Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7565.t1
Gene name
Locationscaffold_24:180611..181573
Strand+
Gene length (bp)962
Transcript length (bp)789
Coding sequence length (bp)789
Protein length (aa) 263

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 3.7E-45 18 255
PF00106 adh_short short chain dehydrogenase 5.0E-42 12 207
PF08659 KR KR domain 2.6E-05 13 118

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7565.t1
MDSASLFNVKGKVVLVTGGAKGIGRMISEGYVTNGATVYISSRDAKACEQAAKELNALGKGKAYAIPANFYKLEE
VKRLAEELGKRESKLHILVNNSGSNWGAPYDEYPSEAFTRVLTLNLHRVFDLTQLVTPLLEKAATPEDPSRIINI
GSIDGLRVPSLETFAYTSSKAGLHHLSRVLANHLGRRNITSNTLACGPFESKMMAATLKTFGDSIKASVPLGRIG
TPQDVAGACLFLSSRAGAFVNGATITLDGGSAVSARL*
Coding >Pro_DTO377G3_2|g7565.t1
ATGGATTCCGCAAGTCTTTTCAACGTCAAGGGCAAAGTGGTGCTGGTCACCGGAGGAGCCAAAGGCATCGGTCGC
ATGATCTCAGAGGGCTATGTAACAAACGGTGCCACCGTCTACATCTCGTCGCGTGATGCCAAGGCATGTGAGCAA
GCAGCCAAGGAGCTCAATGCCCTGGGCAAGGGCAAAGCCTACGCGATTCCGGCCAATTTCTATAAACTCGAGGAA
GTGAAGAGGCTGGCCGAGGAGCTAGGCAAGCGCGAAAGCAAGCTACACATTCTCGTGAACAACTCCGGCTCGAAC
TGGGGCGCCCCCTACGACGAATACCCATCCGAGGCCTTCACGCGAGTCCTCACCCTCAACCTCCACCGCGTCTTC
GATCTGACCCAGCTCGTCACACCCCTCCTGGAGAAAGCGGCTACACCGGAGGATCCTTCTCGCATTATCAATATC
GGTAGCATCGATGGACTCCGTGTTCCCTCGCTCGAGACATTCGCATACACTTCCAGCAAGGCCGGTCTGCACCAC
TTGAGCCGGGTGCTTGCCAACCACCTGGGCAGGCGAAATATCACCTCTAATACCTTGGCCTGTGGTCCTTTTGAA
AGTAAGATGATGGCTGCTACCTTGAAGACATTCGGTGACTCTATCAAGGCTAGCGTGCCTCTGGGTCGGATTGGA
ACCCCACAGGACGTGGCCGGGGCTTGCTTGTTCTTGAGTAGCCGTGCCGGTGCGTTTGTGAACGGCGCGACTATC
ACACTCGACGGTGGGAGTGCCGTCTCTGCCAGGTTGTAA
Transcript >Pro_DTO377G3_2|g7565.t1
ATGGATTCCGCAAGTCTTTTCAACGTCAAGGGCAAAGTGGTGCTGGTCACCGGAGGAGCCAAAGGCATCGGTCGC
ATGATCTCAGAGGGCTATGTAACAAACGGTGCCACCGTCTACATCTCGTCGCGTGATGCCAAGGCATGTGAGCAA
GCAGCCAAGGAGCTCAATGCCCTGGGCAAGGGCAAAGCCTACGCGATTCCGGCCAATTTCTATAAACTCGAGGAA
GTGAAGAGGCTGGCCGAGGAGCTAGGCAAGCGCGAAAGCAAGCTACACATTCTCGTGAACAACTCCGGCTCGAAC
TGGGGCGCCCCCTACGACGAATACCCATCCGAGGCCTTCACGCGAGTCCTCACCCTCAACCTCCACCGCGTCTTC
GATCTGACCCAGCTCGTCACACCCCTCCTGGAGAAAGCGGCTACACCGGAGGATCCTTCTCGCATTATCAATATC
GGTAGCATCGATGGACTCCGTGTTCCCTCGCTCGAGACATTCGCATACACTTCCAGCAAGGCCGGTCTGCACCAC
TTGAGCCGGGTGCTTGCCAACCACCTGGGCAGGCGAAATATCACCTCTAATACCTTGGCCTGTGGTCCTTTTGAA
AGTAAGATGATGGCTGCTACCTTGAAGACATTCGGTGACTCTATCAAGGCTAGCGTGCCTCTGGGTCGGATTGGA
ACCCCACAGGACGTGGCCGGGGCTTGCTTGTTCTTGAGTAGCCGTGCCGGTGCGTTTGTGAACGGCGCGACTATC
ACACTCGACGGTGGGAGTGCCGTCTCTGCCAGGTTGTAA
Gene >Pro_DTO377G3_2|g7565.t1
ATGGATTCCGCAAGTCTTTTCAACGTCAAGGTCAGATCACACGTATTCTACCTCTCCGACCATTCTAACGCGCTC
ACAGGGCAAAGTGGTGCTGGTCACCGGAGGAGCCAAAGGCATCGGTCGCATGATCTCAGAGGGCTATGTAACAAA
CGGTGCCACCGTCTACATCTCGTCGCGTGATGCCAAGGCATGTGAGCAAGCAGCCAAGGAGCTCAATGCCCTGGG
CAAGGGCAAAGCCTACGCGATTCCGGCCAATTTCTATAAACTCGAGGAAGTGAAGAGGCTGGCCGAGGAGCTAGG
CAAGCGCGAAAGCAGTAAGACACCACATCCAATGGAGAATCATATCATTTCTGACAAGATGTCTCTTTCCTAGAG
CTACACATTCTCGTGAACAACTCCGGCTCGAACTGGGGCGCCCCCTACGACGAATACCCATCCGAGGCCTTCACG
CGAGTCCTCACCCTCAACCTCCACCGCGTCTTCGATCTGACCCAGCTCGTCACACCCCTCCTGGAGAAAGCGGCT
ACACCGGAGGATCCTTCTCGCATTATCAATATCGGTAGCATCGATGGACTCCGTGTTCCCTCGCTCGAGACATTC
GCATACACTTCCAGCAAGGCCGGTCTGCACCACTTGAGCCGGGTGCTTGCCAACCACCTGGGCAGGCGAAATATC
ACGTAAGTATACATTATATGCTTCACCTCTCTTCGTTTGATGTATCGAGAACTGATTCAATTTGCAGCTCTAATA
CCTTGGCCTGTGGTCCTTTTGAAAGTAAGATGATGGCTGCTACCTTGAAGACATTCGGTGACTCTATCAAGGCTA
GCGTGCCTCTGGGTCGGATTGGAACCCCACAGGACGTGGCCGGGGCTTGCTTGTTCTTGAGTAGCCGTGCCGGTG
CGTTTGTGAACGGCGCGACTATCACACTCGACGGTGGGAGTGCCGTCTCTGCCAGGTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail