Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g7735.t1
Gene name
Location	scaffold_25:267520..269533
Strand	-
Gene length (bp)	2013
Transcript length (bp)	2013
Coding sequence length (bp)	2013
Protein length (aa)	671

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03343	SART-1	SART-1 family	3.6E-175	75	634
PF19252	HIND	HIND motif	4.3E-06	3	25

GO

GO Term	Description	Terminal node
GO:0046540	U4/U6 x U5 tri-snRNP complex	Yes
GO:0000398	mRNA splicing, via spliceosome	Yes
GO:0008380	RNA splicing	No
GO:0043170	macromolecule metabolic process	No
GO:0140513	nuclear protein-containing complex	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0016070	RNA metabolic process	No
GO:0008150	biological_process	No
GO:0006396	RNA processing	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0005575	cellular_component	No
GO:0016071	mRNA metabolic process	No
GO:0000375	RNA splicing, via transesterification reactions	No
GO:0030532	small nuclear ribonucleoprotein complex	No
GO:0008152	metabolic process	No
GO:0120114	Sm-like protein family complex	No
GO:0032991	protein-containing complex	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0046483	heterocycle metabolic process	No
GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	No
GO:0006807	nitrogen compound metabolic process	No
GO:0097526	spliceosomal tri-snRNP complex	No
GO:0097525	spliceosomal snRNP complex	No
GO:1990904	ribonucleoprotein complex	No
GO:0006397	mRNA processing	No
GO:0090304	nucleic acid metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0009987	cellular process	No
GO:0044238	primary metabolic process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 46	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
SART1

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g7735.t1 MADALSIEQNNKIRVALGLKPLPVPGAGPEFREDDDSESGEEEDPASTLESRQAKSYENWKKIQDTTEAKRKRDE KNAAIKRARDIAQRNIQLQGSTLGEANGDELDTKAWLSQSKKRQKKIEKERAQRLAEELEERERLAEAEYTAADL AGIKVGHSAGAFDGGEDHILTLKDAAVDDEEEDDELQNLDLVEKERTEERLELKKKKPVYDPTAENQGLLSQYDE EIDGKKRKRFTLDAQGSTEEREAKRQEVSNQLRKNIISLDFEPEVPSSDYMDISEVKIKKPKKKKAKATKQRTLM DEDDVAPVADSTDTQGYSAMDIDSKGGVPVSAPRKAINEDVSFVDDDDLQASLALQRRAAFKKRKKISPEELAKQ LREEETQTPMDIENSDNEGEGPGLVIDETSEFVANLHKPTLLEQEEKHATTAAKERESSNAEPEGEGVEIDMDRY GDIEDEEELAARIERDEVSPAQPPQLTGTGLEEESTLDHGLAATLSMLKSRGLVKDNDSTSQNALMRDRQRFLAD KSNRESEIERRARQQRERDRTSGKLDRMSAREREEHARWENKHRDQQEARHIAEVFNREYKPDVQLRYVDEFGRN MNQKEAFKQLSHQFHGKGSGKMKTEKRLKKIDEEKKRESMSTLDSSQNTGMNTAVGTAARKNRQAGVRLG*
Coding	>Pro_DTO377G3_2\|g7735.t1 ATGGCGGACGCTCTATCCATCGAGCAAAACAACAAGATTCGAGTGGCTCTTGGCCTCAAGCCACTCCCAGTTCCT GGTGCCGGCCCAGAATTCAGAGAAGACGACGACAGCGAGTCCGGCGAGGAAGAAGACCCAGCCAGCACTCTCGAG TCGCGACAGGCGAAAAGTTATGAAAATTGGAAGAAGATCCAGGACACCACCGAAGCGAAACGGAAACGAGATGAG AAGAATGCCGCCATCAAGCGGGCGCGTGACATTGCCCAACGCAATATACAACTCCAAGGATCGACACTAGGCGAG GCGAATGGCGACGAACTCGATACCAAAGCCTGGCTGTCACAATCCAAAAAGCGCCAAAAGAAAATCGAGAAAGAA CGCGCCCAGAGACTTGCCGAGGAACTCGAAGAGCGGGAGCGCCTTGCAGAAGCCGAGTACACTGCAGCGGATTTG GCTGGTATCAAGGTCGGACACTCTGCGGGTGCTTTCGATGGTGGTGAAGATCACATCCTGACGCTTAAGGACGCA GCGGTGGATGATGAGGAAGAGGACGATGAGCTCCAAAACCTCGATTTGGTCGAGAAGGAAAGAACCGAAGAGAGG CTGGAGCTTAAGAAGAAAAAGCCTGTCTACGATCCCACGGCGGAGAACCAGGGTCTCCTTTCACAATACGACGAG GAGATCGATGGCAAAAAGCGAAAGAGATTTACACTCGACGCCCAAGGCTCAACCGAAGAACGCGAAGCAAAGCGA CAGGAAGTTTCCAACCAGTTGCGGAAGAACATTATCAGCCTCGACTTTGAACCGGAAGTGCCATCATCCGATTAC ATGGACATCAGCGAAGTCAAAATTAAGAAGCCTAAGAAGAAGAAGGCCAAAGCTACAAAACAGAGGACTTTGATG GACGAGGATGACGTTGCTCCGGTTGCGGATTCGACCGATACACAAGGATATTCAGCTATGGATATTGATTCGAAG GGTGGAGTCCCAGTCTCTGCTCCCCGCAAGGCCATAAACGAAGATGTTTCTTTCGTGGATGACGATGACCTTCAA GCCTCTCTTGCGTTGCAACGACGAGCAGCATTCAAGAAGCGCAAGAAGATCAGCCCTGAGGAGCTTGCTAAGCAG CTTCGAGAAGAGGAGACTCAGACCCCGATGGATATTGAAAATTCGGATAACGAGGGCGAGGGGCCTGGCCTTGTT ATCGACGAAACCTCAGAATTTGTGGCAAATCTACACAAGCCTACACTTCTGGAGCAAGAAGAAAAACACGCTACA ACCGCGGCCAAAGAGCGCGAAAGTTCCAACGCGGAGCCCGAAGGTGAGGGCGTCGAGATCGATATGGACCGTTAC GGCGATATCGAAGACGAAGAGGAACTTGCTGCGCGCATCGAGCGCGATGAAGTATCTCCGGCCCAGCCACCACAA CTTACCGGCACCGGCCTAGAAGAGGAATCAACTCTAGACCATGGTCTTGCTGCTACTCTATCAATGTTGAAATCG CGCGGTCTCGTCAAAGACAACGACAGCACCAGCCAAAACGCTCTCATGCGTGATCGCCAGCGTTTCTTGGCCGAC AAGTCGAACCGCGAGTCCGAAATCGAGCGACGCGCCCGACAGCAGCGTGAGCGGGACCGTACCTCTGGTAAGCTT GATCGCATGTCAGCCCGCGAGCGCGAGGAGCACGCGCGCTGGGAGAACAAGCATCGTGACCAGCAGGAAGCACGT CATATCGCCGAGGTATTCAACCGCGAATACAAGCCCGACGTGCAACTGCGGTATGTGGATGAGTTCGGTCGCAAC ATGAACCAGAAGGAAGCATTCAAGCAACTTAGTCACCAGTTCCACGGCAAGGGCAGTGGAAAGATGAAGACCGAG AAGCGCCTCAAGAAGATCGACGAAGAGAAGAAGCGCGAGTCTATGAGCACGCTGGACAGCAGCCAGAACACTGGC ATGAACACTGCTGTGGGCACTGCTGCGCGCAAGAATCGCCAGGCTGGGGTTCGCCTGGGCTGA
Transcript	>Pro_DTO377G3_2\|g7735.t1 ATGGCGGACGCTCTATCCATCGAGCAAAACAACAAGATTCGAGTGGCTCTTGGCCTCAAGCCACTCCCAGTTCCT GGTGCCGGCCCAGAATTCAGAGAAGACGACGACAGCGAGTCCGGCGAGGAAGAAGACCCAGCCAGCACTCTCGAG TCGCGACAGGCGAAAAGTTATGAAAATTGGAAGAAGATCCAGGACACCACCGAAGCGAAACGGAAACGAGATGAG AAGAATGCCGCCATCAAGCGGGCGCGTGACATTGCCCAACGCAATATACAACTCCAAGGATCGACACTAGGCGAG GCGAATGGCGACGAACTCGATACCAAAGCCTGGCTGTCACAATCCAAAAAGCGCCAAAAGAAAATCGAGAAAGAA CGCGCCCAGAGACTTGCCGAGGAACTCGAAGAGCGGGAGCGCCTTGCAGAAGCCGAGTACACTGCAGCGGATTTG GCTGGTATCAAGGTCGGACACTCTGCGGGTGCTTTCGATGGTGGTGAAGATCACATCCTGACGCTTAAGGACGCA GCGGTGGATGATGAGGAAGAGGACGATGAGCTCCAAAACCTCGATTTGGTCGAGAAGGAAAGAACCGAAGAGAGG CTGGAGCTTAAGAAGAAAAAGCCTGTCTACGATCCCACGGCGGAGAACCAGGGTCTCCTTTCACAATACGACGAG GAGATCGATGGCAAAAAGCGAAAGAGATTTACACTCGACGCCCAAGGCTCAACCGAAGAACGCGAAGCAAAGCGA CAGGAAGTTTCCAACCAGTTGCGGAAGAACATTATCAGCCTCGACTTTGAACCGGAAGTGCCATCATCCGATTAC ATGGACATCAGCGAAGTCAAAATTAAGAAGCCTAAGAAGAAGAAGGCCAAAGCTACAAAACAGAGGACTTTGATG GACGAGGATGACGTTGCTCCGGTTGCGGATTCGACCGATACACAAGGATATTCAGCTATGGATATTGATTCGAAG GGTGGAGTCCCAGTCTCTGCTCCCCGCAAGGCCATAAACGAAGATGTTTCTTTCGTGGATGACGATGACCTTCAA GCCTCTCTTGCGTTGCAACGACGAGCAGCATTCAAGAAGCGCAAGAAGATCAGCCCTGAGGAGCTTGCTAAGCAG CTTCGAGAAGAGGAGACTCAGACCCCGATGGATATTGAAAATTCGGATAACGAGGGCGAGGGGCCTGGCCTTGTT ATCGACGAAACCTCAGAATTTGTGGCAAATCTACACAAGCCTACACTTCTGGAGCAAGAAGAAAAACACGCTACA ACCGCGGCCAAAGAGCGCGAAAGTTCCAACGCGGAGCCCGAAGGTGAGGGCGTCGAGATCGATATGGACCGTTAC GGCGATATCGAAGACGAAGAGGAACTTGCTGCGCGCATCGAGCGCGATGAAGTATCTCCGGCCCAGCCACCACAA CTTACCGGCACCGGCCTAGAAGAGGAATCAACTCTAGACCATGGTCTTGCTGCTACTCTATCAATGTTGAAATCG CGCGGTCTCGTCAAAGACAACGACAGCACCAGCCAAAACGCTCTCATGCGTGATCGCCAGCGTTTCTTGGCCGAC AAGTCGAACCGCGAGTCCGAAATCGAGCGACGCGCCCGACAGCAGCGTGAGCGGGACCGTACCTCTGGTAAGCTT GATCGCATGTCAGCCCGCGAGCGCGAGGAGCACGCGCGCTGGGAGAACAAGCATCGTGACCAGCAGGAAGCACGT CATATCGCCGAGGTATTCAACCGCGAATACAAGCCCGACGTGCAACTGCGGTATGTGGATGAGTTCGGTCGCAAC ATGAACCAGAAGGAAGCATTCAAGCAACTTAGTCACCAGTTCCACGGCAAGGGCAGTGGAAAGATGAAGACCGAG AAGCGCCTCAAGAAGATCGACGAAGAGAAGAAGCGCGAGTCTATGAGCACGCTGGACAGCAGCCAGAACACTGGC ATGAACACTGCTGTGGGCACTGCTGCGCGCAAGAATCGCCAGGCTGGGGTTCGCCTGGGCTGA
Gene	>Pro_DTO377G3_2\|g7735.t1 ATGGCGGACGCTCTATCCATCGAGCAAAACAACAAGATTCGAGTGGCTCTTGGCCTCAAGCCACTCCCAGTTCCT GGTGCCGGCCCAGAATTCAGAGAAGACGACGACAGCGAGTCCGGCGAGGAAGAAGACCCAGCCAGCACTCTCGAG TCGCGACAGGCGAAAAGTTATGAAAATTGGAAGAAGATCCAGGACACCACCGAAGCGAAACGGAAACGAGATGAG AAGAATGCCGCCATCAAGCGGGCGCGTGACATTGCCCAACGCAATATACAACTCCAAGGATCGACACTAGGCGAG GCGAATGGCGACGAACTCGATACCAAAGCCTGGCTGTCACAATCCAAAAAGCGCCAAAAGAAAATCGAGAAAGAA CGCGCCCAGAGACTTGCCGAGGAACTCGAAGAGCGGGAGCGCCTTGCAGAAGCCGAGTACACTGCAGCGGATTTG GCTGGTATCAAGGTCGGACACTCTGCGGGTGCTTTCGATGGTGGTGAAGATCACATCCTGACGCTTAAGGACGCA GCGGTGGATGATGAGGAAGAGGACGATGAGCTCCAAAACCTCGATTTGGTCGAGAAGGAAAGAACCGAAGAGAGG CTGGAGCTTAAGAAGAAAAAGCCTGTCTACGATCCCACGGCGGAGAACCAGGGTCTCCTTTCACAATACGACGAG GAGATCGATGGCAAAAAGCGAAAGAGATTTACACTCGACGCCCAAGGCTCAACCGAAGAACGCGAAGCAAAGCGA CAGGAAGTTTCCAACCAGTTGCGGAAGAACATTATCAGCCTCGACTTTGAACCGGAAGTGCCATCATCCGATTAC ATGGACATCAGCGAAGTCAAAATTAAGAAGCCTAAGAAGAAGAAGGCCAAAGCTACAAAACAGAGGACTTTGATG GACGAGGATGACGTTGCTCCGGTTGCGGATTCGACCGATACACAAGGATATTCAGCTATGGATATTGATTCGAAG GGTGGAGTCCCAGTCTCTGCTCCCCGCAAGGCCATAAACGAAGATGTTTCTTTCGTGGATGACGATGACCTTCAA GCCTCTCTTGCGTTGCAACGACGAGCAGCATTCAAGAAGCGCAAGAAGATCAGCCCTGAGGAGCTTGCTAAGCAG CTTCGAGAAGAGGAGACTCAGACCCCGATGGATATTGAAAATTCGGATAACGAGGGCGAGGGGCCTGGCCTTGTT ATCGACGAAACCTCAGAATTTGTGGCAAATCTACACAAGCCTACACTTCTGGAGCAAGAAGAAAAACACGCTACA ACCGCGGCCAAAGAGCGCGAAAGTTCCAACGCGGAGCCCGAAGGTGAGGGCGTCGAGATCGATATGGACCGTTAC GGCGATATCGAAGACGAAGAGGAACTTGCTGCGCGCATCGAGCGCGATGAAGTATCTCCGGCCCAGCCACCACAA CTTACCGGCACCGGCCTAGAAGAGGAATCAACTCTAGACCATGGTCTTGCTGCTACTCTATCAATGTTGAAATCG CGCGGTCTCGTCAAAGACAACGACAGCACCAGCCAAAACGCTCTCATGCGTGATCGCCAGCGTTTCTTGGCCGAC AAGTCGAACCGCGAGTCCGAAATCGAGCGACGCGCCCGACAGCAGCGTGAGCGGGACCGTACCTCTGGTAAGCTT GATCGCATGTCAGCCCGCGAGCGCGAGGAGCACGCGCGCTGGGAGAACAAGCATCGTGACCAGCAGGAAGCACGT CATATCGCCGAGGTATTCAACCGCGAATACAAGCCCGACGTGCAACTGCGGTATGTGGATGAGTTCGGTCGCAAC ATGAACCAGAAGGAAGCATTCAAGCAACTTAGTCACCAGTTCCACGGCAAGGGCAGTGGAAAGATGAAGACCGAG AAGCGCCTCAAGAAGATCGACGAAGAGAAGAAGCGCGAGTCTATGAGCACGCTGGACAGCAGCCAGAACACTGGC ATGAACACTGCTGTGGGCACTGCTGCGCGCAAGAATCGCCAGGCTGGGGTTCGCCTGGGCTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences