Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g760.t1
Gene name
Locationscaffold_01:1970416..1974225
Strand+
Gene length (bp)3809
Transcript length (bp)2568
Coding sequence length (bp)2568
Protein length (aa) 856

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 2.7E-07 230 274

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 4.29 1.66 6.91
5d_25C Five days - 25 degrees Celsius 8.58 4.12 13.05
7d_25C Seven days - 25 degrees Celsius 11.94 6.22 17.65
10d_25C Ten days - 25 degrees Celsius 15.84 8.75 22.93
7d_15C Seven days - 15 degrees Celsius 3.54 1.24 5.84
7d_30C Seven days - 30 degrees Celsius 8.75 4.17 13.34

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.024417 yes
3d_25C 7d_25C 0.000700 yes
3d_25C 7d_15C 0.663439 no
3d_25C 7d_30C 0.019624 yes
3d_25C 10d_25C 0.000700 yes
5d_25C 7d_25C 0.262882 no
5d_25C 7d_15C 0.007091 yes
5d_25C 7d_30C 0.966695 no
5d_25C 10d_25C 0.018560 yes
7d_25C 7d_15C 0.000700 yes
7d_25C 7d_30C 0.296486 no
7d_25C 10d_25C 0.306203 no
7d_15C 7d_30C 0.002761 yes
7d_15C 10d_25C 0.000700 yes
7d_30C 10d_25C 0.022681 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g760.t1
MALLRASAALAVVLMLQSHHAAAWGNSDTLYIYNSDTLADISASEACVNAMSSNVSCYAGLSQAVTQTTSWSANA
LSEMCTSGCSSALSSYVSSVDEACGTSTQYNISGISQTASDRGKEMKWRYDATCLTDSASGTYCNTLFQNAISNG
TTNIKCSACYLEYLSTLVNSKWGQDILLSPSALTSQVSSCSTSGYSVTYTPTSTASSTASASATVAASRCNTTDP
DQTVYKVESGDTCLSISAAQNVSTSALINLNSLDTGCTHIVAGAEICLPDVCEIYRVQETDTIDKIVASLSRQVS
VPQFVAWNANLNSAQSSQNLTAVSGKYICVSPPGTLTLPDTLALRPASTAVSLPTDAVTSSNTDCGHWYQVQDGD
TCESVCDKFSISQYNFNFLNPQAALNATSSCGSLWKGNSYCVQAVGNINTYTSYISNTTRTRTSLASTMNLNATR
TANHSTTNLFWSFPSDLTTASTWTPDSAYLASLATYTLCDQVNSVYNITDDDLTDEMYHDEVWLSEYERVCYPPV
NGSFPTTGFNFSITLTDDPSMGSSTNFDAASRAWRHFVREQWVGGDGADQQKRALIERWATADQQFRDSYQSRAP
EDEPSFFEGPELTDKTFGANDVQSSCMVYFYTTELTPEKEALLAKCILGLFPWEDGWDFLADEMIVFVPPEDNKG
NVLETFKFYQSVARPNFLDMHMALDGTVLFRDCSPKLIIDDRTLETGLGLWVDFTTNGIYEIARRGQIMMEEFAY
FYREIGPGNRVPIDQALNYIEDREIYIDRDEDADPREILEDEPVDMRRPLVEIYKGNEVDLVDDYAPGFREAEEQ
GDGLAIGFDLERILANDGNPLIVRDHGSDH*
Coding >Pro_DTO377G3_2|g760.t1
ATGGCACTCTTGAGGGCAAGTGCTGCATTGGCAGTAGTTCTGATGCTACAGTCTCATCATGCCGCTGCTTGGGGA
AATTCAGACACTCTCTACATTTACAACTCTGATACTCTGGCTGATATATCAGCTTCAGAAGCATGCGTGAATGCC
ATGTCCAGCAATGTTTCATGCTATGCCGGCTTGAGCCAGGCAGTCACCCAGACGACATCATGGTCAGCCAATGCA
CTGTCGGAAATGTGTACCAGCGGTTGCTCTTCCGCTTTGTCAAGCTATGTCTCCTCTGTGGACGAAGCCTGCGGC
ACAAGTACGCAGTACAACATCTCCGGTATCTCACAAACTGCCTCGGATAGAGGCAAAGAAATGAAATGGCGTTAC
GATGCAACCTGCTTGACTGATTCGGCTTCGGGCACCTATTGCAACACCCTATTCCAAAATGCAATTTCGAATGGC
ACAACAAACATCAAATGCAGCGCATGCTATTTGGAGTATTTGTCAACCCTAGTGAATTCCAAATGGGGTCAGGAT
ATTTTGCTCAGTCCGTCGGCCTTAACGAGTCAAGTATCTTCTTGCTCGACCAGCGGATACTCTGTGACTTATACA
CCAACCTCGACTGCCTCTTCCACGGCCTCTGCCTCGGCCACTGTTGCCGCTAGTCGCTGCAACACGACTGACCCC
GATCAAACTGTTTACAAGGTTGAATCCGGAGATACCTGTCTTTCTATCTCAGCAGCTCAAAATGTCTCAACCTCA
GCCTTGATAAACTTGAACAGCCTTGATACGGGGTGTACGCATATAGTTGCTGGGGCAGAGATTTGCCTTCCCGAT
GTTTGTGAGATCTATCGCGTTCAGGAGACGGATACCATTGACAAAATCGTTGCGAGCCTATCGCGTCAAGTCTCT
GTGCCTCAGTTTGTTGCATGGAATGCCAATCTCAACTCAGCGCAAAGCTCGCAGAATCTGACGGCTGTTTCGGGG
AAGTACATCTGCGTCAGTCCTCCGGGTACTCTCACACTCCCCGATACCCTGGCTCTTAGGCCCGCAAGCACCGCT
GTGTCTCTTCCTACCGACGCAGTCACTAGCTCCAACACCGACTGTGGTCACTGGTATCAGGTCCAAGATGGTGAT
ACCTGTGAATCCGTGTGCGACAAATTCAGCATCTCTCAATATAATTTCAATTTCTTAAATCCCCAGGCCGCATTG
AATGCAACCTCCAGTTGCGGCAGCCTCTGGAAAGGGAACAGCTACTGCGTTCAAGCAGTGGGTAACATCAACACC
TATACAAGCTACATATCCAACACCACAAGAACACGCACATCACTTGCTAGCACCATGAATCTCAACGCAACCCGA
ACAGCAAACCATAGCACCACCAATCTGTTCTGGTCATTCCCTTCCGACCTAACCACGGCCTCAACCTGGACCCCT
GATTCAGCATACCTCGCATCTCTCGCGACCTACACTCTCTGCGACCAGGTCAACTCAGTGTACAACATCACCGAT
GACGATCTAACAGACGAGATGTACCACGATGAAGTCTGGCTAAGTGAATACGAGCGCGTGTGCTATCCTCCCGTG
AACGGTTCTTTCCCGACCACCGGGTTCAACTTCAGCATTACATTGACCGATGATCCAAGTATGGGAAGCTCGACG
AATTTTGATGCCGCCTCTCGTGCATGGAGGCATTTTGTTCGTGAGCAGTGGGTCGGTGGCGACGGCGCGGATCAA
CAGAAACGAGCGTTGATCGAACGCTGGGCAACAGCAGACCAACAATTCCGCGATAGCTATCAATCACGAGCCCCA
GAGGACGAGCCTAGTTTTTTTGAAGGTCCTGAACTTACGGATAAAACTTTCGGAGCCAATGACGTTCAAAGTTCC
TGCATGGTCTACTTCTACACCACCGAATTAACCCCCGAGAAAGAAGCCCTGCTCGCCAAGTGTATCCTGGGATTA
TTCCCATGGGAAGACGGCTGGGACTTTCTAGCAGACGAAATGATAGTATTTGTTCCCCCTGAAGACAATAAGGGG
AATGTTCTCGAGACATTTAAATTCTATCAAAGTGTCGCGCGACCCAACTTCCTCGATATGCACATGGCGCTTGAT
GGAACTGTACTTTTCAGAGACTGCTCCCCCAAGCTTATTATCGATGACCGGACCCTTGAGACCGGACTAGGTCTC
TGGGTTGATTTTACAACCAACGGTATCTACGAGATAGCCCGTCGGGGTCAAATTATGATGGAGGAATTCGCCTAC
TTTTATCGGGAAATCGGTCCGGGAAATCGAGTCCCAATAGACCAGGCGCTCAATTACATTGAGGACCGGGAAATT
TACATAGACCGCGACGAAGATGCAGATCCAAGAGAGATTTTGGAGGATGAACCAGTCGATATGCGACGGCCGCTT
GTGGAAATCTACAAAGGGAATGAAGTCGATCTGGTGGATGACTATGCGCCAGGATTTCGCGAGGCGGAGGAGCAG
GGTGACGGTTTAGCGATCGGATTTGATTTGGAAAGGATACTTGCGAACGATGGAAATCCCCTGATTGTCAGAGAT
CATGGAAGTGACCATTAG
Transcript >Pro_DTO377G3_2|g760.t1
ATGGCACTCTTGAGGGCAAGTGCTGCATTGGCAGTAGTTCTGATGCTACAGTCTCATCATGCCGCTGCTTGGGGA
AATTCAGACACTCTCTACATTTACAACTCTGATACTCTGGCTGATATATCAGCTTCAGAAGCATGCGTGAATGCC
ATGTCCAGCAATGTTTCATGCTATGCCGGCTTGAGCCAGGCAGTCACCCAGACGACATCATGGTCAGCCAATGCA
CTGTCGGAAATGTGTACCAGCGGTTGCTCTTCCGCTTTGTCAAGCTATGTCTCCTCTGTGGACGAAGCCTGCGGC
ACAAGTACGCAGTACAACATCTCCGGTATCTCACAAACTGCCTCGGATAGAGGCAAAGAAATGAAATGGCGTTAC
GATGCAACCTGCTTGACTGATTCGGCTTCGGGCACCTATTGCAACACCCTATTCCAAAATGCAATTTCGAATGGC
ACAACAAACATCAAATGCAGCGCATGCTATTTGGAGTATTTGTCAACCCTAGTGAATTCCAAATGGGGTCAGGAT
ATTTTGCTCAGTCCGTCGGCCTTAACGAGTCAAGTATCTTCTTGCTCGACCAGCGGATACTCTGTGACTTATACA
CCAACCTCGACTGCCTCTTCCACGGCCTCTGCCTCGGCCACTGTTGCCGCTAGTCGCTGCAACACGACTGACCCC
GATCAAACTGTTTACAAGGTTGAATCCGGAGATACCTGTCTTTCTATCTCAGCAGCTCAAAATGTCTCAACCTCA
GCCTTGATAAACTTGAACAGCCTTGATACGGGGTGTACGCATATAGTTGCTGGGGCAGAGATTTGCCTTCCCGAT
GTTTGTGAGATCTATCGCGTTCAGGAGACGGATACCATTGACAAAATCGTTGCGAGCCTATCGCGTCAAGTCTCT
GTGCCTCAGTTTGTTGCATGGAATGCCAATCTCAACTCAGCGCAAAGCTCGCAGAATCTGACGGCTGTTTCGGGG
AAGTACATCTGCGTCAGTCCTCCGGGTACTCTCACACTCCCCGATACCCTGGCTCTTAGGCCCGCAAGCACCGCT
GTGTCTCTTCCTACCGACGCAGTCACTAGCTCCAACACCGACTGTGGTCACTGGTATCAGGTCCAAGATGGTGAT
ACCTGTGAATCCGTGTGCGACAAATTCAGCATCTCTCAATATAATTTCAATTTCTTAAATCCCCAGGCCGCATTG
AATGCAACCTCCAGTTGCGGCAGCCTCTGGAAAGGGAACAGCTACTGCGTTCAAGCAGTGGGTAACATCAACACC
TATACAAGCTACATATCCAACACCACAAGAACACGCACATCACTTGCTAGCACCATGAATCTCAACGCAACCCGA
ACAGCAAACCATAGCACCACCAATCTGTTCTGGTCATTCCCTTCCGACCTAACCACGGCCTCAACCTGGACCCCT
GATTCAGCATACCTCGCATCTCTCGCGACCTACACTCTCTGCGACCAGGTCAACTCAGTGTACAACATCACCGAT
GACGATCTAACAGACGAGATGTACCACGATGAAGTCTGGCTAAGTGAATACGAGCGCGTGTGCTATCCTCCCGTG
AACGGTTCTTTCCCGACCACCGGGTTCAACTTCAGCATTACATTGACCGATGATCCAAGTATGGGAAGCTCGACG
AATTTTGATGCCGCCTCTCGTGCATGGAGGCATTTTGTTCGTGAGCAGTGGGTCGGTGGCGACGGCGCGGATCAA
CAGAAACGAGCGTTGATCGAACGCTGGGCAACAGCAGACCAACAATTCCGCGATAGCTATCAATCACGAGCCCCA
GAGGACGAGCCTAGTTTTTTTGAAGGTCCTGAACTTACGGATAAAACTTTCGGAGCCAATGACGTTCAAAGTTCC
TGCATGGTCTACTTCTACACCACCGAATTAACCCCCGAGAAAGAAGCCCTGCTCGCCAAGTGTATCCTGGGATTA
TTCCCATGGGAAGACGGCTGGGACTTTCTAGCAGACGAAATGATAGTATTTGTTCCCCCTGAAGACAATAAGGGG
AATGTTCTCGAGACATTTAAATTCTATCAAAGTGTCGCGCGACCCAACTTCCTCGATATGCACATGGCGCTTGAT
GGAACTGTACTTTTCAGAGACTGCTCCCCCAAGCTTATTATCGATGACCGGACCCTTGAGACCGGACTAGGTCTC
TGGGTTGATTTTACAACCAACGGTATCTACGAGATAGCCCGTCGGGGTCAAATTATGATGGAGGAATTCGCCTAC
TTTTATCGGGAAATCGGTCCGGGAAATCGAGTCCCAATAGACCAGGCGCTCAATTACATTGAGGACCGGGAAATT
TACATAGACCGCGACGAAGATGCAGATCCAAGAGAGATTTTGGAGGATGAACCAGTCGATATGCGACGGCCGCTT
GTGGAAATCTACAAAGGGAATGAAGTCGATCTGGTGGATGACTATGCGCCAGGATTTCGCGAGGCGGAGGAGCAG
GGTGACGGTTTAGCGATCGGATTTGATTTGGAAAGGATACTTGCGAACGATGGAAATCCCCTGATTGTCAGAGAT
CATGGAAGTGACCATTAG
Gene >Pro_DTO377G3_2|g760.t1
ATGGCACTCTTGAGGGCAAGTGCTGCATTGGCAGTAGTTCTGATGCTACAGTCTCATCATGCCGCTGCTTGGGGA
AATTCAGACACTCTCTACATTTACAACTCTGATACTCTGGCTGATATATCAGCTTCAGAAGCATGCGTGAATGCC
ATGTCCAGCAATGTTTCATGCTATGCCGGCTTGAGCCAGGCAGTCACCCAGACGACATCATGGTCAGCCAATGCA
CTGTCGGAAATGTGTACCAGCGGTTGCTCTTCCGCTTTGTCAAGCTATGTCTCCTCTGTGGACGAAGCCTGCGGC
ACAAGTACGCAGTACAACATCTCCGGTATCTCACAAACTGCCTCGGATAGAGGCAAAGAAATGAAATGGCGTTAC
GATGCAACCTGCTTGACTGATTCGGCTTCGGGCACCTATTGCAACACCCTATTCCAAAATGCAATTTCGAATGGC
ACAACAAACATCAAATGCAGCGCATGCTATTTGGAGTATTTGTCAACCCTAGTGAATTCCAAATGGGGTCAGGAT
ATTTTGCTCAGTCCGTCGGCCTTAACGAGTCAAGTATCTTCTTGCTCGACCAGCGGATACTCTGTGACTTATACA
CCAACCTCGACTGCCTCTTCCACGGCCTCTGCCTCGGCCACTGTTGCCGCTAGTCGCTGCAACACGACTGACCCC
GATCAAACTGTTTACAAGGTTGAATCCGGAGATACCTGTCTTTCTATCTCAGCAGCTCAAAATGTCTCAACCTCA
GCCTTGATAAACTTGAACAGCCTTGATACGGGGTGTACGCATATAGTTGCTGGGGCAGAGATTTGCCTTCCCGAT
GTTTGTGAGATCTATCGCGTTCAGGAGACGGATACCATTGACAAAATCGTTGCGAGCCTATCGCGTCAAGTCTCT
GTGCCTCAGTTTGTTGCATGGAATGCCAATCTCAACTCAGCGCAAAGCTCGCAGAATCTGACGGCTGTTTCGGGG
AAGTACATCTGCGTCAGTCCTCCGGGTACTCTCACACTCCCCGATACCCTGGCTCTTAGGCCCGCAAGCACCGCT
GTGTATGTTGTCTGCTATTTTGTTTCGCTCGGTTGTTCGGAAAGTGAAAATGCTAATCAAATATACAGGTCTCTT
CCTACCGACGCAGTCACTAGCTCCAACACCGACTGTGGTCACTGGTATCAGGTCCAAGATGGTGATACCTGTGAA
TCCGTGTGCGACAAATTCAGCATCTCTCAATATAATTTCAATTTCTTAAATCCCCAGGCCGCATTGAATGCAACC
TCCAGTTGCGGCAGCCTCTGGAAAGGGAACAGCTACGTACGTCTCTCTACACGAGAAAATAACCAAGACATATCG
TTCTTTTCAGGCTAACCCATCCACTCCACAGTGCGTTCAAGCAGTGGGTAACATCAACACCTATACAAGCTACAT
ATCCAACACCACAAGAACACGCACATCACTTGCTAGCACCATGAATCTCAACGCAACCCGAACAGCAAACCATAG
CACCACCAATCTGTTCTGGTCATTCCCTTCCGACCTAACCACGGCCTCAACCTGGACCCCTGATTCAGCATACCT
CGCATCTCTCGCGACCTACACTCTCTGCGACCAGGTCAACTCAGTGTACAACATCACCGATGACGATCTAACAGA
CGAGATGTACCACGATGAAGTCTGGCTAAGTGAATACGAGCGCGTGTGCTATCCTCCCGTGAACGGTTCTTTCCC
GACCACCGGGTTCAACTTCAGCATTACATTGACCGATGATCCAAGTATGGGAAGCTCGACGGTATTCACTTCTAG
CCAAACAGCTAGCCCTCACGCATCATCTACGGTCACTACGGCGACCTCTACCACAGTTGCGACTCCTACGAGTAC
GATTTCGGAGAACGGTCTCTGTGGCCCGTCTAATTCGGACTGGACTTGTTTGGGATCTCAATTTGGTGACTGCTG
TAGTAACTACGGTTATTGTGGTAGTTCGTCGGAGTATTGTTCCAGCGCCAATTGTAATGCTAAGTATGGCTCGTG
