTAEAAAQRNK*
Coding	>Pro_DTO377G3_2|g7769.t1 ATGGTGTCTACCGATATTGCTACCAGGGAACTAAATAATCCCGTGGATGTTGCCGAATACTTATTCCGACGTCTT CACGAGGTCGGAATCCGCTCATTGCATGGTCTACCCGGTGATTACAATCTTGTAGCATTGGATTACCTGCCTAAG TGTGGTCTCAATTGGGTTGGAAACTGTAACGAGCTTAATGCCGGTTATGCCGCCGATGGTTATGCTCGTGTTAAT GGCATCAGTGCTATTGTCACCACATTCGGTGTTGGAGAGCTGTCCGCCCTCAATGCCATCGCAGGAGCCTACTCC GAATTCGTCCCAGTCATCCATATCGTTGGTCAGCCCACCACTCAGTCTCAAAGGGACGGAATGTTGTTGCACCAC ACTCTTGGAAACGGTGACTTCAATGTATTTACCAAGATGAGCGAGGGAATCTCGTGCTACGTCGCACGCCTGAAT GAACCCAAGGACGCAGCCACTCTGATCGACAGTGCTATTCGTGAATGCTGGATCCGCAGCCGTCCCGTGTACATC ACTCTGCCAACTGATATGGTTGCTGCTAAGGTCGATGGCGACCGCCTCAAGACGCCGATTGATCTTTCATTGCCC ACGAATGACCCGGAGAAGGAGGATTACGTGGTCGATGTTGTCCTGAAGTATCTCGAGGCCGCAAAGAACCCTGTC ATTTTGGTTGACGCCTGTGCCATTCGTCACCGCGCACTAGATGAAGTGCACGATTTGGTGGAGAAGTCTGGATTG CCAACCTTTGTGACTCCGATGGGCAAGGGAGCTGTGAACGAGACCCACAAGAACTTCGGTGGTGTTTATGCTGGC AATGGGTCTAACGCTGGAGTCAGCGAGGCCGTTGAATCCTCCGATCTCATTCTGAGCATTGGAGGAATCAAGTCC GATTTCAACACCACCGGTTTCACTTACCGTGTTGGACAGCTAAACAGCATTGACTTCCATAGTACCTTTGTGAGA GTGCGGTACTCGGAGTATCCTAATATCAACATGAAAGGTGTCTTGAGGAAGGTCGTTGAGCGGATGAGTACTCTC ACCCATGCTCCTATTCCCCCGGCTTCGAACCGACTACCCGAAAGCGAGAAAAACTCTACCGATCAAACCATCACC CACAAGTGGCTCTGGCCCATCGTCGGACAGTGGCTCAGGGAAAATGACATCATCCTTACGGAGACTGGCACTGCC AACTTCGGTATTTGGGACACCCGCTTCCCCGCGAATGTGACTGCCATCAGCCAAGTTCTCTGGGGCAGCATTGGC TATGCCATGGGAGCTTGTCAAGGCGCTGCCCTCGCTGCTAAGGAGTTGGGAGATCGTCGAACCATTCTCTTCATT GGCGACGGAAGTATCCAACTGACTGTACAGGAACTAAGCACCATCCTGAAGAAGAAGTTGAACCCTATTGTTTTC GTTATCTGCAACGACGGCTACACTATTGAGCGATACATCCATGGATGGGACGCAGGTTACAACGACATCCAGCCA TGGGACTTTGCCAACATTCCCAAGGTCTTCGGAGGAGACAAGGACAACTACGCAGGCTATCGTATCAAGACCCGT GACGAACTCAACGAGCTGTTCACCAAGGAGGAATTCAACGTTTCCGACAAGCTTCGACTGGTCGAGCTGTACATG CCTCGTGATGATGCCCCTGCGGCCTTGAAATTGACCGCCGAGGCTGCTGCGCAGCGCAACAAATAA
Transcript	>Pro_DTO377G3_2|g7769.t1 ATGGTGTCTACCGATATTGCTACCAGGGAACTAAATAATCCCGTGGATGTTGCCGAATACTTATTCCGACGTCTT CACGAGGTCGGAATCCGCTCATTGCATGGTCTACCCGGTGATTACAATCTTGTAGCATTGGATTACCTGCCTAAG TGTGGTCTCAATTGGGTTGGAAACTGTAACGAGCTTAATGCCGGTTATGCCGCCGATGGTTATGCTCGTGTTAAT GGCATCAGTGCTATTGTCACCACATTCGGTGTTGGAGAGCTGTCCGCCCTCAATGCCATCGCAGGAGCCTACTCC GAATTCGTCCCAGTCATCCATATCGTTGGTCAGCCCACCACTCAGTCTCAAAGGGACGGAATGTTGTTGCACCAC ACTCTTGGAAACGGTGACTTCAATGTATTTACCAAGATGAGCGAGGGAATCTCGTGCTACGTCGCACGCCTGAAT GAACCCAAGGACGCAGCCACTCTGATCGACAGTGCTATTCGTGAATGCTGGATCCGCAGCCGTCCCGTGTACATC ACTCTGCCAACTGATATGGTTGCTGCTAAGGTCGATGGCGACCGCCTCAAGACGCCGATTGATCTTTCATTGCCC ACGAATGACCCGGAGAAGGAGGATTACGTGGTCGATGTTGTCCTGAAGTATCTCGAGGCCGCAAAGAACCCTGTC ATTTTGGTTGACGCCTGTGCCATTCGTCACCGCGCACTAGATGAAGTGCACGATTTGGTGGAGAAGTCTGGATTG CCAACCTTTGTGACTCCGATGGGCAAGGGAGCTGTGAACGAGACCCACAAGAACTTCGGTGGTGTTTATGCTGGC AATGGGTCTAACGCTGGAGTCAGCGAGGCCGTTGAATCCTCCGATCTCATTCTGAGCATTGGAGGAATCAAGTCC GATTTCAACACCACCGGTTTCACTTACCGTGTTGGACAGCTAAACAGCATTGACTTCCATAGTACCTTTGTGAGA GTGCGGTACTCGGAGTATCCTAATATCAACATGAAAGGTGTCTTGAGGAAGGTCGTTGAGCGGATGAGTACTCTC ACCCATGCTCCTATTCCCCCGGCTTCGAACCGACTACCCGAAAGCGAGAAAAACTCTACCGATCAAACCATCACC CACAAGTGGCTCTGGCCCATCGTCGGACAGTGGCTCAGGGAAAATGACATCATCCTTACGGAGACTGGCACTGCC AACTTCGGTATTTGGGACACCCGCTTCCCCGCGAATGTGACTGCCATCAGCCAAGTTCTCTGGGGCAGCATTGGC TATGCCATGGGAGCTTGTCAAGGCGCTGCCCTCGCTGCTAAGGAGTTGGGAGATCGTCGAACCATTCTCTTCATT GGCGACGGAAGTATCCAACTGACTGTACAGGAACTAAGCACCATCCTGAAGAAGAAGTTGAACCCTATTGTTTTC GTTATCTGCAACGACGGCTACACTATTGAGCGATACATCCATGGATGGGACGCAGGTTACAACGACATCCAGCCA TGGGACTTTGCCAACATTCCCAAGGTCTTCGGAGGAGACAAGGACAACTACGCAGGCTATCGTATCAAGACCCGT GACGAACTCAACGAGCTGTTCACCAAGGAGGAATTCAACGTTTCCGACAAGCTTCGACTGGTCGAGCTGTACATG CCTCGTGATGATGCCCCTGCGGCCTTGAAATTGACCGCCGAGGCTGCTGCGCAGCGCAACAAATAA
Gene	>Pro_DTO377G3_2|g7769.t1 ATGGTGTCTACCGATATTGCTACCAGGGAACTAAATAATCCCGTGGATGTTGCCGAATACTTATTCCGACGTCTT CACGAGGTCGGAATCCGCTCATTGCATGGTCTACCCGGTGATTACAATCTTGTAGCATTGGATTACCTGCCTAAG TGTGGTCTCAATTGGGTTGGAAACTGTAACGAGCTTAATGCCGGTAAGACAGACTTGACGACGAATGAACAATCC CCATCTAACATCACCTCCTCTTAGGTTATGCCGCCGATGGTTATGCTCGTGTTAATGGCATCAGTGCTATTGTCA CCACATTCGGTGTTGGAGAGCTGTCCGCCCTCAATGCCATCGCAGGAGCCTACTCCGAATTCGTCCCAGTCATCC ATATCGTTGGTCAGCCCACCACTCAGTCTCAAAGGGACGGAATGTTGTTGCACCACACTCTTGGAAACGGTGACT TCAATGTATTTACCAAGATGAGCGAGGGAATCTCGTGCTACGTCGCACGCCTGAATGAACCCAAGGACGCAGCCA CTCTGATCGACAGTGCTATTCGTGAATGCTGGATCCGCAGCCGTCCCGTGTACATCACTCTGCCAACTGATATGG TTGCTGCTAAGGTCGATGGCGACCGCCTCAAGACGCCGATTGATCTTTCATTGCCCACGAATGACCCGGAGAAGG AGGATTACGTGGTCGATGTTGTCCTGAAGTATCTCGAGGCCGCAAAGAACCCTGTCATTTTGGTTGACGCCTGTG CCATTCGTCACCGCGCACTAGATGAAGTGCACGATTTGGTGGAGAAGTCTGGATTGCCAACCTTTGTGACTCCGA TGGGCAAGGGAGCTGTGAACGAGACCCACAAGAACTTCGGTGGTGTTTATGCTGGCAATGGGTCTAACGCTGGAG TCAGCGAGGCCGTTGAATCCTCCGATCTCATTCTGAGCATTGGAGGAATCAAGTCCGATTTCAACACCACCGGTT TCACTTACCGTGTTGGACAGCTAAACAGCATTGACTTCCATAGTACCTTTGTGAGAGTGCGGTACTCGGAGTATC CTAATATCAACATGAAAGGTGTCTTGAGGAAGGTCGTTGAGCGGATGAGTACTCTCACCCATGCTCCTATTCCCC CGGCTTCGAACCGACTACCCGAAAGCGAGAAAAACTCTACCGATCAAACCATCACCCACAAGTGGCTCTGGCCCA TCGTCGGACAGTGGCTCAGGGAAAATGACATCATCCTTACGGAGACTGGCACTGCCAACTTCGGTATTTGGGACA CCCGCTTCCCCGCGAATGTGACTGCCATCAGCCAAGTTCTCTGGGGCAGCATTGGCTATGCCATGGGAGCTTGTC AAGGCGCTGCCCTCGCTGCTAAGGAGTTGGGAGATCGTCGAACCATTCTCTTCATTGGCGACGGAAGTATCCAAC TGACTGTACAGGAACTAAGCACCATCCTGAAGAAGAAGTTGAACCCTATTGTGTAAGCATTCCCAGCAGCCCGGA ATGCCCATATCATATACTAACCATCTCCAGTTTCGTTATCTGCAACGACGGCTACACTATTGAGCGATACATCCA TGGATGGGACGCAGGTTACAACGACATCCAGCCATGGGACTTTGCCAACATTCCCAAGGTCTTCGGAGGAGACAA GGACAACTACGCAGGCTATCGTATCAAGACCCGTGACGAACTCAACGAGCTGTTCACCAAGGAGGAATTCAACGT TTCCGACAAGCTTCGAGTGAGTTATCAATACAAAGAAGTCCCAAACTGTTTGCTAACACGGTATATAGCTGGTCG AGCTGTACATGCCTCGTGATGATGCCCCTGCGGCCTTGAAATTGACCGCCGAGGCTGCTGCGCAGCGCAACAAAT AA