© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g7669.t1 |
| Gene name | |
| Location | scaffold_25:77375..79825 |
| Strand | - |
| Gene length (bp) | 2450 |
| Transcript length (bp) | 2340 |
| Coding sequence length (bp) | 2340 |
| Protein length (aa) | 780 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00664 | ABC_membrane | ABC transporter transmembrane region | 3.8E-52 | 171 | 443 |
| PF00005 | ABC_tran | ABC transporter | 4.4E-35 | 512 | 659 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005524 | ATP binding | Yes |
| GO:0140359 | ABC-type transporter activity | Yes |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0051234 | establishment of localization | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0005575 | cellular_component | No |
| GO:0015399 | primary active transmembrane transporter activity | No |
| GO:0140657 | ATP-dependent activity | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0043167 | ion binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0005488 | binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0003674 | molecular_function | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0042626 | ATPase-coupled transmembrane transporter activity | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0051179 | localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043168 | anion binding | No |
| GO:0009987 | cellular process | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 170 | 192 | 22 |
| 2 | 217 | 239 | 22 |
| 3 | 317 | 339 | 22 |
| 4 | 400 | 422 | 22 |
| 5 | 429 | 451 | 22 |
| Orthofinder run ID | 2 |
| Orthogroup | 2697 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g7669.t1 MRGARLPVSLALGVSPRQALRPYSSFACDLLPKTRSSLISSGDHNGLNRLNSTASGTLRDGANPLLLQNISFRYT ASTSRIVSQARFLCSTSQLRQAKPPATSIEPTTRSATEPKEEEEDKGFELSERAAQAAQVNMSARLAKEGAAGKK SGVSEIWRLLKIARPESKALGFAFFFLLISSSITMAVPFSIGKIMDSATKGVTEGGSELFGLSMPMFYTALGGIL LIGAGANYGRIIILRIVGERIVARLRSKLFRQTFVQDAEFFDANRVGDLISRLSSDTIIVGKSITQNLSDGLRAA VSGAAGFSLMAYTSAKLSMILLVLLPPIGLGALFYGRAIRNLSRKIQKNLGSLTKIAEERLGNVKTSQSFAGEVI EVRRYNKQVRKIFELGKKESLISATFFSSTGLMGNMTILTLLYVGSGMVQSGAISIGELTSFLMYTAYAGSSMFG LSSFYSELMKGVGAASRLFELQDRQPTIHPTKGMKVETARGPIRFEHVTFCYPTRPAVKIFQDLNFEIPQGTNVA IVGPSGGGKSTIASILLRFYSPTKGRVLINGKDIMGMNAKSLRRKIGVVSQEPVLFSGTIADNISYGMPRATRSE IIAAARKANCQFISDFPDGLDTHVGARGAQLSGGQKQRIAIARALIKEPDILILDEATSALDAESETLVNSALAA LLSGNNTTISIAHRLSTIKRSDTIIVLGPDGRVAEQGSYEQLSSRPDGAFTKLMEWQMSGGETTSPSGKPTEADE PWKLQTESEPDLEEDDVEEVEETASSKKE* |
| Coding | >Pro_DTO377G3_2|g7669.t1 ATGCGCGGTGCCAGGCTGCCGGTCTCTCTGGCCTTGGGCGTTAGCCCACGGCAGGCTTTGAGACCATATAGCTCC TTTGCTTGCGATCTACTTCCCAAAACAAGATCGTCTCTTATCTCTTCCGGAGACCACAATGGGTTGAACCGTCTC AATTCAACCGCCTCGGGTACACTCCGGGATGGTGCCAACCCACTATTGCTTCAAAATATCAGCTTCAGATATACC GCCTCTACATCTCGCATTGTCTCACAAGCACGCTTTCTATGTTCGACTTCTCAACTTCGCCAAGCGAAACCACCC GCAACCTCCATAGAGCCAACTACTCGGTCAGCTACAGAACCGAAAGAGGAGGAGGAGGACAAGGGGTTTGAACTA TCTGAGCGAGCAGCGCAGGCAGCGCAGGTCAACATGAGCGCTAGACTGGCCAAGGAAGGCGCAGCGGGAAAGAAG TCCGGGGTTTCAGAAATCTGGCGGCTTTTGAAGATCGCGCGCCCCGAATCCAAGGCCCTCGGTTTTGCCTTCTTT TTCCTCCTAATCTCCTCGTCAATCACAATGGCAGTTCCCTTCTCCATTGGTAAAATTATGGACTCTGCGACCAAA GGTGTAACCGAAGGAGGTAGCGAATTGTTCGGCTTGAGTATGCCCATGTTTTACACCGCTCTCGGTGGAATCCTA CTTATTGGGGCTGGTGCAAACTATGGGCGCATCATCATTCTTCGAATTGTTGGCGAGCGAATTGTTGCCAGGCTA CGCTCCAAGCTTTTCCGTCAAACTTTCGTTCAGGATGCCGAGTTCTTCGATGCTAACCGGGTTGGTGATCTGATA TCGCGCCTTAGCTCCGACACTATCATTGTTGGCAAGAGTATCACGCAGAACTTGTCCGATGGTCTACGAGCTGCT GTTAGCGGTGCTGCTGGGTTCAGTCTGATGGCCTATACTAGTGCAAAGCTGTCCATGATCTTGCTCGTCTTGCTT CCTCCAATCGGTCTCGGGGCTCTCTTTTACGGTCGAGCTATCAGGAACCTCAGTCGTAAAATTCAAAAGAACTTG GGATCGTTGACTAAGATTGCGGAAGAGCGTCTGGGCAATGTCAAGACTAGTCAGTCGTTTGCCGGTGAAGTTATC GAAGTCCGCCGGTACAACAAACAAGTCCGCAAGATCTTCGAGCTTGGTAAAAAAGAGTCTTTGATTAGTGCAACC TTCTTCAGCTCGACTGGTTTGATGGGAAATATGACCATTTTGACCCTGCTATATGTTGGCAGTGGGATGGTTCAG TCAGGTGCTATCAGCATTGGAGAATTGACTTCGTTTTTGATGTACACTGCCTATGCAGGCTCCAGCATGTTCGGT CTCTCCAGCTTCTATTCGGAGCTGATGAAGGGTGTGGGTGCGGCGAGTCGACTCTTTGAGCTGCAAGATCGTCAG CCCACGATCCACCCAACCAAGGGTATGAAGGTTGAAACCGCGCGTGGACCCATCCGGTTTGAGCATGTCACGTTC TGCTACCCTACCCGTCCCGCTGTGAAGATCTTTCAAGATTTGAACTTCGAAATCCCTCAAGGAACTAACGTTGCG ATCGTTGGACCATCTGGTGGAGGCAAATCCACTATTGCGTCAATTTTGCTCCGGTTCTATAGCCCCACCAAGGGC AGGGTCTTGATCAACGGGAAAGATATCATGGGAATGAACGCCAAGTCCCTTCGCAGAAAGATTGGCGTGGTTTCC CAGGAGCCTGTACTTTTCTCTGGAACAATCGCCGACAACATCTCCTACGGCATGCCTCGAGCAACACGCTCAGAG ATCATTGCTGCTGCACGCAAGGCTAACTGTCAATTCATCAGCGACTTCCCTGATGGACTTGATACTCACGTTGGG GCTCGTGGAGCTCAGTTATCTGGTGGTCAGAAGCAGCGGATTGCCATTGCGCGTGCCCTTATCAAGGAGCCTGAT ATTCTAATTCTGGATGAAGCCACTTCCGCCCTCGACGCTGAATCCGAGACCCTCGTTAACAGTGCGTTGGCCGCT CTGCTTAGCGGTAACAACACTACAATTAGCATTGCCCATCGCCTTTCCACCATCAAGCGCTCCGACACTATCATT GTCCTAGGCCCCGACGGCAGGGTCGCCGAGCAAGGCTCCTACGAGCAGCTCAGTTCTCGCCCGGATGGCGCCTTT ACGAAGCTTATGGAATGGCAAATGAGTGGTGGCGAAACAACGTCACCTTCGGGCAAGCCGACTGAGGCCGATGAG CCCTGGAAGCTCCAGACGGAGTCAGAACCTGATCTGGAGGAAGATGATGTAGAAGAGGTAGAAGAGACAGCCTCT TCGAAAAAGGAATAA |
| Transcript | >Pro_DTO377G3_2|g7669.t1 ATGCGCGGTGCCAGGCTGCCGGTCTCTCTGGCCTTGGGCGTTAGCCCACGGCAGGCTTTGAGACCATATAGCTCC TTTGCTTGCGATCTACTTCCCAAAACAAGATCGTCTCTTATCTCTTCCGGAGACCACAATGGGTTGAACCGTCTC AATTCAACCGCCTCGGGTACACTCCGGGATGGTGCCAACCCACTATTGCTTCAAAATATCAGCTTCAGATATACC GCCTCTACATCTCGCATTGTCTCACAAGCACGCTTTCTATGTTCGACTTCTCAACTTCGCCAAGCGAAACCACCC GCAACCTCCATAGAGCCAACTACTCGGTCAGCTACAGAACCGAAAGAGGAGGAGGAGGACAAGGGGTTTGAACTA TCTGAGCGAGCAGCGCAGGCAGCGCAGGTCAACATGAGCGCTAGACTGGCCAAGGAAGGCGCAGCGGGAAAGAAG TCCGGGGTTTCAGAAATCTGGCGGCTTTTGAAGATCGCGCGCCCCGAATCCAAGGCCCTCGGTTTTGCCTTCTTT TTCCTCCTAATCTCCTCGTCAATCACAATGGCAGTTCCCTTCTCCATTGGTAAAATTATGGACTCTGCGACCAAA GGTGTAACCGAAGGAGGTAGCGAATTGTTCGGCTTGAGTATGCCCATGTTTTACACCGCTCTCGGTGGAATCCTA CTTATTGGGGCTGGTGCAAACTATGGGCGCATCATCATTCTTCGAATTGTTGGCGAGCGAATTGTTGCCAGGCTA CGCTCCAAGCTTTTCCGTCAAACTTTCGTTCAGGATGCCGAGTTCTTCGATGCTAACCGGGTTGGTGATCTGATA TCGCGCCTTAGCTCCGACACTATCATTGTTGGCAAGAGTATCACGCAGAACTTGTCCGATGGTCTACGAGCTGCT GTTAGCGGTGCTGCTGGGTTCAGTCTGATGGCCTATACTAGTGCAAAGCTGTCCATGATCTTGCTCGTCTTGCTT CCTCCAATCGGTCTCGGGGCTCTCTTTTACGGTCGAGCTATCAGGAACCTCAGTCGTAAAATTCAAAAGAACTTG GGATCGTTGACTAAGATTGCGGAAGAGCGTCTGGGCAATGTCAAGACTAGTCAGTCGTTTGCCGGTGAAGTTATC GAAGTCCGCCGGTACAACAAACAAGTCCGCAAGATCTTCGAGCTTGGTAAAAAAGAGTCTTTGATTAGTGCAACC TTCTTCAGCTCGACTGGTTTGATGGGAAATATGACCATTTTGACCCTGCTATATGTTGGCAGTGGGATGGTTCAG TCAGGTGCTATCAGCATTGGAGAATTGACTTCGTTTTTGATGTACACTGCCTATGCAGGCTCCAGCATGTTCGGT CTCTCCAGCTTCTATTCGGAGCTGATGAAGGGTGTGGGTGCGGCGAGTCGACTCTTTGAGCTGCAAGATCGTCAG CCCACGATCCACCCAACCAAGGGTATGAAGGTTGAAACCGCGCGTGGACCCATCCGGTTTGAGCATGTCACGTTC TGCTACCCTACCCGTCCCGCTGTGAAGATCTTTCAAGATTTGAACTTCGAAATCCCTCAAGGAACTAACGTTGCG ATCGTTGGACCATCTGGTGGAGGCAAATCCACTATTGCGTCAATTTTGCTCCGGTTCTATAGCCCCACCAAGGGC AGGGTCTTGATCAACGGGAAAGATATCATGGGAATGAACGCCAAGTCCCTTCGCAGAAAGATTGGCGTGGTTTCC CAGGAGCCTGTACTTTTCTCTGGAACAATCGCCGACAACATCTCCTACGGCATGCCTCGAGCAACACGCTCAGAG ATCATTGCTGCTGCACGCAAGGCTAACTGTCAATTCATCAGCGACTTCCCTGATGGACTTGATACTCACGTTGGG GCTCGTGGAGCTCAGTTATCTGGTGGTCAGAAGCAGCGGATTGCCATTGCGCGTGCCCTTATCAAGGAGCCTGAT ATTCTAATTCTGGATGAAGCCACTTCCGCCCTCGACGCTGAATCCGAGACCCTCGTTAACAGTGCGTTGGCCGCT CTGCTTAGCGGTAACAACACTACAATTAGCATTGCCCATCGCCTTTCCACCATCAAGCGCTCCGACACTATCATT GTCCTAGGCCCCGACGGCAGGGTCGCCGAGCAAGGCTCCTACGAGCAGCTCAGTTCTCGCCCGGATGGCGCCTTT ACGAAGCTTATGGAATGGCAAATGAGTGGTGGCGAAACAACGTCACCTTCGGGCAAGCCGACTGAGGCCGATGAG CCCTGGAAGCTCCAGACGGAGTCAGAACCTGATCTGGAGGAAGATGATGTAGAAGAGGTAGAAGAGACAGCCTCT TCGAAAAAGGAATAA |
| Gene | >Pro_DTO377G3_2|g7669.t1 ATGCGCGGTGCCAGGCTGCCGGTCTCTCTGGCCTTGGGCGTTAGCCCACGGCAGGCTTTGAGACCATATAGCTCC TTTGCTTGCGATCTACTTCCCAAAACAAGATCGTCTCTTATCTCTTCCGGAGACCACAATGGGTTGAACCGTCTC AATTCAACCGCCTCGGGTACACTCCGGGATGGTGCCAACCCACTATTGCTTCAAAATATCAGCTTCAGATATACC GCCTCTACATCTCGCATTGTCTCACAAGCACGCTTTCTATGTTCGACTTCTCAACTTCGCCAAGCGAAACCACCC GCAACCTCCATAGAGCCAACTACTCGGTCAGCTACAGAACCGAAAGAGGAGGAGGAGGACAAGGGGTTTGAACTA TCTGAGCGAGCAGCGCAGGCAGCGCAGGTCAACATGAGCGCTAGACTGGCCAAGGAAGGCGCAGCGGGAAAGAAG TCCGGGGTTTCAGAAATCTGGCGGCTTTTGAAGATCGCGCGCCCCGAATCCAAGGCCCTCGGTTTTGCCTTCTTT TTCCTCCTAATCTCCTCGTCAATCACAATGGCAGTTCCCTTCTCCATTGGTAAAATTATGGACTCTGCGACCAAA GGTGTAACCGAAGGAGGTAGCGAATTGTTCGGCTTGAGTATGCCCATGTTTTACACCGCTCTCGGTGGAATCCTA CTTATTGGGGCTGGTGCAAACTATGGGCGCATCATCATTCTTCGAATTGTTGGCGAGCGAATTGTTGCCAGGCTA CGCTCCAAGCTTTTCCGTCAAACTTTCGTTCAGGATGCCGAGTTCTTCGATGCTAACCGGGTTGGTGATCTGATA TCGCGCCTTAGCTCCGACACTATCATTGTTGGCAAGAGTATCACGCAGAACTTGTCCGATGGTCTACGAGCTGCT GTTAGCGGTGCTGCTGGGTTCAGTCTGATGGCCTATACTAGTGCAAAGCTGTCCATGATCTTGCTCGTCTTGCTT CCTCCAATCGGTCTCGGGGCTCTCTTTTACGGTCGAGCTATCAGGAACCTCAGTCGTAAAATTCAAAAGAACTTG GGATCGTTGACTAAGATTGCGGAAGAGCGTCTGGGCAATGTCAAGACTAGTCAGTCGTTTGCCGGTGAAGTTATC GAAGTCCGCCGGTACAACAAACAAGTCCGCAAGATCTTCGAGCTTGGTAAAAAAGAGTCTTTGATTAGTGCAACC TTCTTCAGCTCGGTGGGTCGGCAGTCTTGATTCTTTTGCGCTTTGCGACTTTGACTGACTTCTTACTAGACTGGT TTGATGGGAAATATGACCATTTTGACCCTGCTATATGTTGGCAGTGGGATGGTTCAGTCAGGTGCTATCAGCATT GGAGAATTGACTTCGTTTTTGATGTACACTGCCTATGCAGGCTCCAGCATGTTCGGTCTCTCCAGCTTCTATTCG GAGCTGATGAAGGGTGTGGGTGCGGCGAGTCGACTCTTTGAGCTGCAAGATCGTCAGCCCACGATCCACCCAACC AAGGGTATGAAGGTTGAAACCGCGCGTGGACCCATCCGGTTTGAGCATGTCACGTTCTGCTACCCTACCCGTCCC GCTGTGAAGATCTTTCAAGATTTGAACTTCGAAATCCCTCAAGGAACTAACGTTGCGATCGTTGGACCATCTGGT GGAGGCAAATCCACTATTGCGTCAATTTTGCTCCGGTTCTATAGCCCCACCAAGGGCAGGGTCTTGATCAACGGG AAAGATATCATGGGAATGAACGCCAAGTCCCTTCGCAGAAAGATTGGCGTGGTTTCCCAGGAGCCTGTACTTTTC TCTGGAACAATCGCCGACAACATCTCCTACGGCATGCCTCGAGCAACACGCTCAGAGATCATTGCTGCTGCACGC AAGGCTAACTGTCAATTCATCAGCGACTTCGTAAGTCCACCCAGCAGCTATTATTTTTATGATCCTAGGCTAACC TAATGCAGCCTGATGGACTTGATACTCACGTTGGGGCTCGTGGAGCTCAGTTATCTGGTGGTCAGAAGCAGCGGA TTGCCATTGCGCGTGCCCTTATCAAGGAGCCTGATATTCTAATTCTGGATGAAGCCACTTCCGCCCTCGACGCTG AATCCGAGACCCTCGTTAACAGTGCGTTGGCCGCTCTGCTTAGCGGTAACAACACTACAATTAGCATTGCCCATC GCCTTTCCACCATCAAGCGCTCCGACACTATCATTGTCCTAGGCCCCGACGGCAGGGTCGCCGAGCAAGGCTCCT ACGAGCAGCTCAGTTCTCGCCCGGATGGCGCCTTTACGAAGCTTATGGAATGGCAAATGAGTGGTGGCGAAACAA CGTCACCTTCGGGCAAGCCGACTGAGGCCGATGAGCCCTGGAAGCTCCAGACGGAGTCAGAACCTGATCTGGAGG AAGATGATGTAGAAGAGGTAGAAGAGACAGCCTCTTCGAAAAAGGAATAA |