Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g7621.t1
Gene name
Location	scaffold_24:339049..339797
Strand	-
Gene length (bp)	748
Transcript length (bp)	573
Coding sequence length (bp)	573
Protein length (aa)	191

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05832	DUF846	Eukaryotic protein of unknown function (DUF846)	1.8E-47	18	158

GO

GO Term	Description	Terminal node
GO:0016021	integral component of membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No
GO:0031224	intrinsic component of membrane	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 16	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	21	43	22
2	47	64	17
3	110	129	19
4	133	155	22
5	167	189	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g7621.t1 MDQGQGGQGELNWRLSAHPITLLVFLSIRIGALLMYLFGVLFINNFILVFIFTLLLLSADFYYLKNIAGRRLVGL RWWNEVDTSTGDSQWVFESADPNVRTITATDKRFFWLSLYVTPALWVALAILAIVRLVGVIWLSLIVIALILTIT NTMAFSRCDKFGQASTYANSALGGGIVNNIAGGLLGRLFR*
Coding	>Pro_DTO377G3_2\|g7621.t1 ATGGACCAAGGACAAGGAGGCCAAGGCGAGCTCAACTGGCGCCTCAGCGCGCACCCGATCACGCTACTTGTCTTC TTAAGTATTCGGATCGGCGCGCTACTGATGTATCTATTTGGTGTACTCTTCATCAACAACTTTATCCTCGTCTTC ATTTTCACCCTTCTCCTCCTCTCCGCGGATTTCTATTACCTCAAAAACATCGCGGGACGCCGGCTGGTCGGCCTA CGTTGGTGGAACGAGGTCGACACCTCAACCGGCGACTCACAGTGGGTCTTCGAATCAGCCGACCCTAACGTTCGC ACTATAACCGCCACCGACAAGCGGTTCTTCTGGCTGAGCTTATATGTCACACCAGCTCTGTGGGTAGCCCTTGCC ATATTGGCTATTGTGAGACTTGTCGGTGTCATTTGGCTTAGTTTGATTGTTATTGCACTCATCTTGACTATCACG AATACCATGGCCTTCTCTCGCTGTGATAAATTTGGTCAGGCCTCGACATATGCCAACTCGGCTCTGGGTGGTGGT ATTGTGAACAACATCGCTGGTGGCCTGCTGGGCAGGCTATTCCGGTAA
Transcript	>Pro_DTO377G3_2\|g7621.t1 ATGGACCAAGGACAAGGAGGCCAAGGCGAGCTCAACTGGCGCCTCAGCGCGCACCCGATCACGCTACTTGTCTTC TTAAGTATTCGGATCGGCGCGCTACTGATGTATCTATTTGGTGTACTCTTCATCAACAACTTTATCCTCGTCTTC ATTTTCACCCTTCTCCTCCTCTCCGCGGATTTCTATTACCTCAAAAACATCGCGGGACGCCGGCTGGTCGGCCTA CGTTGGTGGAACGAGGTCGACACCTCAACCGGCGACTCACAGTGGGTCTTCGAATCAGCCGACCCTAACGTTCGC ACTATAACCGCCACCGACAAGCGGTTCTTCTGGCTGAGCTTATATGTCACACCAGCTCTGTGGGTAGCCCTTGCC ATATTGGCTATTGTGAGACTTGTCGGTGTCATTTGGCTTAGTTTGATTGTTATTGCACTCATCTTGACTATCACG AATACCATGGCCTTCTCTCGCTGTGATAAATTTGGTCAGGCCTCGACATATGCCAACTCGGCTCTGGGTGGTGGT ATTGTGAACAACATCGCTGGTGGCCTGCTGGGCAGGCTATTCCGGTAA
Gene	>Pro_DTO377G3_2\|g7621.t1 ATGGACCAAGGACAAGGAGGCCAAGGCGAGCTCAACTGGCGCCTCAGCGCGCACCCGATCACGCTACTTGTCTTC TTAAGTATTCGGATCGGTCCGTATTCCCCCACCCCGAGTAAAAGCAGCAAGAATGATTTGGCTAACTTCATGATT AGGCGCGCTACTGATGTATCTATTTGGTGTACTCTTCATCAACAACTTGTACGGAACCTGCGAACTACCCGCCTG TCAACCTGCGATGCTAACGTTCATGTAGTATCCTCGTCTTCATTTTCACCCTTCTCCTCCTCTCCGCGGATTTCT ATTACCTCAAAAACATCGCGGGACGCCGGCTGGTCGGCCTACGTTGGTGGAACGAGGTCGACACCTCAACCGGCG ACTCACAGTGGGTCTTCGAATCAGCCGACCCTAACGTTCGCACTATAACCGCCACCGACAAGCGGTTCTTCTGGC TGAGCTTATATGTCACACCAGCTCTGTGGGTAGCCCTTGCCATATTGGCTATTGTGAGACTTGTCGGTGTCATTT GGCTTAGTTTGATTGGTAAGTTACTCCCAAGATACTTTGATATATGCCGGCAGTAGATATTGACTTTGGTTTAGT TATTGCACTCATCTTGACTATCACGAATACCATGGCCTTCTCTCGCTGTGATAAATTTGGTCAGGCCTCGACATA TGCCAACTCGGCTCTGGGTGGTGGTATTGTGAACAACATCGCTGGTGGCCTGCTGGGCAGGCTATTCCGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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