Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7597.t1
Gene name
Locationscaffold_24:271139..271867
Strand+
Gene length (bp)728
Transcript length (bp)579
Coding sequence length (bp)579
Protein length (aa) 193

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00702 Hydrolase haloacid dehalogenase-like hydrolase 4.0E-12 18 143
PF13419 HAD_2 Haloacid dehalogenase-like hydrolase 3.0E-10 30 147
PF13242 Hydrolase_like HAD-hyrolase-like 2.9E-05 105 153

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7597.t1
MFRQMREALGIDSSVDILHHIRQLPTEEQPTAVSKVQAVERRAMADQQPQPGLVLLMDYLESRGVRRALCTRNFE
APVQNLIDNHLNGHVFLPIITRDTPNLLPKPDPAGILHIASEWGLDDGRNLIMVGDSIDDMTAGHMAGAATVLLL
NEHNVHLKEHPHTDLCIKQLSDLIDVLEAGFVGTRENDEHGA*
Coding >Pro_DTO377G3_2|g7597.t1
ATGTTCCGTCAGATGAGAGAAGCACTAGGAATCGACAGCTCCGTCGATATCCTCCACCACATCCGCCAACTCCCC
ACCGAAGAACAACCCACAGCCGTATCGAAGGTGCAAGCAGTAGAGCGCCGAGCCATGGCCGACCAGCAGCCGCAG
CCCGGCCTGGTTCTCCTAATGGACTACCTTGAATCCCGCGGCGTACGACGAGCGCTCTGCACACGGAACTTCGAA
GCACCAGTCCAGAACCTGATTGACAATCATCTCAACGGTCATGTCTTCCTACCAATCATCACGCGGGACACGCCA
AATCTCCTGCCCAAGCCTGATCCCGCCGGCATTCTGCATATTGCGAGTGAATGGGGTCTTGATGATGGTCGGAAT
TTGATCATGGTTGGTGATAGCATTGATGATATGACGGCTGGGCATATGGCTGGCGCTGCGACGGTGTTGCTTTTG
AATGAGCATAATGTGCATTTGAAGGAACATCCGCATACGGATCTTTGCATTAAGCAGCTATCTGATTTGATCGAT
GTTCTGGAGGCAGGATTTGTCGGGACTAGAGAGAACGATGAGCATGGCGCGTGA
Transcript >Pro_DTO377G3_2|g7597.t1
ATGTTCCGTCAGATGAGAGAAGCACTAGGAATCGACAGCTCCGTCGATATCCTCCACCACATCCGCCAACTCCCC
ACCGAAGAACAACCCACAGCCGTATCGAAGGTGCAAGCAGTAGAGCGCCGAGCCATGGCCGACCAGCAGCCGCAG
CCCGGCCTGGTTCTCCTAATGGACTACCTTGAATCCCGCGGCGTACGACGAGCGCTCTGCACACGGAACTTCGAA
GCACCAGTCCAGAACCTGATTGACAATCATCTCAACGGTCATGTCTTCCTACCAATCATCACGCGGGACACGCCA
AATCTCCTGCCCAAGCCTGATCCCGCCGGCATTCTGCATATTGCGAGTGAATGGGGTCTTGATGATGGTCGGAAT
TTGATCATGGTTGGTGATAGCATTGATGATATGACGGCTGGGCATATGGCTGGCGCTGCGACGGTGTTGCTTTTG
AATGAGCATAATGTGCATTTGAAGGAACATCCGCATACGGATCTTTGCATTAAGCAGCTATCTGATTTGATCGAT
GTTCTGGAGGCAGGATTTGTCGGGACTAGAGAGAACGATGAGCATGGCGCGTGA
Gene >Pro_DTO377G3_2|g7597.t1
ATGTTCCGTCAGATGAGGTATGCTCTACTGCCTGCGAGCCATTCAAACCCCTCTGTAACAAATATTCCACTATAG
AGAAGCACTAGGAATCGACAGCTCCGTCGATATCCTCCACCACATCCGCCAACTCCCCACCGAAGAACAACCCAC
AGCCGTATCGAAGGTGCAAGCAGTAGAGCGCCGAGCCATGGCCGACCAGCAGCCGCAGCCCGGCCTGGTTCTCCT
AATGGACTACCTTGAATCCCGCGGCGTACGACGAGCGCTCTGCACACGGAACTTCGAGTACGTTGTAGTTATCAA
CGCAACCTTCCACATGCATTCTAGATACGTACTGTAATGTGCACACAACGCTAACCTATATTCGCATCTTTAGAG
CACCAGTCCAGAACCTGATTGACAATCATCTCAACGGTCATGTCTTCCTACCAATCATCACGCGGGACACGCCAA
ATCTCCTGCCCAAGCCTGATCCCGCCGGCATTCTGCATATTGCGAGTGAATGGGGTCTTGATGATGGTCGGAATT
TGATCATGGTTGGTGATAGCATTGATGATATGACGGCTGGGCATATGGCTGGCGCTGCGACGGTGTTGCTTTTGA
ATGAGCATAATGTGCATTTGAAGGAACATCCGCATACGGATCTTTGCATTAAGCAGCTATCTGATTTGATCGATG
TTCTGGAGGCAGGATTTGTCGGGACTAGAGAGAACGATGAGCATGGCGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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