Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g7684.t1
Gene name
Location	scaffold_25:126648..128661
Strand	-
Gene length (bp)	2013
Transcript length (bp)	1488
Coding sequence length (bp)	1488
Protein length (aa)	496

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00128	Alpha-amylase	Alpha amylase, catalytic domain	1.9E-71	58	359
PF09260	A_amylase_dom_C	Alpha-amylase, domain C	1.5E-29	404	493

GO

GO Term	Description	Terminal node
GO:0016052	carbohydrate catabolic process	Yes
GO:0005509	calcium ion binding	Yes
GO:0005975	carbohydrate metabolic process	Yes
GO:0004556	alpha-amylase activity	Yes
GO:0003824	catalytic activity	No
GO:0044238	primary metabolic process	No
GO:0046872	metal ion binding	No
GO:0043167	ion binding	No
GO:0016160	amylase activity	No
GO:0008150	biological_process	No
GO:0071704	organic substance metabolic process	No
GO:0008152	metabolic process	No
GO:0005488	binding	No
GO:0009056	catabolic process	No
GO:0016798	hydrolase activity, acting on glycosyl bonds	No
GO:0003674	molecular_function	No
GO:1901575	organic substance catabolic process	No
GO:0016787	hydrolase activity	No
GO:0043169	cation binding	No
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g7684.t1 MVLARFAWLASLISIAIAATPDEWRSRSIYFMLTDRFARTDGSTTATCDTSDRKYCGGTWQGIIDKLDYIQGMGF TAIWITPVTGQLTEDTAYGYAYHGYWQQDIYALNSNYGTADDLKALATALHERDMYLMVDVVANHMGYDGAGTDV DYTKFNPFNDAKYFHPYCSIADYSNDTMVQDCWLGDDNVSLPDLDTESTEVQDIWYDWVGSLVSNYSIDGLRVDT VRHVQKDFWPGYNKAAGVYCVGEVFDGDADYTCPYQEVMDGVLNYPIYYPLLNAFQSTSGSMTDLYNMINTVKST CKDSTLLGSFVENHDNPRFASVTDDIALAKNAVTFTIMADGIPIVYAGQEQHYNGGEDPANREAVWLSGFNTDSE LYKLIATANAARNQAIAKSTNYTIYQNYPIYKDDTTIAMRKGFDGGQIITVLSNLGAGGAEYSASIPDTGFAAGE ELTEVVSCASVTAGDSGEVSVAMAGGEPRILLPTSLLEGSTLCSS*
Coding	>Pro_DTO377G3_2\|g7684.t1 ATGGTTCTCGCACGATTTGCTTGGCTTGCTAGCTTGATTAGCATTGCCATTGCTGCCACTCCAGATGAATGGCGC TCACGGTCGATCTACTTCATGCTCACTGATCGATTCGCCCGAACGGATGGTTCAACTACTGCCACCTGTGATACC AGTGATAGAAAATACTGTGGCGGAACCTGGCAAGGAATTATAGACAAGCTGGACTACATCCAAGGAATGGGCTTC ACGGCCATTTGGATCACTCCCGTGACTGGCCAATTGACCGAGGATACTGCGTATGGCTATGCCTATCACGGATAC TGGCAGCAGGACATCTATGCTCTCAACTCGAACTACGGAACTGCAGACGATCTCAAGGCTCTCGCTACGGCTTTG CATGAACGCGATATGTATCTCATGGTCGATGTAGTAGCAAACCACATGGGCTACGATGGCGCAGGCACTGACGTA GACTACACCAAATTCAACCCCTTCAACGATGCGAAGTATTTCCACCCCTACTGCTCAATCGCCGATTACAGCAAC GATACCATGGTGCAAGACTGCTGGCTTGGGGATGACAATGTTTCGCTACCGGATCTGGATACAGAGAGCACCGAG GTGCAGGACATATGGTATGACTGGGTTGGATCTTTGGTCTCTAACTACTCGATCGACGGTCTCCGCGTTGACACA GTCAGACACGTCCAGAAAGATTTCTGGCCCGGCTATAATAAAGCCGCCGGCGTCTACTGCGTAGGCGAGGTCTTT GATGGTGACGCTGATTATACCTGTCCATACCAGGAGGTAATGGACGGAGTGCTCAACTATCCAATTTACTACCCA CTCCTCAATGCCTTTCAATCGACCTCTGGAAGCATGACCGACCTATACAACATGATAAATACGGTGAAATCGACT TGCAAGGACTCAACCCTTCTCGGGAGCTTTGTGGAGAATCATGATAACCCTCGTTTTGCCTCCGTCACCGACGAC ATTGCCCTCGCTAAGAACGCAGTCACATTCACTATCATGGCAGACGGCATTCCTATCGTCTACGCCGGGCAGGAG CAACACTACAATGGTGGCGAAGACCCAGCTAATCGCGAGGCTGTATGGTTGTCCGGGTTCAACACCGACAGCGAA CTGTACAAGCTCATTGCAACGGCCAATGCTGCGAGAAACCAGGCGATTGCTAAAAGTACCAACTATACTATTTAC CAGAACTACCCAATCTACAAAGACGATACCACCATCGCCATGCGGAAGGGCTTTGACGGCGGACAAATAATCACT GTATTGAGCAATCTCGGTGCAGGAGGTGCAGAGTACTCGGCTTCAATTCCTGATACTGGATTCGCAGCTGGTGAG GAGTTGACGGAGGTTGTGTCCTGCGCTAGTGTTACTGCCGGTGATAGTGGGGAGGTGTCTGTTGCTATGGCGGGT GGAGAGCCCAGGATTTTACTGCCTACCTCTTTACTTGAGGGCTCAACTCTGTGTTCGTCGTAG
Transcript	>Pro_DTO377G3_2\|g7684.t1 ATGGTTCTCGCACGATTTGCTTGGCTTGCTAGCTTGATTAGCATTGCCATTGCTGCCACTCCAGATGAATGGCGC TCACGGTCGATCTACTTCATGCTCACTGATCGATTCGCCCGAACGGATGGTTCAACTACTGCCACCTGTGATACC AGTGATAGAAAATACTGTGGCGGAACCTGGCAAGGAATTATAGACAAGCTGGACTACATCCAAGGAATGGGCTTC ACGGCCATTTGGATCACTCCCGTGACTGGCCAATTGACCGAGGATACTGCGTATGGCTATGCCTATCACGGATAC TGGCAGCAGGACATCTATGCTCTCAACTCGAACTACGGAACTGCAGACGATCTCAAGGCTCTCGCTACGGCTTTG CATGAACGCGATATGTATCTCATGGTCGATGTAGTAGCAAACCACATGGGCTACGATGGCGCAGGCACTGACGTA GACTACACCAAATTCAACCCCTTCAACGATGCGAAGTATTTCCACCCCTACTGCTCAATCGCCGATTACAGCAAC GATACCATGGTGCAAGACTGCTGGCTTGGGGATGACAATGTTTCGCTACCGGATCTGGATACAGAGAGCACCGAG GTGCAGGACATATGGTATGACTGGGTTGGATCTTTGGTCTCTAACTACTCGATCGACGGTCTCCGCGTTGACACA GTCAGACACGTCCAGAAAGATTTCTGGCCCGGCTATAATAAAGCCGCCGGCGTCTACTGCGTAGGCGAGGTCTTT GATGGTGACGCTGATTATACCTGTCCATACCAGGAGGTAATGGACGGAGTGCTCAACTATCCAATTTACTACCCA CTCCTCAATGCCTTTCAATCGACCTCTGGAAGCATGACCGACCTATACAACATGATAAATACGGTGAAATCGACT TGCAAGGACTCAACCCTTCTCGGGAGCTTTGTGGAGAATCATGATAACCCTCGTTTTGCCTCCGTCACCGACGAC ATTGCCCTCGCTAAGAACGCAGTCACATTCACTATCATGGCAGACGGCATTCCTATCGTCTACGCCGGGCAGGAG CAACACTACAATGGTGGCGAAGACCCAGCTAATCGCGAGGCTGTATGGTTGTCCGGGTTCAACACCGACAGCGAA CTGTACAAGCTCATTGCAACGGCCAATGCTGCGAGAAACCAGGCGATTGCTAAAAGTACCAACTATACTATTTAC CAGAACTACCCAATCTACAAAGACGATACCACCATCGCCATGCGGAAGGGCTTTGACGGCGGACAAATAATCACT GTATTGAGCAATCTCGGTGCAGGAGGTGCAGAGTACTCGGCTTCAATTCCTGATACTGGATTCGCAGCTGGTGAG GAGTTGACGGAGGTTGTGTCCTGCGCTAGTGTTACTGCCGGTGATAGTGGGGAGGTGTCTGTTGCTATGGCGGGT GGAGAGCCCAGGATTTTACTGCCTACCTCTTTACTTGAGGGCTCAACTCTGTGTTCGTCGTAG
Gene	>Pro_DTO377G3_2\|g7684.t1 ATGGTTCTCGCACGATTTGCTTGGCTTGCTAGCTTGATTAGCATTGCCATTGCTGCCACTCCAGATGAATGGCGC TCACGGTCGATCTACTTCATGCTCACTGATCGATTCGCCCGAACGGATGGTTCAACTACTGCCACCTGTGATACC AGTGATAGAGTCGGTTTCTGTCTATATATCGGCTATGTGACAATGAGATAGAGCTAACCGTACTCGCTGGATAGA AATACTGTGGCGGAACCTGGCAAGGAATTATAGACAAGGTCAGTAATACTCTAATATTACCTATATCATCAAGCT GATCGATTGCTTAGCTGGACTACATCCAAGGAATGGGCTTCACGGCCATTTGGATCACTCCCGTGACTGGCCAAT TGACCGAGGATACTGCGTATGGCTATGCCTATCACGGATACTGGCAGCAGGACATGTGGGTATCGCAAAACAGAA AAGACAGCCCTTGAGACCTGCATGCTTACAGACCCTAGCTATGCTCTCAACTCGAACTACGGAACTGCAGACGAT CTCAAGGCTCTCGCTACGGCTTTGCATGAACGCGATATGTATCTCATGGTCGATGTAGTAGCAAACCACATGGTG AGTTAATGCATCCATGTCCCCAATCATGCGGGCTGAAACTGATATGTATTGGATAAAAAGGGCTACGATGGCGCA GGCACTGACGTAGACTACACCAAATTCAACCCCTTCAACGATGCGAAGTATTTCCACCCCTACTGCTCAATCGCC GATTACAGCAACGATACCATGGTGCAAGACTGCTGGCTTGGGGATGACAATGTTTCGCTACCGGATCTGGATACA GAGAGCACCGAGGTGCAGGACATATGGTATGACTGGGTTGGATCTTTGGTCTCTAACTACTCGAGTAAGTTGTCT TCTCCAATCCTCACTTCGGCAAGATATATCGCCATATCCGAAAACTAACTGGTATATAGTCGACGGTCTCCGCGT TGACACAGTCAGACACGTCCAGAAAGATTTCTGGCCCGGCTATAATAAAGCCGCCGGCGTCTACTGCGTAGGCGA GGTCTTTGATGGTGACGCTGATTATACCTGTCCATACCAGGAGGTAATGGACGGAGTGCTCAACTATCCAATGTG CGACCCCGCTTGTCCATGGAATTTACCAGATACACAGAGGAAACTAAAAGCTAATTGAAAATAGTTACTACCCAC TCCTCAATGCCTTTCAATCGACCTCTGGAAGCATGACCGACCTATACAACATGATAAATACGGTGAAATCGACTT GCAAGGACTCAACCCTTCTCGGGAGCTTTGTGGAGAATCATGATAACCCTCGTTTTGCCTCGTAAGTGAAAACTC AATTAGACCACCGGAAACTCCATTCTTTATGTCTAGAAGCTAATATCTCTCCTTCCGAAACCCAGCGTCACCGAC GACATTGCCCTCGCTAAGAACGCAGTCACATTCACTATCATGGCAGACGGCATTCCTATCGTCTACGCCGGGCAG GAGCAACACTACAATGGTGGCGAAGACCCAGCTAATCGCGAGGCTGTATGGTTGTCCGGGTTCAACACCGACAGC GAACTGTACAAGCTCATTGCAACGGCCAATGCTGCGAGAAACCAGGCGATTGCTAAAAGTACCAACTATACTATT TACCAGGTATATGCTTGTCTCTATGTCTGTCGAAAGGAAGGAATAAGAGAATGTAAATGGCTAACTCAGTCTTGA CAGAACTACCCAATCTACAAAGACGATACCACCATCGCCATGCGGAAGGGCTTTGACGGCGGACAAATAATCACT GTATTGAGCAATCTCGGTGCAGGAGGTGCAGAGTACTCGGCTTCAATTCCTGATACTGGATTCGCAGCTGGTGAG GAGTTGACGGAGGTTGTGTCCTGCGCTAGTGTTACTGCCGGTGATAGTGGGGAGGTGTCTGTTGCTATGGCGGGT GGAGAGCCCAGGATTTTACTGCCTACCTCTTTACTTGAGGGCTCAACTCTGTGTTCGTCGTAG

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences