Protein ID | Pro_DTO377G3_2|g7673.t1 |
Gene name | |
Location | scaffold_25:85500..86920 |
Strand | - |
Gene length (bp) | 1420 |
Transcript length (bp) | 1128 |
Coding sequence length (bp) | 1128 |
Protein length (aa) | 376 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05739 | SNARE | SNARE domain | 1.3E-13 | 271 | 323 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 309 | 326 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g7673.t1 MWRDRTNLYLSYRQSLIHHPAKKPHFTPTNGFSDTPSHPEENRRLISETDEDGDMVIEMDLLPPRWVDVQEEVSE QLAEIAQNSAQLDKLHQKHLLPGFGDEDLRKQDEGVIERLTQDVTRSFHDCQRAIMRIETMVGESKAHGGVTSGE ETMAKNIQISLAARVQEASARFRKKQSTYLRKLRDLEGIATPFDGTATQTQNPYTDPSMMESDADRSFSQNMLQQ TSQRQTGQNDAAIAQREREINDIAKGIIELSDIFRELQSMIIDQGTMLDRIDYNVERMGTEVKAADKELKVATSY QQRTTKRKVMLLLLLIVVGMIIVLVVKPKGKSSPPPPPEDESSNNIRSVLAYRGRRHQLSNRFARDRWMDPDIFR * |
Coding | >Pro_DTO377G3_2|g7673.t1 ATGTGGCGGGATCGAACCAACCTCTACCTCTCCTACCGCCAATCCCTAATCCACCACCCAGCTAAAAAGCCACAC TTCACACCAACCAATGGCTTCTCCGACACACCCTCGCACCCGGAGGAAAATAGGCGCCTAATATCCGAAACAGAC GAAGATGGCGACATGGTCATTGAAATGGACCTCTTACCGCCGCGCTGGGTCGACGTGCAGGAAGAGGTCTCCGAG CAGTTAGCCGAGATTGCCCAGAACTCCGCCCAGCTGGACAAGCTGCACCAGAAACACCTGCTCCCCGGCTTCGGC GACGAGGACCTGCGCAAGCAAGACGAGGGCGTTATTGAGCGCTTGACGCAGGATGTCACGCGCTCCTTTCATGAT TGCCAGCGCGCTATCATGCGCATCGAGACTATGGTCGGCGAGTCTAAGGCGCATGGGGGTGTTACGAGTGGGGAA GAGACTATGGCGAAGAATATTCAGATTTCACTTGCTGCGAGGGTGCAGGAGGCTAGTGCTAGGTTTAGGAAGAAG CAGAGTACTTATTTGCGGAAATTGCGAGATCTCGAGGGTATCGCGACACCGTTCGATGGCACGGCTACGCAGACC CAGAACCCATACACGGATCCGTCGATGATGGAGTCAGATGCCGACAGATCCTTTTCGCAGAACATGTTACAGCAG ACTTCACAACGGCAGACCGGTCAGAATGATGCTGCTATCGCACAGCGGGAGCGCGAGATCAATGATATTGCAAAG GGGATTATCGAGCTTTCGGATATTTTCCGTGAACTGCAGAGCATGATTATCGACCAGGGAACCATGCTAGACCGT ATAGATTACAACGTCGAGCGAATGGGTACCGAGGTTAAGGCTGCGGATAAGGAGCTTAAAGTGGCTACGAGTTAT CAACAACGAACCACTAAGCGTAAGGTCATGCTATTACTCCTGTTGATCGTCGTGGGAATGATAATTGTACTGGTT GTGAAACCAAAGGGGAAGTCTTCCCCGCCGCCGCCTCCGGAGGATGAATCTTCGAACAATATCCGCTCCGTGTTG GCTTACCGGGGGCGAAGACATCAGTTGTCGAACCGCTTCGCGCGAGATCGATGGATGGATCCGGATATATTCCGA TGA |
Transcript | >Pro_DTO377G3_2|g7673.t1 ATGTGGCGGGATCGAACCAACCTCTACCTCTCCTACCGCCAATCCCTAATCCACCACCCAGCTAAAAAGCCACAC TTCACACCAACCAATGGCTTCTCCGACACACCCTCGCACCCGGAGGAAAATAGGCGCCTAATATCCGAAACAGAC GAAGATGGCGACATGGTCATTGAAATGGACCTCTTACCGCCGCGCTGGGTCGACGTGCAGGAAGAGGTCTCCGAG CAGTTAGCCGAGATTGCCCAGAACTCCGCCCAGCTGGACAAGCTGCACCAGAAACACCTGCTCCCCGGCTTCGGC GACGAGGACCTGCGCAAGCAAGACGAGGGCGTTATTGAGCGCTTGACGCAGGATGTCACGCGCTCCTTTCATGAT TGCCAGCGCGCTATCATGCGCATCGAGACTATGGTCGGCGAGTCTAAGGCGCATGGGGGTGTTACGAGTGGGGAA GAGACTATGGCGAAGAATATTCAGATTTCACTTGCTGCGAGGGTGCAGGAGGCTAGTGCTAGGTTTAGGAAGAAG CAGAGTACTTATTTGCGGAAATTGCGAGATCTCGAGGGTATCGCGACACCGTTCGATGGCACGGCTACGCAGACC CAGAACCCATACACGGATCCGTCGATGATGGAGTCAGATGCCGACAGATCCTTTTCGCAGAACATGTTACAGCAG ACTTCACAACGGCAGACCGGTCAGAATGATGCTGCTATCGCACAGCGGGAGCGCGAGATCAATGATATTGCAAAG GGGATTATCGAGCTTTCGGATATTTTCCGTGAACTGCAGAGCATGATTATCGACCAGGGAACCATGCTAGACCGT ATAGATTACAACGTCGAGCGAATGGGTACCGAGGTTAAGGCTGCGGATAAGGAGCTTAAAGTGGCTACGAGTTAT CAACAACGAACCACTAAGCGTAAGGTCATGCTATTACTCCTGTTGATCGTCGTGGGAATGATAATTGTACTGGTT GTGAAACCAAAGGGGAAGTCTTCCCCGCCGCCGCCTCCGGAGGATGAATCTTCGAACAATATCCGCTCCGTGTTG GCTTACCGGGGGCGAAGACATCAGTTGTCGAACCGCTTCGCGCGAGATCGATGGATGGATCCGGATATATTCCGA TGA |
Gene | >Pro_DTO377G3_2|g7673.t1 ATGTGGCGGGATCGAACCAACCTGTATGCATCCCCATGTACCCTACCCAAGCGCAACCCGTCATCGCCGGACAGA GCCAAAAAAAAAAAGAAAAGAAACACCACCCATAAAACTCAGCCTATAAAGCATGCCAGCAACTAACACTCCACC TCCAAATCCAGCTACCTCTCCTACCGCCAATCCCTAATCCACCACCCAGCTAAAAAGCCACACTTCACACCAACC AATGGCTTCTCCGACACACCCTCGCACCCGGAGGAAAATAGGCGCCTAATATCCGAAACAGACGAAGATGGCGAC ATGGTCATTGAAATGGACCTCTTACCGCCGCGCTGGGTCGACGTGCAGGAAGAGGTCTCCGAGCAGTTAGCCGAG ATTGCCCAGAACTCCGCCCAGCTGGACAAGCTGCACCAGAAACACCTGCTCCCCGGCTTCGGCGACGAGGACCTG CGCAAGCAAGACGAGGGCGTTATTGAGCGCTTGACGCAGGATGTCACGCGCTCCTTTCATGATTGCCAGCGCGCT ATCATGCGCATCGAGACTATGGTCGGCGAGTCTAAGGCGCATGGGGGTGTTACGAGTGGGGAAGAGACTATGGCG AAGAATATTCAGATTTCACTTGCTGCGAGGGTGCAGGAGGCTAGTGCTAGGTTTAGGAAGAAGCAGAGTACTTAT TTGCGGAGTATGAGACCCTTCTTTCTTTTTGTGTTCTTGTTCTTGTTCTCTTCCCGGTGAAGGCCGAATCGGTTG GTTCCATGTGCTGATTTGTCTCTGTCCAGAATTGCGAGATCTCGAGGGTATCGCGACACCGTTCGATGGCACGGC TACGCAGACCCAGAACCCATACACGGATCCGTCGATGATGGAGTCAGATGCCGACAGATCCTTTTCGCAGAACAT GTTACAGCAGACTTCACAACGGCAGACCGGTCAGAATGATGCTGCTATCGCACAGCGGGAGCGCGAGATCAATGA TATTGCAAAGGGGATTATCGAGCTTTCGGATATTTTCCGTGAACTGCAGAGCATGATTATCGACCAGGGAACCAT GCTAGACCGTATAGATTACAACGTCGAGCGAATGGGTACCGAGGTTAAGGCTGCGGATAAGGAGCTTAAAGTGGT ATGTTCCTTCTTTACTAGCAACTTCCCCCCCAGAGCGAGGAACTGACTTATATAGGCTACGAGTTATCAACAACG AACCACTAAGCGTAAGGTCATGCTATTACTCCTGTTGATCGTCGTGGGAATGATAATTGTACTGGTTGTGAAACC AAAGGGGAAGTCTTCCCCGCCGCCGCCTCCGGAGGATGAATCTTCGAACAATATCCGCTCCGTGTTGGCTTACCG GGGGCGAAGACATCAGTTGTCGAACCGCTTCGCGCGAGATCGATGGATGGATCCGGATATATTCCGATGA |