Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7652.t1
Gene name
Locationscaffold_25:44344..44954
Strand-
Gene length (bp)610
Transcript length (bp)225
Coding sequence length (bp)225
Protein length (aa) 75

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02238 COX7a Cytochrome c oxidase subunit VII 4.5E-22 17 69

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 42 64 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7652.t1
MFRATSSRMAGFVFRENRVPYYQRLFQQHDGKRQWYKTSRSGYVMYPYLISVYGLGAATMYAMCRMVLGHKTWY*
Coding >Pro_DTO377G3_2|g7652.t1
ATGTTCCGTGCTACTAGCTCCCGCATGGCTGGCTTCGTGTTCCGTGAGAACCGTGTGCCCTACTACCAGCGTCTC
TTCCAGCAACACGATGGCAAGCGCCAATGGTACAAGACCTCCCGCTCCGGCTACGTCATGTACCCCTACCTCATC
TCTGTCTACGGCCTCGGTGCTGCTACCATGTACGCCATGTGCCGCATGGTTCTCGGCCACAAGACTTGGTACTAA
Transcript >Pro_DTO377G3_2|g7652.t1
ATGTTCCGTGCTACTAGCTCCCGCATGGCTGGCTTCGTGTTCCGTGAGAACCGTGTGCCCTACTACCAGCGTCTC
TTCCAGCAACACGATGGCAAGCGCCAATGGTACAAGACCTCCCGCTCCGGCTACGTCATGTACCCCTACCTCATC
TCTGTCTACGGCCTCGGTGCTGCTACCATGTACGCCATGTGCCGCATGGTTCTCGGCCACAAGACTTGGTACTAA
Gene >Pro_DTO377G3_2|g7652.t1
ATGTTCCGTGCTACTAGCTCCCGCATGGCTGGGTATGTACTCCCTTCGAATTGCCACAATAATCCCCCGCGCACA
AACCCGACTTTGAGAGTGCGCCCATCGAATTTCCTCCCACGATCTTCGGGGTCCAATTACGATTGACGCGGCTGC
GGGACCTGTCATCCCACCATTAATTACAATTTATACTGACTGGTTCTGCTTAGCTTCGTGTTCCGTGAGAACCGT
GTGCCCTACTACCAGCGTCTCTTCCAGCAACACGATGGCAAGCGCCAATGGTACAAGGTCAGTACCCGCCGGAAG
GGGCATATGCCCTCAATGAAGTTTCCGGAAGAACAAGAAACTGACATTGGAATTGTCTCGCAGACCTCCCGCTCC
GGCTACGTCATGTACCCCTACCTCATCTCTGTCTACGGCCTCGGTGCTGGTGAGTAGACCCGTCTTCCGATATGA
GATCCGGTCGAGGATAGAAACTAATCGTCAATAGCTACCATGTACGCCATGTGCCGCATGGTTCTCGTTAGTCCA
CCCATCCGCTACTTCTCATACTCTAACGAGAAGCACGAGCGTTCATATGCTAACTTCTTTACAGGGCCACAAGAC
TTGGTACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail