Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7718.t1
Gene name
Locationscaffold_25:219945..220682
Strand-
Gene length (bp)737
Transcript length (bp)621
Coding sequence length (bp)621
Protein length (aa) 207

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 8.4E-37 6 202
PF00106 adh_short short chain dehydrogenase 3.3E-31 2 151

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 52 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7718.t1
MIDEFTNQGRKCCAIQADLSSGTCGESIVRQALQGLGVGTIELLINNAAIAQTPASVEEPLDQDEFERIMHINVR
APILLVQALLPHLGPHGNRIINISSIGSRLNFPGYGVYSASKAALESLTRTWARELAVKNHLTCNAVLVGPTATP
DAPDSDARAAAKGLATAERRLGTPRDVADVVAWLSGEGSRWVNGDLIGSNGGAFMS*
Coding >Pro_DTO377G3_2|g7718.t1
ATGATCGACGAGTTTACAAACCAAGGTCGGAAATGCTGCGCAATTCAAGCCGATCTATCATCGGGAACCTGTGGA
GAATCAATTGTCAGACAGGCTCTTCAAGGCCTTGGGGTTGGGACCATCGAACTCTTGATCAACAATGCGGCCATT
GCTCAAACACCCGCCAGCGTTGAAGAACCGTTGGATCAAGATGAATTTGAGAGGATCATGCACATCAACGTACGA
GCTCCTATCCTTTTGGTCCAGGCATTGCTTCCGCACCTAGGACCGCATGGGAATAGAATCATCAACATTTCCTCA
ATTGGTTCTAGGCTGAATTTTCCAGGATATGGTGTTTATTCAGCAAGCAAGGCCGCTTTGGAGTCTTTGACTCGT
ACATGGGCTCGAGAACTTGCCGTCAAGAATCATCTCACTTGTAATGCCGTTTTGGTAGGACCCACAGCGACACCT
GACGCTCCCGACAGTGATGCGAGGGCCGCTGCCAAGGGTCTTGCTACCGCCGAGCGGAGACTCGGAACACCGAGA
GATGTTGCGGATGTGGTCGCCTGGCTTTCGGGAGAAGGTTCTAGGTGGGTGAATGGGGATTTGATTGGATCTAAC
GGGGGGGCTTTTATGTCATGA
Transcript >Pro_DTO377G3_2|g7718.t1
ATGATCGACGAGTTTACAAACCAAGGTCGGAAATGCTGCGCAATTCAAGCCGATCTATCATCGGGAACCTGTGGA
GAATCAATTGTCAGACAGGCTCTTCAAGGCCTTGGGGTTGGGACCATCGAACTCTTGATCAACAATGCGGCCATT
GCTCAAACACCCGCCAGCGTTGAAGAACCGTTGGATCAAGATGAATTTGAGAGGATCATGCACATCAACGTACGA
GCTCCTATCCTTTTGGTCCAGGCATTGCTTCCGCACCTAGGACCGCATGGGAATAGAATCATCAACATTTCCTCA
ATTGGTTCTAGGCTGAATTTTCCAGGATATGGTGTTTATTCAGCAAGCAAGGCCGCTTTGGAGTCTTTGACTCGT
ACATGGGCTCGAGAACTTGCCGTCAAGAATCATCTCACTTGTAATGCCGTTTTGGTAGGACCCACAGCGACACCT
GACGCTCCCGACAGTGATGCGAGGGCCGCTGCCAAGGGTCTTGCTACCGCCGAGCGGAGACTCGGAACACCGAGA
GATGTTGCGGATGTGGTCGCCTGGCTTTCGGGAGAAGGTTCTAGGTGGGTGAATGGGGATTTGATTGGATCTAAC
GGGGGGGCTTTTATGTCATGA
Gene >Pro_DTO377G3_2|g7718.t1
ATGATCGACGAGTTTACAAACCAAGGTCGGAAATGCTGCGCAATTCAAGCCGATCTATCATCGGGAACCTGTGGA
GAATCAATTGTCAGACAGGCTCTTCAAGGCCTTGGGGTTGGGACCATCGAACTCTTGATCAACAATGCGGCCATT
GCTCAAACACCCGCCAGCGTTGAAGAACCGTTGGATCAAGATGAATTTGAGAGGTAAGCCTTTCCTGTTCACGGC
CTTCGTGGGGATCTAAAGATTGCTAATAAGACTAGGATCATGCACATCAACGTACGAGCTCCTATCCTTTTGGTC
CAGGCATTGCTTCCGCACCTAGGACCGCATGGGAATAGAATCATCAACATGTAAGTAGTTTCGACCTAATTACCT
TCACACCAGCATTGACCATTAACATTCGTTGCAGTTCCTCAATTGGTTCTAGGCTGAATTTTCCAGGATATGGTG
TTTATTCAGCAAGCAAGGCCGCTTTGGAGTCTTTGACTCGTACATGGGCTCGAGAACTTGCCGTCAAGAATCATC
TCACTTGTAATGCCGTTTTGGTAGGACCCACAGCGACACCTGACGCTCCCGACAGTGATGCGAGGGCCGCTGCCA
AGGGTCTTGCTACCGCCGAGCGGAGACTCGGAACACCGAGAGATGTTGCGGATGTGGTCGCCTGGCTTTCGGGAG
AAGGTTCTAGGTGGGTGAATGGGGATTTGATTGGATCTAACGGGGGGGCTTTTATGTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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