Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7727.t1
Gene name
Locationscaffold_25:250045..250982
Strand-
Gene length (bp)937
Transcript length (bp)780
Coding sequence length (bp)780
Protein length (aa) 260

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13419 HAD_2 Haloacid dehalogenase-like hydrolase 5.0E-07 143 199
PF13242 Hydrolase_like HAD-hyrolase-like 4.9E-05 146 199

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7727.t1
MAPPNPDFPAVRACIFDMDGLLINSEDIISLSTNQLLERLDKWRYIPPLGQVTYLPREIARESSEGMRLFFPDCR
PLPGAEKILSNLSRARSASSGDVIQLALASSTKTRSYELKTAGPESKLLLSFFRSDRRILGDDPRMRRGRGKPAP
DIYLLALQSLNSGIDSEEKAILPNECLVFEDSIAGVEAGRRAGMRVVWVPHPDVAVEYQPMHKDILAGRSGRFKV
GDDWQLGEIDDGWAESIPSLEDFDYEKYGLDVAF*
Coding >Pro_DTO377G3_2|g7727.t1
ATGGCTCCCCCTAATCCAGACTTCCCCGCAGTCCGCGCCTGCATTTTCGACATGGACGGGCTCCTCATCAACTCT
GAAGACATAATCAGTCTATCCACGAACCAACTGCTGGAAAGACTCGACAAATGGCGATATATTCCACCACTGGGC
CAAGTTACCTATCTCCCGCGAGAAATTGCCCGTGAATCAAGCGAGGGCATGCGACTATTTTTCCCGGATTGCAGG
CCGTTGCCTGGCGCGGAGAAGATTCTATCGAATCTAAGCCGTGCACGGAGTGCTTCGTCTGGGGACGTGATTCAG
CTGGCTTTGGCTTCCAGCACCAAGACCCGTAGTTATGAGTTGAAAACTGCGGGGCCGGAATCGAAACTACTGTTG
AGCTTCTTTCGGTCGGACAGGAGAATCCTGGGTGATGATCCACGAATGCGACGGGGTCGAGGGAAGCCAGCGCCC
GATATTTATTTGCTCGCGTTGCAGTCTTTGAACTCGGGAATAGACTCTGAGGAAAAGGCTATCCTGCCCAATGAA
TGTTTAGTCTTCGAGGATAGCATCGCTGGTGTAGAGGCTGGGAGACGCGCTGGTATGAGAGTTGTTTGGGTACCG
CATCCAGATGTGGCGGTCGAGTATCAGCCGATGCATAAAGATATCCTGGCTGGGAGATCAGGAAGATTTAAGGTC
GGAGATGACTGGCAGCTAGGAGAGATTGATGATGGCTGGGCAGAAAGTATACCTAGTCTGGAAGACTTTGATTAC
GAGAAGTACGGCCTCGATGTGGCATTTTAA
Transcript >Pro_DTO377G3_2|g7727.t1
ATGGCTCCCCCTAATCCAGACTTCCCCGCAGTCCGCGCCTGCATTTTCGACATGGACGGGCTCCTCATCAACTCT
GAAGACATAATCAGTCTATCCACGAACCAACTGCTGGAAAGACTCGACAAATGGCGATATATTCCACCACTGGGC
CAAGTTACCTATCTCCCGCGAGAAATTGCCCGTGAATCAAGCGAGGGCATGCGACTATTTTTCCCGGATTGCAGG
CCGTTGCCTGGCGCGGAGAAGATTCTATCGAATCTAAGCCGTGCACGGAGTGCTTCGTCTGGGGACGTGATTCAG
CTGGCTTTGGCTTCCAGCACCAAGACCCGTAGTTATGAGTTGAAAACTGCGGGGCCGGAATCGAAACTACTGTTG
AGCTTCTTTCGGTCGGACAGGAGAATCCTGGGTGATGATCCACGAATGCGACGGGGTCGAGGGAAGCCAGCGCCC
GATATTTATTTGCTCGCGTTGCAGTCTTTGAACTCGGGAATAGACTCTGAGGAAAAGGCTATCCTGCCCAATGAA
TGTTTAGTCTTCGAGGATAGCATCGCTGGTGTAGAGGCTGGGAGACGCGCTGGTATGAGAGTTGTTTGGGTACCG
CATCCAGATGTGGCGGTCGAGTATCAGCCGATGCATAAAGATATCCTGGCTGGGAGATCAGGAAGATTTAAGGTC
GGAGATGACTGGCAGCTAGGAGAGATTGATGATGGCTGGGCAGAAAGTATACCTAGTCTGGAAGACTTTGATTAC
GAGAAGTACGGCCTCGATGTGGCATTTTAA
Gene >Pro_DTO377G3_2|g7727.t1
ATGGCTCCCCCTAATCCAGAGTGAGTGACCTCGAACATGTGCATCTATATACGACAATTAGCGGAGGCATTAAAG
TCAACATACGAATTCTGTAATCCGCGAAGCTAACACAGACCACCAGCTTCCCCGCAGTCCGCGCCTGCATTTTCG
ACATGGACGGGCTCCTCATCAACTCTGAAGACATAATCAGTCTATCCACGAACCAACTGCTGGAAAGGTACGGAA
GGCCTCCGTTGACTCCGTCGATTCGAGCCCAGCTCATGGGTGTCGCAGACTCGACAAATGGCGATATATTCCACC
ACTGGGCCAAGTTACCTATCTCCCGCGAGAAATTGCCCGTGAATCAAGCGAGGGCATGCGACTATTTTTCCCGGA
TTGCAGGCCGTTGCCTGGCGCGGAGAAGATTCTATCGAATCTAAGCCGTGCACGGAGTGCTTCGTCTGGGGACGT
GATTCAGCTGGCTTTGGCTTCCAGCACCAAGACCCGTAGTTATGAGTTGAAAACTGCGGGGCCGGAATCGAAACT
ACTGTTGAGCTTCTTTCGGTCGGACAGGAGAATCCTGGGTGATGATCCACGAATGCGACGGGGTCGAGGGAAGCC
AGCGCCCGATATTTATTTGCTCGCGTTGCAGTCTTTGAACTCGGGAATAGACTCTGAGGAAAAGGCTATCCTGCC
CAATGAATGTTTAGTCTTCGAGGATAGCATCGCTGGTGTAGAGGCTGGGAGACGCGCTGGTATGAGAGTTGTTTG
GGTACCGCATCCAGATGTGGCGGTCGAGTATCAGCCGATGCATAAAGATATCCTGGCTGGGAGATCAGGAAGATT
TAAGGTCGGAGATGACTGGCAGCTAGGAGAGATTGATGATGGCTGGGCAGAAAGTATACCTAGTCTGGAAGACTT
TGATTACGAGAAGTACGGCCTCGATGTGGCATTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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