© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g7736.t1 |
| Gene name | |
| Location | scaffold_25:270280..270985 |
| Strand | - |
| Gene length (bp) | 705 |
| Transcript length (bp) | 630 |
| Coding sequence length (bp) | 630 |
| Protein length (aa) | 210 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01981 | PTH2 | Peptidyl-tRNA hydrolase PTH2 | 2.0E-41 | 94 | 209 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004045 | aminoacyl-tRNA hydrolase activity | Yes |
| GO:0140640 | catalytic activity, acting on a nucleic acid | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0140098 | catalytic activity, acting on RNA | No |
| GO:0140101 | catalytic activity, acting on a tRNA | No |
| GO:0052689 | carboxylic ester hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g7736.t1 MAAPVPLDRIPPTTAAYVIATAIIAGVTGYFIGQGSSISLFKEKEGWPNSYDVKVHSHSSDEEDESDSEEGETDE EDEGNGEELSSFKDNSEEVKLVLVVRMDLGMTKGKIAAQCGHATLACYKYFLEYAPESPILRKWERGGQAKIALQ VKSEDELLVMQAQAISLGLCARVIQDAGRTQIASGSKTVLGILGPRSVVDGVTGHLKLL* |
| Coding | >Pro_DTO377G3_2|g7736.t1 ATGGCCGCACCAGTACCGCTAGATCGCATACCCCCCACGACGGCCGCCTATGTGATTGCAACAGCCATCATTGCA GGCGTGACCGGATATTTCATCGGCCAAGGCTCCTCAATCAGCCTCTTCAAAGAAAAGGAAGGGTGGCCAAACAGC TACGATGTGAAGGTCCACAGCCATTCCTCCGACGAGGAGGACGAATCAGACTCTGAAGAAGGAGAGACCGACGAG GAAGATGAGGGCAACGGCGAAGAACTGTCGAGCTTCAAGGACAACAGCGAGGAGGTGAAGCTGGTGCTCGTCGTT CGCATGGACCTAGGCATGACCAAAGGCAAAATCGCCGCTCAATGCGGCCACGCTACCCTTGCTTGCTACAAATAC TTCCTCGAATACGCACCTGAGTCGCCTATCCTCAGAAAATGGGAGCGCGGTGGCCAGGCCAAGATCGCATTGCAG GTTAAGTCCGAGGATGAGCTGCTAGTGATGCAGGCTCAGGCTATTAGCCTTGGACTTTGCGCGCGCGTTATTCAG GATGCTGGGCGCACTCAAATTGCAAGTGGCAGCAAGACCGTGCTGGGAATCTTGGGACCCAGGAGCGTGGTGGAC GGGGTGACGGGACACTTGAAGCTGTTGTAA |
| Transcript | >Pro_DTO377G3_2|g7736.t1 ATGGCCGCACCAGTACCGCTAGATCGCATACCCCCCACGACGGCCGCCTATGTGATTGCAACAGCCATCATTGCA GGCGTGACCGGATATTTCATCGGCCAAGGCTCCTCAATCAGCCTCTTCAAAGAAAAGGAAGGGTGGCCAAACAGC TACGATGTGAAGGTCCACAGCCATTCCTCCGACGAGGAGGACGAATCAGACTCTGAAGAAGGAGAGACCGACGAG GAAGATGAGGGCAACGGCGAAGAACTGTCGAGCTTCAAGGACAACAGCGAGGAGGTGAAGCTGGTGCTCGTCGTT CGCATGGACCTAGGCATGACCAAAGGCAAAATCGCCGCTCAATGCGGCCACGCTACCCTTGCTTGCTACAAATAC TTCCTCGAATACGCACCTGAGTCGCCTATCCTCAGAAAATGGGAGCGCGGTGGCCAGGCCAAGATCGCATTGCAG GTTAAGTCCGAGGATGAGCTGCTAGTGATGCAGGCTCAGGCTATTAGCCTTGGACTTTGCGCGCGCGTTATTCAG GATGCTGGGCGCACTCAAATTGCAAGTGGCAGCAAGACCGTGCTGGGAATCTTGGGACCCAGGAGCGTGGTGGAC GGGGTGACGGGACACTTGAAGCTGTTGTAA |
| Gene | >Pro_DTO377G3_2|g7736.t1 ATGGCCGCACCAGTACCGCTAGATCGCATACCCCCCACGACGGCCGCCTATGTGATTGCAACAGCCATCATTGCA GGCGTGACCGGATATTTCATCGGCCAAGGCTCCTCAATCAGCCTCTTCAAAGAAAAGGAAGGGTGGCCAAACAGC TACGATGTGAAGGTCCACAGCCATTCCTCCGACGAGGAGGACGAATCAGACTCTGAAGAAGGAGAGACCGACGAG GAAGATGAGGGCAACGGCGAAGAACTGTCGAGCTTCAAGGACAACAGCGAGGAGGTGAAGCTGGTGCTCGTCGTT CGCATGGACCTAGGCATGACCAAAGGTATGTGTTCTTCGCGCAACGTTTCAATTATTCCTCACATTTGTGTTGCA AGCGCTTACAATCTCTTCCTTCTAGGCAAAATCGCCGCTCAATGCGGCCACGCTACCCTTGCTTGCTACAAATAC TTCCTCGAATACGCACCTGAGTCGCCTATCCTCAGAAAATGGGAGCGCGGTGGCCAGGCCAAGATCGCATTGCAG GTTAAGTCCGAGGATGAGCTGCTAGTGATGCAGGCTCAGGCTATTAGCCTTGGACTTTGCGCGCGCGTTATTCAG GATGCTGGGCGCACTCAAATTGCAAGTGGCAGCAAGACCGTGCTGGGAATCTTGGGACCCAGGAGCGTGGTGGAC GGGGTGACGGGACACTTGAAGCTGTTGTAA |