Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7740.t1
Gene name
Locationscaffold_25:278170..280102
Strand+
Gene length (bp)1932
Transcript length (bp)1719
Coding sequence length (bp)1719
Protein length (aa) 573

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00282 Pyridoxal_deC Pyridoxal-dependent decarboxylase conserved domain 6.4E-19 148 466
PF00266 Aminotran_5 Aminotransferase class-V 2.4E-07 190 318
PF00155 Aminotran_1_2 Aminotransferase class I and II 1.0E-06 205 319
PF01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family 2.3E-04 204 319

GO

GO Term Description Terminal node
GO:0030170 pyridoxal phosphate binding Yes
GO:0019752 carboxylic acid metabolic process Yes
GO:0009058 biosynthetic process Yes
GO:0016831 carboxy-lyase activity Yes
GO:0008152 metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0016829 lyase activity No
GO:0097159 organic cyclic compound binding No
GO:0071704 organic substance metabolic process No
GO:0019842 vitamin binding No
GO:0003824 catalytic activity No
GO:0016830 carbon-carbon lyase activity No
GO:0043168 anion binding No
GO:0009987 cellular process No
GO:0043436 oxoacid metabolic process No
GO:0006082 organic acid metabolic process No
GO:0070279 vitamin B6 binding No
GO:0044281 small molecule metabolic process No
GO:0008150 biological_process No
GO:0008144 drug binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0005488 binding No
GO:0044237 cellular metabolic process No
GO:0036094 small molecule binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7740.t1
MSSSMLPVALQNKLVGYGRVSSAHLSALNIDLIRNIIFILFILRYTRKTFYSIRGYGIFGSIRNIYISLRLFCYG
LFLRVPGVSGQVDKQVSTAITKLESKLVNSGPDVTRYLTLPKEGWSPEQVRAELDKLAGLEHTRWEDGRVSGAVY
HGGAELLKLQAEAFGQFGVANPIHPDVFPGVRKMEAEVVAMVLALFNAPLDGAGVTTSGGTESILMACLAARQKA
FLERGVTEPEMIIPDTAHAAFIKACNYFKIKLHRVPCPEPEFKVDVHAVRRLINPNTVLLVGSAPNFPHGIVDDI
PALSQLATKYKIPLHVDCCLGSFVVAYLKKAGFPSPYEEEGGFDFRQPGVTSISVDTHKYGFAPKGNSVLIYRNK
SYRNNQYFIYPDWSGGVYASPSVAGSRPGALIAGCWASLMSVGENGYINSCTDIINAARKFETAVRTDPTISLHM
EILGDPIVSVVAFRSKNGAIDIYDIADDLSAKGWHLNALQSPPAIHCAFTIPTAKAVDQLIADLREVIGKELEKA
EQRKREGKSYILQRGDTSALYGVAGSIPDKSIVSRLAEGFLDTLYKA*
Coding >Pro_DTO377G3_2|g7740.t1
ATGAGCTCTTCTATGCTGCCAGTCGCCTTGCAGAACAAGCTGGTTGGCTACGGCCGGGTGTCCAGCGCGCACCTC
TCTGCCTTGAATATCGACCTTATTCGCAACATCATATTTATTCTATTCATCCTTCGGTATACGCGCAAGACCTTC
TACTCCATCCGCGGCTACGGCATCTTCGGCAGCATCCGCAACATCTACATCTCGCTCCGCCTATTCTGCTATGGC
CTCTTCCTGCGTGTCCCTGGTGTCAGCGGGCAGGTCGACAAGCAAGTGAGCACTGCTATCACGAAACTCGAGTCG
AAACTGGTAAACTCTGGGCCGGATGTCACACGGTATCTTACCCTGCCCAAGGAGGGTTGGTCGCCAGAGCAGGTC
CGCGCTGAACTTGATAAGTTGGCTGGGCTTGAACATACACGCTGGGAAGATGGTCGCGTTAGCGGTGCCGTTTAC
CATGGAGGCGCGGAGCTGTTGAAACTCCAGGCTGAAGCATTCGGGCAGTTCGGTGTCGCGAATCCGATTCATCCG
GATGTTTTCCCTGGTGTTCGGAAGATGGAGGCTGAGGTGGTTGCTATGGTTCTTGCTCTCTTCAATGCCCCCTTG
GATGGTGCCGGTGTAACCACTAGCGGTGGTACGGAGTCTATTCTTATGGCTTGCTTGGCCGCCCGGCAAAAGGCT
TTCTTGGAGCGCGGTGTTACTGAGCCCGAGATGATTATTCCCGACACAGCACACGCGGCATTTATCAAGGCATGC
AACTACTTCAAGATCAAGCTGCACCGAGTCCCTTGCCCGGAGCCCGAGTTCAAGGTCGACGTGCATGCTGTTCGC
CGTTTAATCAATCCCAATACCGTCCTTCTTGTCGGATCGGCACCTAACTTCCCCCACGGCATTGTCGATGATATC
CCAGCTCTTTCGCAACTGGCTACCAAGTACAAGATCCCTCTCCACGTTGACTGCTGCTTGGGATCTTTCGTCGTT
GCATACCTCAAGAAGGCCGGATTCCCCTCGCCCTACGAGGAAGAAGGTGGCTTTGACTTCCGCCAACCAGGCGTG
ACTAGCATCAGTGTTGACACCCACAAGTACGGGTTCGCGCCCAAGGGCAACTCGGTCTTGATCTACCGCAACAAA
TCATACCGAAACAACCAGTACTTCATCTACCCCGATTGGTCCGGCGGTGTTTATGCTTCTCCCTCCGTGGCGGGC
TCCCGCCCTGGCGCTCTGATCGCCGGTTGTTGGGCCAGTCTGATGAGCGTCGGCGAAAACGGATACATCAACAGC
TGCACCGATATCATCAACGCGGCACGGAAGTTCGAGACAGCCGTTCGGACCGATCCAACCATCTCACTGCACATG
GAGATCCTCGGTGACCCCATCGTCAGTGTGGTCGCATTCCGCAGCAAGAATGGTGCCATTGACATTTACGACATC
GCCGATGATCTGTCTGCTAAAGGCTGGCACCTCAACGCTCTGCAATCTCCCCCGGCTATTCACTGTGCTTTCACT
ATTCCAACTGCCAAGGCTGTCGACCAGCTCATTGCTGATCTGCGTGAAGTCATCGGCAAGGAACTTGAGAAAGCC
GAGCAGCGCAAGCGCGAGGGCAAATCATATATCCTCCAGCGTGGCGATACCTCTGCTCTATACGGTGTCGCTGGC
AGCATTCCCGACAAGAGTATCGTCAGCCGTCTGGCAGAAGGCTTCTTGGACACCCTGTACAAAGCCTAA
Transcript >Pro_DTO377G3_2|g7740.t1
ATGAGCTCTTCTATGCTGCCAGTCGCCTTGCAGAACAAGCTGGTTGGCTACGGCCGGGTGTCCAGCGCGCACCTC
TCTGCCTTGAATATCGACCTTATTCGCAACATCATATTTATTCTATTCATCCTTCGGTATACGCGCAAGACCTTC
TACTCCATCCGCGGCTACGGCATCTTCGGCAGCATCCGCAACATCTACATCTCGCTCCGCCTATTCTGCTATGGC
CTCTTCCTGCGTGTCCCTGGTGTCAGCGGGCAGGTCGACAAGCAAGTGAGCACTGCTATCACGAAACTCGAGTCG
AAACTGGTAAACTCTGGGCCGGATGTCACACGGTATCTTACCCTGCCCAAGGAGGGTTGGTCGCCAGAGCAGGTC
CGCGCTGAACTTGATAAGTTGGCTGGGCTTGAACATACACGCTGGGAAGATGGTCGCGTTAGCGGTGCCGTTTAC
CATGGAGGCGCGGAGCTGTTGAAACTCCAGGCTGAAGCATTCGGGCAGTTCGGTGTCGCGAATCCGATTCATCCG
GATGTTTTCCCTGGTGTTCGGAAGATGGAGGCTGAGGTGGTTGCTATGGTTCTTGCTCTCTTCAATGCCCCCTTG
GATGGTGCCGGTGTAACCACTAGCGGTGGTACGGAGTCTATTCTTATGGCTTGCTTGGCCGCCCGGCAAAAGGCT
TTCTTGGAGCGCGGTGTTACTGAGCCCGAGATGATTATTCCCGACACAGCACACGCGGCATTTATCAAGGCATGC
AACTACTTCAAGATCAAGCTGCACCGAGTCCCTTGCCCGGAGCCCGAGTTCAAGGTCGACGTGCATGCTGTTCGC
CGTTTAATCAATCCCAATACCGTCCTTCTTGTCGGATCGGCACCTAACTTCCCCCACGGCATTGTCGATGATATC
CCAGCTCTTTCGCAACTGGCTACCAAGTACAAGATCCCTCTCCACGTTGACTGCTGCTTGGGATCTTTCGTCGTT
GCATACCTCAAGAAGGCCGGATTCCCCTCGCCCTACGAGGAAGAAGGTGGCTTTGACTTCCGCCAACCAGGCGTG
ACTAGCATCAGTGTTGACACCCACAAGTACGGGTTCGCGCCCAAGGGCAACTCGGTCTTGATCTACCGCAACAAA
TCATACCGAAACAACCAGTACTTCATCTACCCCGATTGGTCCGGCGGTGTTTATGCTTCTCCCTCCGTGGCGGGC
TCCCGCCCTGGCGCTCTGATCGCCGGTTGTTGGGCCAGTCTGATGAGCGTCGGCGAAAACGGATACATCAACAGC
TGCACCGATATCATCAACGCGGCACGGAAGTTCGAGACAGCCGTTCGGACCGATCCAACCATCTCACTGCACATG
GAGATCCTCGGTGACCCCATCGTCAGTGTGGTCGCATTCCGCAGCAAGAATGGTGCCATTGACATTTACGACATC
GCCGATGATCTGTCTGCTAAAGGCTGGCACCTCAACGCTCTGCAATCTCCCCCGGCTATTCACTGTGCTTTCACT
ATTCCAACTGCCAAGGCTGTCGACCAGCTCATTGCTGATCTGCGTGAAGTCATCGGCAAGGAACTTGAGAAAGCC
GAGCAGCGCAAGCGCGAGGGCAAATCATATATCCTCCAGCGTGGCGATACCTCTGCTCTATACGGTGTCGCTGGC
AGCATTCCCGACAAGAGTATCGTCAGCCGTCTGGCAGAAGGCTTCTTGGACACCCTGTACAAAGCCTAA
Gene >Pro_DTO377G3_2|g7740.t1
ATGAGCTCTTCTATGCTGCCAGTCGCCTTGCAGAACAAGCTGGTTGGCTACGGCCGGGTGTCCAGCGCGCACCTC
TCTGCCTTGAATATCGACCTGTAAGTTGAATAATCCCCCGTTCCCCGCGCAATCAAGGAACGAAAGACATAAACG
CAATCACCACTGACGCATTTTGCTCTCGATCCAGTATTCGCAACATCATATTTATTCTATTCATCCTTCGGTATA
CGCGCAAGACCTTCTACTCCATCCGCGGCTACGGCATCTTCGGCAGCATCCGCAACATCTACATCTCGCTCCGCC
TATTCTGCTATGGCCTCTTCCTGCGTGTCCCTGGTGTCAGCGGGCAGGTCGACAAGCAAGTGAGCACTGCTATCA
CGAAACTCGAGTCGAAACTGGTAAACTCTGGGCCGGATGTCACACGGTATCTTACCCTGCCCAAGGAGGGTTGGT
CGCCAGAGCAGGTCCGCGCTGAACTTGATAAGTTGGCTGGGCTTGAACATACACGCTGGGAAGATGGTCGCGTTA
GCGGTGCCGTTTACCATGGAGGCGCGGAGCTGTTGAAACTCCAGGCTGAAGCATTCGGGCAGTTCGGTGTCGCGA
ATCCGATTCATCCGGATGTTTTCCCTGGTGTTCGGAAGATGGAGGCTGAGGTGGTTGCTATGGTATGTATGACAT
TCTATATCGAGAGTATCGTATTTGGTGGAGCCTTTCGGCTGATGTCTGCTCTAGGTTCTTGCTCTCTTCAATGCC
CCCTTGGATGGTGCCGGTGTAACCACTAGCGGTGGTACGGAGTCTATTCTTATGGCTTGCTTGGCCGCCCGGCAA
AAGGCTTTCTTGGAGCGCGGTGTTACTGAGCCCGAGATGTAAGTTGGCATGGGGATACTATACCATTGACCAGCA
GGACTGATCGATCATCGTAGGATTATTCCCGACACAGCACACGCGGCATTTATCAAGGCATGCAACTACTTCAAG
ATCAAGCTGCACCGAGTCCCTTGCCCGGAGCCCGAGTTCAAGGTCGACGTGCATGCTGTTCGCCGTTTAATCAAT
CCCAATACCGTCCTTCTTGTCGGATCGGCACCTAACTTCCCCCACGGCATTGTCGATGATATCCCAGCTCTTTCG
CAACTGGCTACCAAGTACAAGATCCCTCTCCACGTTGACTGCTGCTTGGGATCTTTCGTCGTTGCATACCTCAAG
AAGGCCGGATTCCCCTCGCCCTACGAGGAAGAAGGTGGCTTTGACTTCCGCCAACCAGGCGTGACTAGCATCAGT
GTTGACACCCACAAGTACGGGTTCGCGCCCAAGGGCAACTCGGTCTTGATCTACCGCAACAAATCATACCGAAAC
AACCAGTACTTCATCTACCCCGATTGGTCCGGCGGTGTTTATGCTTCTCCCTCCGTGGCGGGCTCCCGCCCTGGC
GCTCTGATCGCCGGTTGTTGGGCCAGTCTGATGAGCGTCGGCGAAAACGGATACATCAACAGCTGCACCGATATC
ATCAACGCGGCACGGAAGTTCGAGACAGCCGTTCGGACCGATCCAACCATCTCACTGCACATGGAGATCCTCGGT
GACCCCATCGTCAGTGTGGTCGCATTCCGCAGCAAGAATGGTGCCATTGACATTTACGACATCGCCGATGATCTG
TCTGCTAAAGGCTGGCACCTCAACGCTCTGCAATCTCCCCCGGCTATTCACTGTGCTTTCACTATTCCAACTGCC
AAGGCTGTCGACCAGCTCATTGCTGATCTGCGTGAAGTCATCGGCAAGGAACTTGAGAAAGCCGAGCAGCGCAAG
CGCGAGGGCAAATCATATATCCTCCAGCGTGGCGATACCTCTGCTCTATACGGTGTCGCTGGCAGCATTCCCGAC
AAGAGTATCGTCAGCCGTCTGGCAGAAGGCTTCTTGGACACCCTGTACAAAGCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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