TGGTTGATCTTGGTTTGGGGGTGGGACACTCAATGCCCTAGAGTTCTAAAGTTCACTGTCGGACAAAATTCGGCT
ATGGTCTTCAAGGCATGTCAAATGTTTATATATGCCATATTTTCTTCTAGTTTTAATTACTGGAATATAGAACTG
GGATTTACCAGCTGGCTGTTAACTGGCACATAGTAGTGCATGGAAACCTGGAATTTATGAATATCAAACTTTCGC
TTACATTTCAATGATTTTGGCACAAATTTACAACTTTACAACCAGAATTTTGAAAGCAAGCGGCTAGGCCGGAAA
AGACGCTACTTAGTGCACACCAAGTTTGTGATCGATCCACTTCAACGAAAACCCTTTAAGCCAAAGACCCACTCC
AGGGGTGTATATCCGAGCTCGCAACCACTTAATCTCCCCTATCAAAGCTTAGTCGTAAAGATTCCAAGGTCGCAT
AATACAGGTTTAGTGTGTTTGAGATGAGTTTGTACAGGAACTTTTGAAAATATAACTAGATTTGATGCCTTAGTG
CAAACTTGGGGCGGGCATGTATCAAACTCCGTTAAATACATTCCCGCCCCCCACGTTCCTCACTAAACTTCTTTT
CAACCCCCGGAACTACCACCATTCGATCATGTCCTTAACAAGATCACATAGCCAGTGGCCTAGAGGCATCCCCTC
TTTCATTCGCCGACATGAGGAACCCGTGGCCCGGAAGAATTTTGATGCCGCCTCTCGTGCATGGAGGCATTTTGT
TCGTGAGCAGTGGGTCGGTGGCGACGGCGCGGATCAACAGAAACGAGCGTTGATCGAACGCTGGGCAACAGCAGA
CCAACAATTCCGCGATGTATGTCTTTTGGATAAGAATTTTTATTTTTCACTGACACCATGACAGAGCTATCAATC
ACGAGCCCCAGAGGACGAGCCTAGTTTTTTTGAAGGTCCTGAACTTACGGTATGAAACAATTAAATATATCCTAC
TACCTGACTTATCCTAATCCAAGTATAGGATAAAACTTTCGGAGCCAATGACGTTCAAAGTTCCTGCATGGTCTA
CTTCTACACCACCGAATTAACCCCCGAGAAAGAAGCCCTGCTCGCCAAGTGTATCCTGGGATTATTCCCATGGGA
AGACGGCTGGGACTTTCTAGCAGACGAAATGATAGTATTTGTTCCCCCTGAAGACAATAAGGGGAATGTTCTCGA
GACATTTAAATTCTATCAAAGTGTCGCGCGACCCAACTTCCTCGATATGCACATGGCGCTTGATGGAACTGTACT
TTTCAGAGACTGCTCCCCCAAGCTTATTATCGATGACCGGACCCTTGAGACCGGACTAGGTCTCTGGGTTGATTT
TACAACCAACGGTATCTACGAGATAGCCCGTCGGGGTCAAATTATGATGGAGGAATTCGCCTACTTTTATCGGGA
AATCGGTCCGGGAAATCGAGTCCCAATAGACCAGGCGCTCAATTACATTGAGGACCGGGAAATTTACATAGACCG
CGACGAAGATGCAGATCCAAGAGAGATTTTGGAGGATGAACCGTGAGTCTGTCCATTCTTGGTTACGAGATGGTT
TATGTTAATTGGTGCTTAGAGTCGATATGCGACGGCCGCTTGTGGAAATCTACAAAGGGAATGAAGTCGATCTGG
TGGATGACTATGCGCCAGGATTTCGCGAGGCGGAGGAGCAGGGTGACGGTTTAGCGATCGGATTTGATTTGGAAA
GGATACTTGCGAACGATGGAAATCCCCTGATTGTCAGAGATCATGGAAGTGACCATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail