Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7610.t1
Gene name
Locationscaffold_24:307734..309152
Strand+
Gene length (bp)1418
Transcript length (bp)951
Coding sequence length (bp)951
Protein length (aa) 317

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 1.3E-04 9 44
PF00400 WD40 WD domain, G-beta repeat 1.9E-06 55 90
PF00400 WD40 WD domain, G-beta repeat 3.2E-09 95 133
PF00400 WD40 WD domain, G-beta repeat 4.4E-05 138 177
PF00400 WD40 WD domain, G-beta repeat 4.1E-06 188 220
PF00400 WD40 WD domain, G-beta repeat 1.7E-01 287 310

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 54 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7610.t1
MAEQLVLRGTLEGHNGWVTSLATSLENPNMLLSASRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDG
AYALSASWDKSLRLWELSTGNTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKFTITEKGHTEW
VSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESK
HLYSLSAGDEIHALVFSPNRYWLCAATSSSITIFDLEKKSKVDELKPEFVEKGKKSRDPECISLAWSADGQTLFA
GYTDNKIRAWGVMSRA*
Coding >Pro_DTO377G3_2|g7610.t1
ATGGCTGAGCAGCTGGTTCTTCGCGGCACCCTTGAGGGCCACAATGGCTGGGTTACTTCCCTCGCCACCTCCCTG
GAGAACCCCAACATGCTGCTGTCCGCTTCCCGCGACAAGACCCTGATCATCTGGAACCTCACCCGTGATGAGCAG
GCCTACGGTTACCCCAAGCGCAGCCTCGAGGGTCACTCGCACATCGTCTCTGACTGTGTGATCTCCTCCGATGGT
GCCTACGCTCTGTCCGCTTCGTGGGATAAGTCTCTCCGTCTCTGGGAGCTGTCCACCGGTAACACCACCCGCACT
TTCGTCGGCCACACCAACGATGTTCTGTCCGTCTCGTTCTCCGCCGACAACCGTCAGATCGTCTCCGGTTCCCGT
GATCGCTCCATCAAGTTGTGGAACACCCTTGGTGACTGCAAGTTCACCATCACCGAGAAGGGCCACACCGAGTGG
GTTTCCTGCGTTCGCTTCAGCCCCAACCCCCAGAACCCCGTCATTGTCTCCGCTGGCTGGGACAAGCTCGTCAAG
GTTTGGGAGCTCGCTTCTTGCCGTCTCCAGACCGACCACATCGGTCACACCGGATACATCAACACTGTCACTATC
TCCCCCGACGGATCCCTCTGCGCCTCCGGTGGCAAGGACGGTACCACCATGCTCTGGGATCTTAACGAGTCCAAG
CACCTCTACTCCCTCTCCGCTGGCGATGAGATCCACGCTCTCGTCTTCTCCCCCAACCGCTACTGGCTGTGCGCT
GCCACCAGCAGCTCCATCACCATCTTCGACCTCGAGAAGAAGAGCAAGGTTGATGAGCTCAAGCCCGAGTTCGTT
GAGAAGGGCAAGAAGAGCCGTGACCCCGAGTGCATCAGCTTGGCCTGGTCCGCTGACGGCCAGACCCTGTTCGCC
GGTTACACCGACAACAAGATCCGTGCCTGGGGTGTTATGTCGCGCGCATAG
Transcript >Pro_DTO377G3_2|g7610.t1
ATGGCTGAGCAGCTGGTTCTTCGCGGCACCCTTGAGGGCCACAATGGCTGGGTTACTTCCCTCGCCACCTCCCTG
GAGAACCCCAACATGCTGCTGTCCGCTTCCCGCGACAAGACCCTGATCATCTGGAACCTCACCCGTGATGAGCAG
GCCTACGGTTACCCCAAGCGCAGCCTCGAGGGTCACTCGCACATCGTCTCTGACTGTGTGATCTCCTCCGATGGT
GCCTACGCTCTGTCCGCTTCGTGGGATAAGTCTCTCCGTCTCTGGGAGCTGTCCACCGGTAACACCACCCGCACT
TTCGTCGGCCACACCAACGATGTTCTGTCCGTCTCGTTCTCCGCCGACAACCGTCAGATCGTCTCCGGTTCCCGT
GATCGCTCCATCAAGTTGTGGAACACCCTTGGTGACTGCAAGTTCACCATCACCGAGAAGGGCCACACCGAGTGG
GTTTCCTGCGTTCGCTTCAGCCCCAACCCCCAGAACCCCGTCATTGTCTCCGCTGGCTGGGACAAGCTCGTCAAG
GTTTGGGAGCTCGCTTCTTGCCGTCTCCAGACCGACCACATCGGTCACACCGGATACATCAACACTGTCACTATC
TCCCCCGACGGATCCCTCTGCGCCTCCGGTGGCAAGGACGGTACCACCATGCTCTGGGATCTTAACGAGTCCAAG
CACCTCTACTCCCTCTCCGCTGGCGATGAGATCCACGCTCTCGTCTTCTCCCCCAACCGCTACTGGCTGTGCGCT
GCCACCAGCAGCTCCATCACCATCTTCGACCTCGAGAAGAAGAGCAAGGTTGATGAGCTCAAGCCCGAGTTCGTT
GAGAAGGGCAAGAAGAGCCGTGACCCCGAGTGCATCAGCTTGGCCTGGTCCGCTGACGGCCAGACCCTGTTCGCC
GGTTACACCGACAACAAGATCCGTGCCTGGGGTGTTATGTCGCGCGCATAG
Gene >Pro_DTO377G3_2|g7610.t1
ATGGCTGAGCAGCTGGTTCTTCGCGGCACCCTTGAGGGCCACAATGGCTGGGTTACTTCCCTCGCCACCTCCCTG
GAGAAGTAAGAGTGACCTATCCCGATCGGGGGATTGAATTTTTGAAGGGACAAAATTCTGACTTGAATGTTTGAT
AATAGCCCCAACATGCTGCTGTCCGCTTCCCGCGACAAGACCCTGATCATCTGGAACCTCACCCGTGATGAGCAG
GCCTACGGTTACCCCAAGCGCAGCCTCGAGGGTCACTCGCACATCGTCTCTGACTGTGTACGTTTTTCTTCTCCC
GAATGAACCACACCCACAAGCCATTGGATGCGACACATGGATTTGGATGGCGCATTTCGGAAAAAAAAAAAAGAT
GGAATGGTTTTGGCTGACCGATGGTCTTGTCTGCGTTATAGGTGATCTCCTCCGATGGTGCCTACGCTCTGTCCG
CTTCGTGGGATAAGTCTCTCCGTCTCTGGGAGCTGTCCACCGGTAACACCACCCGCACTTTCGTCGGCCACACCA
ACGATGTTCTGTCCGTCTCGTTCTCCGCCGACAACCGTCAGATCGTCTCCGGTTCCCGTGATCGCTCCATCAAGT
TGTGGAACACCCTTGGTGACTGCAAGTTCACCATCACCGAGAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCT
TCAGCCCCAACCCCCAGAACCCCGTCATTGTCTCCGCTGGCTGGGACAAGCTCGTCAAGGTACGCTATCGACTCC
GAATTTTCCTACACAATTTCCTCCCCACCTTGCTTTGCCCGCGTGATGTTTGCATAAACGTATTTGCTACTTCAG
AGCCCTTCGGGGCCATGAGACAATTTTTCACCCAATTTGCCTGATGGGCACAGCAACAATTTTTTTGTTTTTTTA
AATCGAACGAGAGAAGGATTGGAAAAATTTTTCCTTGACACTTGACATTCTTTTTTTGAGGGTATCGACGCTAAC
ATTCGATCCGCGTCTAGGTTTGGGAGCTCGCTTCTTGCCGTCTCCAGACCGACCACATCGGTCACACCGGATACA
TCAACACTGTCACTATCTCCCCCGACGGATCCCTCTGCGCCTCCGGTGGCAAGGACGGTACCACCATGCTCTGGG
ATCTTAACGAGTCCAAGCACCTCTACTCCCTCTCCGCTGGCGATGAGATCCACGCTCTCGTCTTCTCCCCCAACC
GCTACTGGCTGTGCGCTGCCACCAGCAGCTCCATCACCATCTTCGACCTCGAGAAGAAGAGCAAGGTTGATGAGC
TCAAGCCCGAGTTCGTTGAGAAGGGCAAGAAGAGCCGTGACCCCGAGTGCATCAGCTTGGCCTGGTCCGCTGACG
GCCAGACCCTGTTCGCCGGTTACACCGACAACAAGATCCGTGCCTGGGGTGTTATGTCGCGCGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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