Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7621.t1
Gene name
Locationscaffold_24:339049..339797
Strand-
Gene length (bp)748
Transcript length (bp)573
Coding sequence length (bp)573
Protein length (aa) 191

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05832 DUF846 Eukaryotic protein of unknown function (DUF846) 4.3E-47 18 158

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0044425 membrane part No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 47 64 17
3 110 129 19
4 133 155 22
5 167 189 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7621.t1
MDQGQGGQGELNWRLSAHPITLLVFLSIRIGALLMYLFGVLFINNFILVFIFTLLLLSADFYYLKNIAGRRLVGL
RWWNEVDTSTGDSQWVFESADPNVRTITATDKRFFWLSLYVTPALWVALAILAIVRLVGVIWLSLIVIALILTIT
NTMAFSRCDKFGQASTYANSALGGGIVNNIAGGLLGRLFR*
Coding >Pro_DTO377G3_2|g7621.t1
ATGGACCAAGGACAAGGAGGCCAAGGCGAGCTCAACTGGCGCCTCAGCGCGCACCCGATCACGCTACTTGTCTTC
TTAAGTATTCGGATCGGCGCGCTACTGATGTATCTATTTGGTGTACTCTTCATCAACAACTTTATCCTCGTCTTC
ATTTTCACCCTTCTCCTCCTCTCCGCGGATTTCTATTACCTCAAAAACATCGCGGGACGCCGGCTGGTCGGCCTA
CGTTGGTGGAACGAGGTCGACACCTCAACCGGCGACTCACAGTGGGTCTTCGAATCAGCCGACCCTAACGTTCGC
ACTATAACCGCCACCGACAAGCGGTTCTTCTGGCTGAGCTTATATGTCACACCAGCTCTGTGGGTAGCCCTTGCC
ATATTGGCTATTGTGAGACTTGTCGGTGTCATTTGGCTTAGTTTGATTGTTATTGCACTCATCTTGACTATCACG
AATACCATGGCCTTCTCTCGCTGTGATAAATTTGGTCAGGCCTCGACATATGCCAACTCGGCTCTGGGTGGTGGT
ATTGTGAACAACATCGCTGGTGGCCTGCTGGGCAGGCTATTCCGGTAA
Transcript >Pro_DTO377G3_2|g7621.t1
ATGGACCAAGGACAAGGAGGCCAAGGCGAGCTCAACTGGCGCCTCAGCGCGCACCCGATCACGCTACTTGTCTTC
TTAAGTATTCGGATCGGCGCGCTACTGATGTATCTATTTGGTGTACTCTTCATCAACAACTTTATCCTCGTCTTC
ATTTTCACCCTTCTCCTCCTCTCCGCGGATTTCTATTACCTCAAAAACATCGCGGGACGCCGGCTGGTCGGCCTA
CGTTGGTGGAACGAGGTCGACACCTCAACCGGCGACTCACAGTGGGTCTTCGAATCAGCCGACCCTAACGTTCGC
ACTATAACCGCCACCGACAAGCGGTTCTTCTGGCTGAGCTTATATGTCACACCAGCTCTGTGGGTAGCCCTTGCC
ATATTGGCTATTGTGAGACTTGTCGGTGTCATTTGGCTTAGTTTGATTGTTATTGCACTCATCTTGACTATCACG
AATACCATGGCCTTCTCTCGCTGTGATAAATTTGGTCAGGCCTCGACATATGCCAACTCGGCTCTGGGTGGTGGT
ATTGTGAACAACATCGCTGGTGGCCTGCTGGGCAGGCTATTCCGGTAA
Gene >Pro_DTO377G3_2|g7621.t1
ATGGACCAAGGACAAGGAGGCCAAGGCGAGCTCAACTGGCGCCTCAGCGCGCACCCGATCACGCTACTTGTCTTC
TTAAGTATTCGGATCGGTCCGTATTCCCCCACCCCGAGTAAAAGCAGCAAGAATGATTTGGCTAACTTCATGATT
AGGCGCGCTACTGATGTATCTATTTGGTGTACTCTTCATCAACAACTTGTACGGAACCTGCGAACTACCCGCCTG
TCAACCTGCGATGCTAACGTTCATGTAGTATCCTCGTCTTCATTTTCACCCTTCTCCTCCTCTCCGCGGATTTCT
ATTACCTCAAAAACATCGCGGGACGCCGGCTGGTCGGCCTACGTTGGTGGAACGAGGTCGACACCTCAACCGGCG
ACTCACAGTGGGTCTTCGAATCAGCCGACCCTAACGTTCGCACTATAACCGCCACCGACAAGCGGTTCTTCTGGC
TGAGCTTATATGTCACACCAGCTCTGTGGGTAGCCCTTGCCATATTGGCTATTGTGAGACTTGTCGGTGTCATTT
GGCTTAGTTTGATTGGTAAGTTACTCCCAAGATACTTTGATATATGCCGGCAGTAGATATTGACTTTGGTTTAGT
TATTGCACTCATCTTGACTATCACGAATACCATGGCCTTCTCTCGCTGTGATAAATTTGGTCAGGCCTCGACATA
TGCCAACTCGGCTCTGGGTGGTGGTATTGTGAACAACATCGCTGGTGGCCTGCTGGGCAGGCTATTCCGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail