Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7718.t1
Gene name
Locationscaffold_25:219945..220682
Strand-
Gene length (bp)737
Transcript length (bp)621
Coding sequence length (bp)621
Protein length (aa) 207

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 2.4E-37 5 202
PF00106 adh_short short chain dehydrogenase 3.1E-31 2 151

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7718.t1
MIDEFTNQGRKCCAIQADLSSGTCGESIVRQALQGLGVGTIELLINNAAIAQTPASVEEPLDQDEFERIMHINVR
APILLVQALLPHLGPHGNRIINISSIGSRLNFPGYGVYSASKAALESLTRTWARELAVKNHLTCNAVLVGPTATP
DAPDSDARAAAKGLATAERRLGTPRDVADVVAWLSGEGSRWVNGDLIGSNGGAFMS*
Coding >Pro_DTO377G3_2|g7718.t1
ATGATCGACGAGTTTACAAACCAAGGTCGGAAATGCTGCGCAATTCAAGCCGATCTATCATCGGGAACCTGTGGA
GAATCAATTGTCAGACAGGCTCTTCAAGGCCTTGGGGTTGGGACCATCGAACTCTTGATCAACAATGCGGCCATT
GCTCAAACACCCGCCAGCGTTGAAGAACCGTTGGATCAAGATGAATTTGAGAGGATCATGCACATCAACGTACGA
GCTCCTATCCTTTTGGTCCAGGCATTGCTTCCGCACCTAGGACCGCATGGGAATAGAATCATCAACATTTCCTCA
ATTGGTTCTAGGCTGAATTTTCCAGGATATGGTGTTTATTCAGCAAGCAAGGCCGCTTTGGAGTCTTTGACTCGT
ACATGGGCTCGAGAACTTGCCGTCAAGAATCATCTCACTTGTAATGCCGTTTTGGTAGGACCCACAGCGACACCT
GACGCTCCCGACAGTGATGCGAGGGCCGCTGCCAAGGGTCTTGCTACCGCCGAGCGGAGACTCGGAACACCGAGA
GATGTTGCGGATGTGGTCGCCTGGCTTTCGGGAGAAGGTTCTAGGTGGGTGAATGGGGATTTGATTGGATCTAAC
GGGGGGGCTTTTATGTCATGA
Transcript >Pro_DTO377G3_2|g7718.t1
ATGATCGACGAGTTTACAAACCAAGGTCGGAAATGCTGCGCAATTCAAGCCGATCTATCATCGGGAACCTGTGGA
GAATCAATTGTCAGACAGGCTCTTCAAGGCCTTGGGGTTGGGACCATCGAACTCTTGATCAACAATGCGGCCATT
GCTCAAACACCCGCCAGCGTTGAAGAACCGTTGGATCAAGATGAATTTGAGAGGATCATGCACATCAACGTACGA
GCTCCTATCCTTTTGGTCCAGGCATTGCTTCCGCACCTAGGACCGCATGGGAATAGAATCATCAACATTTCCTCA
ATTGGTTCTAGGCTGAATTTTCCAGGATATGGTGTTTATTCAGCAAGCAAGGCCGCTTTGGAGTCTTTGACTCGT
ACATGGGCTCGAGAACTTGCCGTCAAGAATCATCTCACTTGTAATGCCGTTTTGGTAGGACCCACAGCGACACCT
GACGCTCCCGACAGTGATGCGAGGGCCGCTGCCAAGGGTCTTGCTACCGCCGAGCGGAGACTCGGAACACCGAGA
GATGTTGCGGATGTGGTCGCCTGGCTTTCGGGAGAAGGTTCTAGGTGGGTGAATGGGGATTTGATTGGATCTAAC
GGGGGGGCTTTTATGTCATGA
Gene >Pro_DTO377G3_2|g7718.t1
ATGATCGACGAGTTTACAAACCAAGGTCGGAAATGCTGCGCAATTCAAGCCGATCTATCATCGGGAACCTGTGGA
GAATCAATTGTCAGACAGGCTCTTCAAGGCCTTGGGGTTGGGACCATCGAACTCTTGATCAACAATGCGGCCATT
GCTCAAACACCCGCCAGCGTTGAAGAACCGTTGGATCAAGATGAATTTGAGAGGTAAGCCTTTCCTGTTCACGGC
CTTCGTGGGGATCTAAAGATTGCTAATAAGACTAGGATCATGCACATCAACGTACGAGCTCCTATCCTTTTGGTC
CAGGCATTGCTTCCGCACCTAGGACCGCATGGGAATAGAATCATCAACATGTAAGTAGTTTCGACCTAATTACCT
TCACACCAGCATTGACCATTAACATTCGTTGCAGTTCCTCAATTGGTTCTAGGCTGAATTTTCCAGGATATGGTG
TTTATTCAGCAAGCAAGGCCGCTTTGGAGTCTTTGACTCGTACATGGGCTCGAGAACTTGCCGTCAAGAATCATC
TCACTTGTAATGCCGTTTTGGTAGGACCCACAGCGACACCTGACGCTCCCGACAGTGATGCGAGGGCCGCTGCCA
AGGGTCTTGCTACCGCCGAGCGGAGACTCGGAACACCGAGAGATGTTGCGGATGTGGTCGCCTGGCTTTCGGGAG
AAGGTTCTAGGTGGGTGAATGGGGATTTGATTGGATCTAACGGGGGGGCTTTTATGTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail