Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7608.t1
Gene name
Locationscaffold_24:304653..305595
Strand+
Gene length (bp)942
Transcript length (bp)660
Coding sequence length (bp)660
Protein length (aa) 220

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01105 EMP24_GP25L emp24/gp25L/p24 family/GOLD 9.0E-40 37 214

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 187 209 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7608.t1
MGTSPITLRAIFSFLFVFVQLASALKFDLIATSGSGKNERCIRNFVSKDQLVVVTAIVGGTKGDGQRVNIHIKDA
MGNDYGRPKDVVGETRQLFTSPADTAFDVCFENQLVGHNTIQNPSRPVELDVDIGADARDWNSIQSQEKLKPVET
DLRRIEEMVADIVTEMEYLRAREQRLRDTNESTNERVKWFAFGTMGMLIGLGAWQVVYLRAYFRSKHLI*
Coding >Pro_DTO377G3_2|g7608.t1
ATGGGCACCTCACCAATTACGCTGAGGGCCATCTTCAGCTTCCTTTTTGTCTTCGTCCAGCTTGCCAGCGCGCTA
AAATTCGACCTGATCGCCACCTCCGGCAGCGGCAAGAACGAGCGATGCATTCGCAACTTCGTCTCTAAGGACCAG
CTGGTCGTTGTCACTGCCATCGTTGGCGGTACGAAGGGTGACGGCCAGAGGGTCAACATTCATATCAAGGACGCT
ATGGGCAATGACTACGGTCGCCCTAAGGATGTCGTCGGAGAGACACGTCAGCTTTTCACTTCGCCCGCGGACACG
GCTTTCGACGTCTGCTTCGAGAACCAGCTTGTCGGCCACAACACCATCCAGAACCCCTCCCGCCCCGTCGAACTC
GACGTCGACATTGGCGCCGACGCCCGCGACTGGAACAGCATTCAGTCGCAGGAGAAGCTCAAGCCCGTTGAAACA
GACCTACGCCGCATCGAGGAGATGGTCGCCGATATCGTGACTGAGATGGAGTACCTGCGTGCGCGTGAGCAGCGT
CTGCGTGATACCAATGAGAGCACCAACGAGCGCGTGAAGTGGTTCGCTTTCGGAACTATGGGCATGCTTATCGGG
CTTGGTGCTTGGCAGGTTGTTTACCTGAGAGCTTACTTCAGATCTAAGCATCTTATCTAG
Transcript >Pro_DTO377G3_2|g7608.t1
ATGGGCACCTCACCAATTACGCTGAGGGCCATCTTCAGCTTCCTTTTTGTCTTCGTCCAGCTTGCCAGCGCGCTA
AAATTCGACCTGATCGCCACCTCCGGCAGCGGCAAGAACGAGCGATGCATTCGCAACTTCGTCTCTAAGGACCAG
CTGGTCGTTGTCACTGCCATCGTTGGCGGTACGAAGGGTGACGGCCAGAGGGTCAACATTCATATCAAGGACGCT
ATGGGCAATGACTACGGTCGCCCTAAGGATGTCGTCGGAGAGACACGTCAGCTTTTCACTTCGCCCGCGGACACG
GCTTTCGACGTCTGCTTCGAGAACCAGCTTGTCGGCCACAACACCATCCAGAACCCCTCCCGCCCCGTCGAACTC
GACGTCGACATTGGCGCCGACGCCCGCGACTGGAACAGCATTCAGTCGCAGGAGAAGCTCAAGCCCGTTGAAACA
GACCTACGCCGCATCGAGGAGATGGTCGCCGATATCGTGACTGAGATGGAGTACCTGCGTGCGCGTGAGCAGCGT
CTGCGTGATACCAATGAGAGCACCAACGAGCGCGTGAAGTGGTTCGCTTTCGGAACTATGGGCATGCTTATCGGG
CTTGGTGCTTGGCAGGTTGTTTACCTGAGAGCTTACTTCAGATCTAAGCATCTTATCTAG
Gene >Pro_DTO377G3_2|g7608.t1
ATGGGCACCTCACCAATTACGCTGAGGGCCATCTTCAGCTTCCTTTTTGTCTTCGTCCAGCTTGCCAGCGCGCTA
AAATTCGACCTGATCGCCACCTCCGGCAGCGGCAAGAACGAGCGATGCATTCGCAACTTCGTCTCTAAGGACCAG
CTGGTCGTTGTCACTGCCATCGTTGGCGGTACGAAGGGTGACGGCCAGAGGGTCAACATTCATGTATGTGGACTT
ATGTCTGGATGTGGATGGGAATCCGTCCTGCGTCTGCTGGGACTCGGAGACCAAACCGCCGAATTGCAGATTGCA
GATTGTGGATCGCGACTAATTCTTCCTTTTCTGTGTATAGATCAAGGACGCTATGGGCAATGACTACGGTCGCCC
TAAGGATGTCGTCGGAGAGACACGTCAGCTTTTCACTTCGCCCGCGGACACGGCTTTCGACGTCTGCTTCGAGAA
CCAGCTTGTCGGCCACAGTAAGTGGTAGCCCTTTGCACAACACCAACAATGCACCGAAGAAAAGGCGGAGTTAAA
GATATTGTCATGCTAAATCAACATTACCCCATCAGACACCATCCAGAACCCCTCCCGCCCCGTCGAACTCGACGT
CGACATTGGCGCCGACGCCCGCGACTGGAACAGCATTCAGTCGCAGGAGAAGCTCAAGCCCGTTGAAACAGACCT
ACGCCGCATCGAGGAGATGGTCGCCGATATCGTGACTGAGATGGAGTACCTGCGTGCGCGTGAGCAGCGTCTGCG
TGATACCAATGAGAGCACCAACGAGCGCGTGAAGTGGTTCGCTTTCGGAACTATGGGCATGCTTATCGGGCTTGG
TGCTTGGCAGGTTGTTTACCTGAGAGCTTACTTCAGGTATGTGAAATTATGGTTGTGGTGGAAGGTGGAGTTGGT
TACTGACAATTTGGTTCCTGTAGATCTAAGCATCTTATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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