Protein ID | Pro_DTO377G3_2|g7765.t1 |
Gene name | |
Location | scaffold_26:25223..26954 |
Strand | - |
Gene length (bp) | 1731 |
Transcript length (bp) | 1731 |
Coding sequence length (bp) | 1731 |
Protein length (aa) | 577 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00415 | RCC1 | Regulator of chromosome condensation (RCC1) repeat | 1.8E-04 | 285 | 329 |
PF00415 | RCC1 | Regulator of chromosome condensation (RCC1) repeat | 3.4E-06 | 332 | 390 |
PF00415 | RCC1 | Regulator of chromosome condensation (RCC1) repeat | 1.6E-04 | 502 | 533 |
PF13540 | RCC1_2 | Regulator of chromosome condensation (RCC1) repeat | 1.7E-11 | 316 | 345 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 49 | 71 | 22 |
Orthofinder run ID | 2 |
Orthogroup | 9024 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g7765.t1 MFTTQLRRPATHSVLAFRPLRNSTAQSLNAPWSRSASSKSRKAGPSSHWIRNSLGFAVTGTAVFLGYSYVADGGK EAWFSRPQVIKKEPVDVNDLEAQFVQEKRSLKSPGVYTWGSNVYRVVDPGSKDTDIKTPRRFKYFNGQVLRDLKI EEKSGAAITENGDLVQWGQAFSESDFKPTVTLTGRNLTSLVLSESRIIALSSDGTVYSLPTSKDGQNTGPKTTES SWVPFWPNQSNLSYRVLNPSLKLGEKVTAISGGQEHVLLLTSSGRVFSAASSTENYPSLGQLGVEGLTWFTRPKG PADKCHEVTVLKGSKIVQIACGDYHSLALSKDGRMFGFGDNSFGQLGVDFEAERSFKDAPFEIKAQKLYSRNRYL PKVTSIAAGGANTFFSVDAKRILGYEEEAADVHDLGNVTADTWACGRGIWGTLGNGRWVHLQDSPTKVKALSGVS EYDEKTKQMTPIRIRSMSVGTTHVAAILDNKTNVTKTIKDTLDQTKDWGYDVLWWGGNEHFQLGTGKRSNQSKPT YINAPPENKKSQGEARLQIMPRHKGKVGKRNVSMEQRVECGRHVSAIYSAV* |
Coding | >Pro_DTO377G3_2|g7765.t1 ATGTTCACAACCCAACTGCGACGGCCCGCGACGCACTCCGTCCTCGCTTTCCGCCCACTCAGAAACTCGACGGCT CAGTCACTAAATGCGCCATGGTCCCGATCTGCCAGCAGTAAATCGCGAAAGGCAGGCCCGTCATCGCACTGGATT CGCAATTCCCTCGGGTTTGCCGTGACAGGAACTGCAGTCTTTTTGGGATACTCATACGTGGCTGATGGTGGAAAG GAGGCTTGGTTCAGTCGTCCGCAGGTTATAAAGAAAGAGCCCGTTGACGTCAACGATCTCGAAGCTCAGTTCGTC CAAGAAAAACGAAGCCTGAAAAGCCCCGGCGTCTACACATGGGGGTCGAACGTTTATCGCGTGGTGGATCCAGGA TCTAAAGATACCGATATCAAGACTCCTCGGCGCTTCAAATACTTTAATGGCCAGGTTCTGAGGGATCTCAAGATC GAGGAAAAGTCCGGTGCAGCAATCACCGAGAATGGAGATCTAGTGCAATGGGGCCAGGCGTTCTCGGAGTCGGAC TTCAAACCCACGGTAACTCTGACTGGCAGGAATCTCACCTCACTCGTTCTGTCCGAAAGTCGAATCATTGCGCTG TCCTCGGATGGGACTGTATACTCACTGCCCACATCCAAGGATGGGCAAAACACCGGCCCAAAGACAACGGAAAGC TCTTGGGTTCCCTTCTGGCCCAATCAGTCTAATCTGAGCTACCGTGTACTGAACCCATCTTTGAAGCTTGGTGAA AAGGTCACCGCAATCAGTGGAGGACAGGAACATGTGCTGCTTCTCACAAGCTCTGGTCGAGTCTTCTCTGCGGCG TCATCCACCGAAAATTACCCTTCGCTAGGTCAACTCGGTGTGGAGGGACTTACCTGGTTCACCAGACCCAAGGGG CCAGCAGATAAATGCCATGAAGTTACAGTTCTCAAAGGCTCCAAGATTGTGCAAATTGCCTGTGGTGACTACCAC TCACTGGCGCTAAGCAAAGATGGCCGTATGTTTGGCTTTGGCGACAACTCATTTGGCCAACTAGGTGTGGATTTT GAAGCTGAGAGGTCTTTCAAGGATGCTCCTTTCGAAATCAAGGCTCAAAAACTCTATAGCAGAAACCGCTATCTG CCCAAGGTTACCAGCATTGCTGCTGGTGGCGCCAACACCTTCTTCTCCGTTGATGCCAAGCGCATTCTAGGGTAC GAAGAAGAGGCAGCCGATGTTCATGATCTTGGAAATGTAACTGCAGACACATGGGCCTGTGGTAGGGGAATTTGG GGTACTCTCGGCAATGGCAGATGGGTTCACCTGCAGGATTCGCCTACCAAGGTGAAAGCTTTAAGTGGTGTGAGC GAGTATGACGAGAAGACAAAACAAATGACCCCTATCCGCATTAGGTCCATGTCTGTCGGTACAACACATGTCGCG GCTATCCTGGACAACAAGACCAATGTCACCAAGACTATCAAGGACACTTTGGATCAAACTAAAGACTGGGGCTAT GATGTACTCTGGTGGGGAGGCAACGAGCATTTCCAGCTGGGGACAGGAAAGCGAAGCAATCAATCCAAGCCTACT TACATCAACGCACCCCCCGAAAACAAGAAAAGCCAGGGCGAGGCGCGATTGCAGATCATGCCTCGTCACAAGGGC AAGGTCGGGAAGCGCAATGTGAGCATGGAACAGCGTGTTGAATGTGGGCGTCATGTCTCTGCCATTTATTCTGCG GTGTAA |
Transcript | >Pro_DTO377G3_2|g7765.t1 ATGTTCACAACCCAACTGCGACGGCCCGCGACGCACTCCGTCCTCGCTTTCCGCCCACTCAGAAACTCGACGGCT CAGTCACTAAATGCGCCATGGTCCCGATCTGCCAGCAGTAAATCGCGAAAGGCAGGCCCGTCATCGCACTGGATT CGCAATTCCCTCGGGTTTGCCGTGACAGGAACTGCAGTCTTTTTGGGATACTCATACGTGGCTGATGGTGGAAAG GAGGCTTGGTTCAGTCGTCCGCAGGTTATAAAGAAAGAGCCCGTTGACGTCAACGATCTCGAAGCTCAGTTCGTC CAAGAAAAACGAAGCCTGAAAAGCCCCGGCGTCTACACATGGGGGTCGAACGTTTATCGCGTGGTGGATCCAGGA TCTAAAGATACCGATATCAAGACTCCTCGGCGCTTCAAATACTTTAATGGCCAGGTTCTGAGGGATCTCAAGATC GAGGAAAAGTCCGGTGCAGCAATCACCGAGAATGGAGATCTAGTGCAATGGGGCCAGGCGTTCTCGGAGTCGGAC TTCAAACCCACGGTAACTCTGACTGGCAGGAATCTCACCTCACTCGTTCTGTCCGAAAGTCGAATCATTGCGCTG TCCTCGGATGGGACTGTATACTCACTGCCCACATCCAAGGATGGGCAAAACACCGGCCCAAAGACAACGGAAAGC TCTTGGGTTCCCTTCTGGCCCAATCAGTCTAATCTGAGCTACCGTGTACTGAACCCATCTTTGAAGCTTGGTGAA AAGGTCACCGCAATCAGTGGAGGACAGGAACATGTGCTGCTTCTCACAAGCTCTGGTCGAGTCTTCTCTGCGGCG TCATCCACCGAAAATTACCCTTCGCTAGGTCAACTCGGTGTGGAGGGACTTACCTGGTTCACCAGACCCAAGGGG CCAGCAGATAAATGCCATGAAGTTACAGTTCTCAAAGGCTCCAAGATTGTGCAAATTGCCTGTGGTGACTACCAC TCACTGGCGCTAAGCAAAGATGGCCGTATGTTTGGCTTTGGCGACAACTCATTTGGCCAACTAGGTGTGGATTTT GAAGCTGAGAGGTCTTTCAAGGATGCTCCTTTCGAAATCAAGGCTCAAAAACTCTATAGCAGAAACCGCTATCTG CCCAAGGTTACCAGCATTGCTGCTGGTGGCGCCAACACCTTCTTCTCCGTTGATGCCAAGCGCATTCTAGGGTAC GAAGAAGAGGCAGCCGATGTTCATGATCTTGGAAATGTAACTGCAGACACATGGGCCTGTGGTAGGGGAATTTGG GGTACTCTCGGCAATGGCAGATGGGTTCACCTGCAGGATTCGCCTACCAAGGTGAAAGCTTTAAGTGGTGTGAGC GAGTATGACGAGAAGACAAAACAAATGACCCCTATCCGCATTAGGTCCATGTCTGTCGGTACAACACATGTCGCG GCTATCCTGGACAACAAGACCAATGTCACCAAGACTATCAAGGACACTTTGGATCAAACTAAAGACTGGGGCTAT GATGTACTCTGGTGGGGAGGCAACGAGCATTTCCAGCTGGGGACAGGAAAGCGAAGCAATCAATCCAAGCCTACT TACATCAACGCACCCCCCGAAAACAAGAAAAGCCAGGGCGAGGCGCGATTGCAGATCATGCCTCGTCACAAGGGC AAGGTCGGGAAGCGCAATGTGAGCATGGAACAGCGTGTTGAATGTGGGCGTCATGTCTCTGCCATTTATTCTGCG GTGTAA |
Gene | >Pro_DTO377G3_2|g7765.t1 ATGTTCACAACCCAACTGCGACGGCCCGCGACGCACTCCGTCCTCGCTTTCCGCCCACTCAGAAACTCGACGGCT CAGTCACTAAATGCGCCATGGTCCCGATCTGCCAGCAGTAAATCGCGAAAGGCAGGCCCGTCATCGCACTGGATT CGCAATTCCCTCGGGTTTGCCGTGACAGGAACTGCAGTCTTTTTGGGATACTCATACGTGGCTGATGGTGGAAAG GAGGCTTGGTTCAGTCGTCCGCAGGTTATAAAGAAAGAGCCCGTTGACGTCAACGATCTCGAAGCTCAGTTCGTC CAAGAAAAACGAAGCCTGAAAAGCCCCGGCGTCTACACATGGGGGTCGAACGTTTATCGCGTGGTGGATCCAGGA TCTAAAGATACCGATATCAAGACTCCTCGGCGCTTCAAATACTTTAATGGCCAGGTTCTGAGGGATCTCAAGATC GAGGAAAAGTCCGGTGCAGCAATCACCGAGAATGGAGATCTAGTGCAATGGGGCCAGGCGTTCTCGGAGTCGGAC TTCAAACCCACGGTAACTCTGACTGGCAGGAATCTCACCTCACTCGTTCTGTCCGAAAGTCGAATCATTGCGCTG TCCTCGGATGGGACTGTATACTCACTGCCCACATCCAAGGATGGGCAAAACACCGGCCCAAAGACAACGGAAAGC TCTTGGGTTCCCTTCTGGCCCAATCAGTCTAATCTGAGCTACCGTGTACTGAACCCATCTTTGAAGCTTGGTGAA AAGGTCACCGCAATCAGTGGAGGACAGGAACATGTGCTGCTTCTCACAAGCTCTGGTCGAGTCTTCTCTGCGGCG TCATCCACCGAAAATTACCCTTCGCTAGGTCAACTCGGTGTGGAGGGACTTACCTGGTTCACCAGACCCAAGGGG CCAGCAGATAAATGCCATGAAGTTACAGTTCTCAAAGGCTCCAAGATTGTGCAAATTGCCTGTGGTGACTACCAC TCACTGGCGCTAAGCAAAGATGGCCGTATGTTTGGCTTTGGCGACAACTCATTTGGCCAACTAGGTGTGGATTTT GAAGCTGAGAGGTCTTTCAAGGATGCTCCTTTCGAAATCAAGGCTCAAAAACTCTATAGCAGAAACCGCTATCTG CCCAAGGTTACCAGCATTGCTGCTGGTGGCGCCAACACCTTCTTCTCCGTTGATGCCAAGCGCATTCTAGGGTAC GAAGAAGAGGCAGCCGATGTTCATGATCTTGGAAATGTAACTGCAGACACATGGGCCTGTGGTAGGGGAATTTGG GGTACTCTCGGCAATGGCAGATGGGTTCACCTGCAGGATTCGCCTACCAAGGTGAAAGCTTTAAGTGGTGTGAGC GAGTATGACGAGAAGACAAAACAAATGACCCCTATCCGCATTAGGTCCATGTCTGTCGGTACAACACATGTCGCG GCTATCCTGGACAACAAGACCAATGTCACCAAGACTATCAAGGACACTTTGGATCAAACTAAAGACTGGGGCTAT GATGTACTCTGGTGGGGAGGCAACGAGCATTTCCAGCTGGGGACAGGAAAGCGAAGCAATCAATCCAAGCCTACT TACATCAACGCACCCCCCGAAAACAAGAAAAGCCAGGGCGAGGCGCGATTGCAGATCATGCCTCGTCACAAGGGC AAGGTCGGGAAGCGCAATGTGAGCATGGAACAGCGTGTTGAATGTGGGCGTCATGTCTCTGCCATTTATTCTGCG GTGTAA |