Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7684.t1
Gene name
Locationscaffold_25:126648..128661
Strand-
Gene length (bp)2013
Transcript length (bp)1488
Coding sequence length (bp)1488
Protein length (aa) 496

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00128 Alpha-amylase Alpha amylase, catalytic domain 8.2E-69 58 359
PF09260 DUF1966 Domain of unknown function (DUF1966) 1.4E-29 404 493

GO

GO Term Description Terminal node
GO:0005509 calcium ion binding Yes
GO:0016052 carbohydrate catabolic process Yes
GO:0004556 alpha-amylase activity Yes
GO:0003824 catalytic activity Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0003674 molecular_function No
GO:0071704 organic substance metabolic process No
GO:1901575 organic substance catabolic process No
GO:0009056 catabolic process No
GO:0005488 binding No
GO:0008152 metabolic process No
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:0016787 hydrolase activity No
GO:0016160 amylase activity No
GO:0044238 primary metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0043167 ion binding No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7684.t1
MVLARFAWLASLISIAIAATPDEWRSRSIYFMLTDRFARTDGSTTATCDTSDRKYCGGTWQGIIDKLDYIQGMGF
TAIWITPVTGQLTEDTAYGYAYHGYWQQDIYALNSNYGTADDLKALATALHERDMYLMVDVVANHMGYDGAGTDV
DYTKFNPFNDAKYFHPYCSIADYSNDTMVQDCWLGDDNVSLPDLDTESTEVQDIWYDWVGSLVSNYSIDGLRVDT
VRHVQKDFWPGYNKAAGVYCVGEVFDGDADYTCPYQEVMDGVLNYPIYYPLLNAFQSTSGSMTDLYNMINTVKST
CKDSTLLGSFVENHDNPRFASVTDDIALAKNAVTFTIMADGIPIVYAGQEQHYNGGEDPANREAVWLSGFNTDSE
LYKLIATANAARNQAIAKSTNYTIYQNYPIYKDDTTIAMRKGFDGGQIITVLSNLGAGGAEYSASIPDTGFAAGE
ELTEVVSCASVTAGDSGEVSVAMAGGEPRILLPTSLLEGSTLCSS*
Coding >Pro_DTO377G3_2|g7684.t1
ATGGTTCTCGCACGATTTGCTTGGCTTGCTAGCTTGATTAGCATTGCCATTGCTGCCACTCCAGATGAATGGCGC
TCACGGTCGATCTACTTCATGCTCACTGATCGATTCGCCCGAACGGATGGTTCAACTACTGCCACCTGTGATACC
AGTGATAGAAAATACTGTGGCGGAACCTGGCAAGGAATTATAGACAAGCTGGACTACATCCAAGGAATGGGCTTC
ACGGCCATTTGGATCACTCCCGTGACTGGCCAATTGACCGAGGATACTGCGTATGGCTATGCCTATCACGGATAC
TGGCAGCAGGACATCTATGCTCTCAACTCGAACTACGGAACTGCAGACGATCTCAAGGCTCTCGCTACGGCTTTG
CATGAACGCGATATGTATCTCATGGTCGATGTAGTAGCAAACCACATGGGCTACGATGGCGCAGGCACTGACGTA
GACTACACCAAATTCAACCCCTTCAACGATGCGAAGTATTTCCACCCCTACTGCTCAATCGCCGATTACAGCAAC
GATACCATGGTGCAAGACTGCTGGCTTGGGGATGACAATGTTTCGCTACCGGATCTGGATACAGAGAGCACCGAG
GTGCAGGACATATGGTATGACTGGGTTGGATCTTTGGTCTCTAACTACTCGATCGACGGTCTCCGCGTTGACACA
GTCAGACACGTCCAGAAAGATTTCTGGCCCGGCTATAATAAAGCCGCCGGCGTCTACTGCGTAGGCGAGGTCTTT
GATGGTGACGCTGATTATACCTGTCCATACCAGGAGGTAATGGACGGAGTGCTCAACTATCCAATTTACTACCCA
CTCCTCAATGCCTTTCAATCGACCTCTGGAAGCATGACCGACCTATACAACATGATAAATACGGTGAAATCGACT
TGCAAGGACTCAACCCTTCTCGGGAGCTTTGTGGAGAATCATGATAACCCTCGTTTTGCCTCCGTCACCGACGAC
ATTGCCCTCGCTAAGAACGCAGTCACATTCACTATCATGGCAGACGGCATTCCTATCGTCTACGCCGGGCAGGAG
CAACACTACAATGGTGGCGAAGACCCAGCTAATCGCGAGGCTGTATGGTTGTCCGGGTTCAACACCGACAGCGAA
CTGTACAAGCTCATTGCAACGGCCAATGCTGCGAGAAACCAGGCGATTGCTAAAAGTACCAACTATACTATTTAC
CAGAACTACCCAATCTACAAAGACGATACCACCATCGCCATGCGGAAGGGCTTTGACGGCGGACAAATAATCACT
GTATTGAGCAATCTCGGTGCAGGAGGTGCAGAGTACTCGGCTTCAATTCCTGATACTGGATTCGCAGCTGGTGAG
GAGTTGACGGAGGTTGTGTCCTGCGCTAGTGTTACTGCCGGTGATAGTGGGGAGGTGTCTGTTGCTATGGCGGGT
GGAGAGCCCAGGATTTTACTGCCTACCTCTTTACTTGAGGGCTCAACTCTGTGTTCGTCGTAG
Transcript >Pro_DTO377G3_2|g7684.t1
ATGGTTCTCGCACGATTTGCTTGGCTTGCTAGCTTGATTAGCATTGCCATTGCTGCCACTCCAGATGAATGGCGC
TCACGGTCGATCTACTTCATGCTCACTGATCGATTCGCCCGAACGGATGGTTCAACTACTGCCACCTGTGATACC
AGTGATAGAAAATACTGTGGCGGAACCTGGCAAGGAATTATAGACAAGCTGGACTACATCCAAGGAATGGGCTTC
ACGGCCATTTGGATCACTCCCGTGACTGGCCAATTGACCGAGGATACTGCGTATGGCTATGCCTATCACGGATAC
TGGCAGCAGGACATCTATGCTCTCAACTCGAACTACGGAACTGCAGACGATCTCAAGGCTCTCGCTACGGCTTTG
CATGAACGCGATATGTATCTCATGGTCGATGTAGTAGCAAACCACATGGGCTACGATGGCGCAGGCACTGACGTA
GACTACACCAAATTCAACCCCTTCAACGATGCGAAGTATTTCCACCCCTACTGCTCAATCGCCGATTACAGCAAC
GATACCATGGTGCAAGACTGCTGGCTTGGGGATGACAATGTTTCGCTACCGGATCTGGATACAGAGAGCACCGAG
GTGCAGGACATATGGTATGACTGGGTTGGATCTTTGGTCTCTAACTACTCGATCGACGGTCTCCGCGTTGACACA
GTCAGACACGTCCAGAAAGATTTCTGGCCCGGCTATAATAAAGCCGCCGGCGTCTACTGCGTAGGCGAGGTCTTT
GATGGTGACGCTGATTATACCTGTCCATACCAGGAGGTAATGGACGGAGTGCTCAACTATCCAATTTACTACCCA
CTCCTCAATGCCTTTCAATCGACCTCTGGAAGCATGACCGACCTATACAACATGATAAATACGGTGAAATCGACT
TGCAAGGACTCAACCCTTCTCGGGAGCTTTGTGGAGAATCATGATAACCCTCGTTTTGCCTCCGTCACCGACGAC
ATTGCCCTCGCTAAGAACGCAGTCACATTCACTATCATGGCAGACGGCATTCCTATCGTCTACGCCGGGCAGGAG
CAACACTACAATGGTGGCGAAGACCCAGCTAATCGCGAGGCTGTATGGTTGTCCGGGTTCAACACCGACAGCGAA
CTGTACAAGCTCATTGCAACGGCCAATGCTGCGAGAAACCAGGCGATTGCTAAAAGTACCAACTATACTATTTAC
CAGAACTACCCAATCTACAAAGACGATACCACCATCGCCATGCGGAAGGGCTTTGACGGCGGACAAATAATCACT
GTATTGAGCAATCTCGGTGCAGGAGGTGCAGAGTACTCGGCTTCAATTCCTGATACTGGATTCGCAGCTGGTGAG
GAGTTGACGGAGGTTGTGTCCTGCGCTAGTGTTACTGCCGGTGATAGTGGGGAGGTGTCTGTTGCTATGGCGGGT
GGAGAGCCCAGGATTTTACTGCCTACCTCTTTACTTGAGGGCTCAACTCTGTGTTCGTCGTAG
Gene >Pro_DTO377G3_2|g7684.t1
ATGGTTCTCGCACGATTTGCTTGGCTTGCTAGCTTGATTAGCATTGCCATTGCTGCCACTCCAGATGAATGGCGC
TCACGGTCGATCTACTTCATGCTCACTGATCGATTCGCCCGAACGGATGGTTCAACTACTGCCACCTGTGATACC
AGTGATAGAGTCGGTTTCTGTCTATATATCGGCTATGTGACAATGAGATAGAGCTAACCGTACTCGCTGGATAGA
AATACTGTGGCGGAACCTGGCAAGGAATTATAGACAAGGTCAGTAATACTCTAATATTACCTATATCATCAAGCT
GATCGATTGCTTAGCTGGACTACATCCAAGGAATGGGCTTCACGGCCATTTGGATCACTCCCGTGACTGGCCAAT
TGACCGAGGATACTGCGTATGGCTATGCCTATCACGGATACTGGCAGCAGGACATGTGGGTATCGCAAAACAGAA
AAGACAGCCCTTGAGACCTGCATGCTTACAGACCCTAGCTATGCTCTCAACTCGAACTACGGAACTGCAGACGAT
CTCAAGGCTCTCGCTACGGCTTTGCATGAACGCGATATGTATCTCATGGTCGATGTAGTAGCAAACCACATGGTG
AGTTAATGCATCCATGTCCCCAATCATGCGGGCTGAAACTGATATGTATTGGATAAAAAGGGCTACGATGGCGCA
GGCACTGACGTAGACTACACCAAATTCAACCCCTTCAACGATGCGAAGTATTTCCACCCCTACTGCTCAATCGCC
GATTACAGCAACGATACCATGGTGCAAGACTGCTGGCTTGGGGATGACAATGTTTCGCTACCGGATCTGGATACA
GAGAGCACCGAGGTGCAGGACATATGGTATGACTGGGTTGGATCTTTGGTCTCTAACTACTCGAGTAAGTTGTCT
TCTCCAATCCTCACTTCGGCAAGATATATCGCCATATCCGAAAACTAACTGGTATATAGTCGACGGTCTCCGCGT
TGACACAGTCAGACACGTCCAGAAAGATTTCTGGCCCGGCTATAATAAAGCCGCCGGCGTCTACTGCGTAGGCGA
GGTCTTTGATGGTGACGCTGATTATACCTGTCCATACCAGGAGGTAATGGACGGAGTGCTCAACTATCCAATGTG
CGACCCCGCTTGTCCATGGAATTTACCAGATACACAGAGGAAACTAAAAGCTAATTGAAAATAGTTACTACCCAC
TCCTCAATGCCTTTCAATCGACCTCTGGAAGCATGACCGACCTATACAACATGATAAATACGGTGAAATCGACTT
GCAAGGACTCAACCCTTCTCGGGAGCTTTGTGGAGAATCATGATAACCCTCGTTTTGCCTCGTAAGTGAAAACTC
AATTAGACCACCGGAAACTCCATTCTTTATGTCTAGAAGCTAATATCTCTCCTTCCGAAACCCAGCGTCACCGAC
GACATTGCCCTCGCTAAGAACGCAGTCACATTCACTATCATGGCAGACGGCATTCCTATCGTCTACGCCGGGCAG
GAGCAACACTACAATGGTGGCGAAGACCCAGCTAATCGCGAGGCTGTATGGTTGTCCGGGTTCAACACCGACAGC
GAACTGTACAAGCTCATTGCAACGGCCAATGCTGCGAGAAACCAGGCGATTGCTAAAAGTACCAACTATACTATT
TACCAGGTATATGCTTGTCTCTATGTCTGTCGAAAGGAAGGAATAAGAGAATGTAAATGGCTAACTCAGTCTTGA
CAGAACTACCCAATCTACAAAGACGATACCACCATCGCCATGCGGAAGGGCTTTGACGGCGGACAAATAATCACT
GTATTGAGCAATCTCGGTGCAGGAGGTGCAGAGTACTCGGCTTCAATTCCTGATACTGGATTCGCAGCTGGTGAG
GAGTTGACGGAGGTTGTGTCCTGCGCTAGTGTTACTGCCGGTGATAGTGGGGAGGTGTCTGTTGCTATGGCGGGT
GGAGAGCCCAGGATTTTACTGCCTACCTCTTTACTTGAGGGCTCAACTCTGTGTTCGTCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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