Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7765.t1
Gene name
Locationscaffold_26:25223..26954
Strand-
Gene length (bp)1731
Transcript length (bp)1731
Coding sequence length (bp)1731
Protein length (aa) 577

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00415 RCC1 Regulator of chromosome condensation (RCC1) repeat 1.6E-04 285 329
PF00415 RCC1 Regulator of chromosome condensation (RCC1) repeat 3.6E-06 332 390
PF00415 RCC1 Regulator of chromosome condensation (RCC1) repeat 1.3E-04 502 534
PF13540 RCC1_2 Regulator of chromosome condensation (RCC1) repeat 1.6E-11 316 345

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 49 71 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7765.t1
MFTTQLRRPATHSVLAFRPLRNSTAQSLNAPWSRSASSKSRKAGPSSHWIRNSLGFAVTGTAVFLGYSYVADGGK
EAWFSRPQVIKKEPVDVNDLEAQFVQEKRSLKSPGVYTWGSNVYRVVDPGSKDTDIKTPRRFKYFNGQVLRDLKI
EEKSGAAITENGDLVQWGQAFSESDFKPTVTLTGRNLTSLVLSESRIIALSSDGTVYSLPTSKDGQNTGPKTTES
SWVPFWPNQSNLSYRVLNPSLKLGEKVTAISGGQEHVLLLTSSGRVFSAASSTENYPSLGQLGVEGLTWFTRPKG
PADKCHEVTVLKGSKIVQIACGDYHSLALSKDGRMFGFGDNSFGQLGVDFEAERSFKDAPFEIKAQKLYSRNRYL
PKVTSIAAGGANTFFSVDAKRILGYEEEAADVHDLGNVTADTWACGRGIWGTLGNGRWVHLQDSPTKVKALSGVS
EYDEKTKQMTPIRIRSMSVGTTHVAAILDNKTNVTKTIKDTLDQTKDWGYDVLWWGGNEHFQLGTGKRSNQSKPT
YINAPPENKKSQGEARLQIMPRHKGKVGKRNVSMEQRVECGRHVSAIYSAV*
Coding >Pro_DTO377G3_2|g7765.t1
ATGTTCACAACCCAACTGCGACGGCCCGCGACGCACTCCGTCCTCGCTTTCCGCCCACTCAGAAACTCGACGGCT
CAGTCACTAAATGCGCCATGGTCCCGATCTGCCAGCAGTAAATCGCGAAAGGCAGGCCCGTCATCGCACTGGATT
CGCAATTCCCTCGGGTTTGCCGTGACAGGAACTGCAGTCTTTTTGGGATACTCATACGTGGCTGATGGTGGAAAG
GAGGCTTGGTTCAGTCGTCCGCAGGTTATAAAGAAAGAGCCCGTTGACGTCAACGATCTCGAAGCTCAGTTCGTC
CAAGAAAAACGAAGCCTGAAAAGCCCCGGCGTCTACACATGGGGGTCGAACGTTTATCGCGTGGTGGATCCAGGA
TCTAAAGATACCGATATCAAGACTCCTCGGCGCTTCAAATACTTTAATGGCCAGGTTCTGAGGGATCTCAAGATC
GAGGAAAAGTCCGGTGCAGCAATCACCGAGAATGGAGATCTAGTGCAATGGGGCCAGGCGTTCTCGGAGTCGGAC
TTCAAACCCACGGTAACTCTGACTGGCAGGAATCTCACCTCACTCGTTCTGTCCGAAAGTCGAATCATTGCGCTG
TCCTCGGATGGGACTGTATACTCACTGCCCACATCCAAGGATGGGCAAAACACCGGCCCAAAGACAACGGAAAGC
TCTTGGGTTCCCTTCTGGCCCAATCAGTCTAATCTGAGCTACCGTGTACTGAACCCATCTTTGAAGCTTGGTGAA
AAGGTCACCGCAATCAGTGGAGGACAGGAACATGTGCTGCTTCTCACAAGCTCTGGTCGAGTCTTCTCTGCGGCG
TCATCCACCGAAAATTACCCTTCGCTAGGTCAACTCGGTGTGGAGGGACTTACCTGGTTCACCAGACCCAAGGGG
CCAGCAGATAAATGCCATGAAGTTACAGTTCTCAAAGGCTCCAAGATTGTGCAAATTGCCTGTGGTGACTACCAC
TCACTGGCGCTAAGCAAAGATGGCCGTATGTTTGGCTTTGGCGACAACTCATTTGGCCAACTAGGTGTGGATTTT
GAAGCTGAGAGGTCTTTCAAGGATGCTCCTTTCGAAATCAAGGCTCAAAAACTCTATAGCAGAAACCGCTATCTG
CCCAAGGTTACCAGCATTGCTGCTGGTGGCGCCAACACCTTCTTCTCCGTTGATGCCAAGCGCATTCTAGGGTAC
GAAGAAGAGGCAGCCGATGTTCATGATCTTGGAAATGTAACTGCAGACACATGGGCCTGTGGTAGGGGAATTTGG
GGTACTCTCGGCAATGGCAGATGGGTTCACCTGCAGGATTCGCCTACCAAGGTGAAAGCTTTAAGTGGTGTGAGC
GAGTATGACGAGAAGACAAAACAAATGACCCCTATCCGCATTAGGTCCATGTCTGTCGGTACAACACATGTCGCG
GCTATCCTGGACAACAAGACCAATGTCACCAAGACTATCAAGGACACTTTGGATCAAACTAAAGACTGGGGCTAT
GATGTACTCTGGTGGGGAGGCAACGAGCATTTCCAGCTGGGGACAGGAAAGCGAAGCAATCAATCCAAGCCTACT
TACATCAACGCACCCCCCGAAAACAAGAAAAGCCAGGGCGAGGCGCGATTGCAGATCATGCCTCGTCACAAGGGC
AAGGTCGGGAAGCGCAATGTGAGCATGGAACAGCGTGTTGAATGTGGGCGTCATGTCTCTGCCATTTATTCTGCG
GTGTAA
Transcript >Pro_DTO377G3_2|g7765.t1
ATGTTCACAACCCAACTGCGACGGCCCGCGACGCACTCCGTCCTCGCTTTCCGCCCACTCAGAAACTCGACGGCT
CAGTCACTAAATGCGCCATGGTCCCGATCTGCCAGCAGTAAATCGCGAAAGGCAGGCCCGTCATCGCACTGGATT
CGCAATTCCCTCGGGTTTGCCGTGACAGGAACTGCAGTCTTTTTGGGATACTCATACGTGGCTGATGGTGGAAAG
GAGGCTTGGTTCAGTCGTCCGCAGGTTATAAAGAAAGAGCCCGTTGACGTCAACGATCTCGAAGCTCAGTTCGTC
CAAGAAAAACGAAGCCTGAAAAGCCCCGGCGTCTACACATGGGGGTCGAACGTTTATCGCGTGGTGGATCCAGGA
TCTAAAGATACCGATATCAAGACTCCTCGGCGCTTCAAATACTTTAATGGCCAGGTTCTGAGGGATCTCAAGATC
GAGGAAAAGTCCGGTGCAGCAATCACCGAGAATGGAGATCTAGTGCAATGGGGCCAGGCGTTCTCGGAGTCGGAC
TTCAAACCCACGGTAACTCTGACTGGCAGGAATCTCACCTCACTCGTTCTGTCCGAAAGTCGAATCATTGCGCTG
TCCTCGGATGGGACTGTATACTCACTGCCCACATCCAAGGATGGGCAAAACACCGGCCCAAAGACAACGGAAAGC
TCTTGGGTTCCCTTCTGGCCCAATCAGTCTAATCTGAGCTACCGTGTACTGAACCCATCTTTGAAGCTTGGTGAA
AAGGTCACCGCAATCAGTGGAGGACAGGAACATGTGCTGCTTCTCACAAGCTCTGGTCGAGTCTTCTCTGCGGCG
TCATCCACCGAAAATTACCCTTCGCTAGGTCAACTCGGTGTGGAGGGACTTACCTGGTTCACCAGACCCAAGGGG
CCAGCAGATAAATGCCATGAAGTTACAGTTCTCAAAGGCTCCAAGATTGTGCAAATTGCCTGTGGTGACTACCAC
TCACTGGCGCTAAGCAAAGATGGCCGTATGTTTGGCTTTGGCGACAACTCATTTGGCCAACTAGGTGTGGATTTT
GAAGCTGAGAGGTCTTTCAAGGATGCTCCTTTCGAAATCAAGGCTCAAAAACTCTATAGCAGAAACCGCTATCTG
CCCAAGGTTACCAGCATTGCTGCTGGTGGCGCCAACACCTTCTTCTCCGTTGATGCCAAGCGCATTCTAGGGTAC
GAAGAAGAGGCAGCCGATGTTCATGATCTTGGAAATGTAACTGCAGACACATGGGCCTGTGGTAGGGGAATTTGG
GGTACTCTCGGCAATGGCAGATGGGTTCACCTGCAGGATTCGCCTACCAAGGTGAAAGCTTTAAGTGGTGTGAGC
GAGTATGACGAGAAGACAAAACAAATGACCCCTATCCGCATTAGGTCCATGTCTGTCGGTACAACACATGTCGCG
GCTATCCTGGACAACAAGACCAATGTCACCAAGACTATCAAGGACACTTTGGATCAAACTAAAGACTGGGGCTAT
GATGTACTCTGGTGGGGAGGCAACGAGCATTTCCAGCTGGGGACAGGAAAGCGAAGCAATCAATCCAAGCCTACT
TACATCAACGCACCCCCCGAAAACAAGAAAAGCCAGGGCGAGGCGCGATTGCAGATCATGCCTCGTCACAAGGGC
AAGGTCGGGAAGCGCAATGTGAGCATGGAACAGCGTGTTGAATGTGGGCGTCATGTCTCTGCCATTTATTCTGCG
GTGTAA
Gene >Pro_DTO377G3_2|g7765.t1
ATGTTCACAACCCAACTGCGACGGCCCGCGACGCACTCCGTCCTCGCTTTCCGCCCACTCAGAAACTCGACGGCT
CAGTCACTAAATGCGCCATGGTCCCGATCTGCCAGCAGTAAATCGCGAAAGGCAGGCCCGTCATCGCACTGGATT
CGCAATTCCCTCGGGTTTGCCGTGACAGGAACTGCAGTCTTTTTGGGATACTCATACGTGGCTGATGGTGGAAAG
GAGGCTTGGTTCAGTCGTCCGCAGGTTATAAAGAAAGAGCCCGTTGACGTCAACGATCTCGAAGCTCAGTTCGTC
CAAGAAAAACGAAGCCTGAAAAGCCCCGGCGTCTACACATGGGGGTCGAACGTTTATCGCGTGGTGGATCCAGGA
TCTAAAGATACCGATATCAAGACTCCTCGGCGCTTCAAATACTTTAATGGCCAGGTTCTGAGGGATCTCAAGATC
GAGGAAAAGTCCGGTGCAGCAATCACCGAGAATGGAGATCTAGTGCAATGGGGCCAGGCGTTCTCGGAGTCGGAC
TTCAAACCCACGGTAACTCTGACTGGCAGGAATCTCACCTCACTCGTTCTGTCCGAAAGTCGAATCATTGCGCTG
TCCTCGGATGGGACTGTATACTCACTGCCCACATCCAAGGATGGGCAAAACACCGGCCCAAAGACAACGGAAAGC
TCTTGGGTTCCCTTCTGGCCCAATCAGTCTAATCTGAGCTACCGTGTACTGAACCCATCTTTGAAGCTTGGTGAA
AAGGTCACCGCAATCAGTGGAGGACAGGAACATGTGCTGCTTCTCACAAGCTCTGGTCGAGTCTTCTCTGCGGCG
TCATCCACCGAAAATTACCCTTCGCTAGGTCAACTCGGTGTGGAGGGACTTACCTGGTTCACCAGACCCAAGGGG
CCAGCAGATAAATGCCATGAAGTTACAGTTCTCAAAGGCTCCAAGATTGTGCAAATTGCCTGTGGTGACTACCAC
TCACTGGCGCTAAGCAAAGATGGCCGTATGTTTGGCTTTGGCGACAACTCATTTGGCCAACTAGGTGTGGATTTT
GAAGCTGAGAGGTCTTTCAAGGATGCTCCTTTCGAAATCAAGGCTCAAAAACTCTATAGCAGAAACCGCTATCTG
CCCAAGGTTACCAGCATTGCTGCTGGTGGCGCCAACACCTTCTTCTCCGTTGATGCCAAGCGCATTCTAGGGTAC
GAAGAAGAGGCAGCCGATGTTCATGATCTTGGAAATGTAACTGCAGACACATGGGCCTGTGGTAGGGGAATTTGG
GGTACTCTCGGCAATGGCAGATGGGTTCACCTGCAGGATTCGCCTACCAAGGTGAAAGCTTTAAGTGGTGTGAGC
GAGTATGACGAGAAGACAAAACAAATGACCCCTATCCGCATTAGGTCCATGTCTGTCGGTACAACACATGTCGCG
GCTATCCTGGACAACAAGACCAATGTCACCAAGACTATCAAGGACACTTTGGATCAAACTAAAGACTGGGGCTAT
GATGTACTCTGGTGGGGAGGCAACGAGCATTTCCAGCTGGGGACAGGAAAGCGAAGCAATCAATCCAAGCCTACT
TACATCAACGCACCCCCCGAAAACAAGAAAAGCCAGGGCGAGGCGCGATTGCAGATCATGCCTCGTCACAAGGGC
AAGGTCGGGAAGCGCAATGTGAGCATGGAACAGCGTGTTGAATGTGGGCGTCATGTCTCTGCCATTTATTCTGCG
GTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail