Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7556.t1
Gene name
Locationscaffold_24:147652..148633
Strand+
Gene length (bp)981
Transcript length (bp)867
Coding sequence length (bp)867
Protein length (aa) 289

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01822 WSC WSC domain 1.0E-11 38 112

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 202 224 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7556.t1
MLFNTHGALVVSGVVMAAAAAVPEDFKVVRRAPLGTLQGCYSSIPGYGKSTGWTYQSSGWCLDHCAKDYATFALT
GGSDCVCGNTMPPDSAKVSSDKCNKSCSGWPDDMCGGTGYYSVYTTNLEDDVPTYSESGSTTTTSSTSSSSTSSK
TTTQTDGSTTAPTTSSSISEVTETATSEPTTSGLSEEDINEQSSKGKNTAAIAAGVVIGVVGFAALCGAVFFWWR
SKKNRVGAVGGVPGGYGRDSGPPSMSDSRFDGDYMAQRRQSNGSIDDDHDFSRRILQVTNPDR*
Coding >Pro_DTO377G3_2|g7556.t1
ATGCTTTTCAACACTCATGGCGCCCTCGTGGTGTCCGGTGTGGTGATGGCAGCCGCCGCGGCAGTTCCAGAAGAC
TTCAAGGTGGTCCGTCGTGCGCCGTTAGGGACACTTCAAGGTTGTTACTCTAGCATTCCTGGATATGGAAAGTCA
ACAGGCTGGACATACCAAAGTTCCGGGTGGTGTCTGGACCACTGCGCCAAAGACTACGCGACATTCGCTTTGACA
GGAGGCTCAGACTGTGTGTGTGGTAATACGATGCCCCCAGACAGTGCCAAAGTTTCAAGCGACAAATGCAACAAA
TCCTGCAGTGGCTGGCCTGATGATATGTGCGGTGGTACCGGCTACTACTCTGTCTATACCACCAATTTGGAAGAC
GACGTTCCCACGTACTCTGAATCCGGGTCCACGACCACCACATCAAGCACGAGCTCGAGCAGTACCAGCAGCAAA
ACGACGACGCAAACCGATGGGTCTACAACTGCTCCCACTACTAGTAGTAGTATTAGTGAAGTTACCGAAACCGCC
ACATCTGAGCCTACCACGAGCGGTCTCTCTGAAGAGGATATCAATGAACAGTCCTCCAAGGGCAAGAATACTGCC
GCGATTGCGGCCGGAGTCGTAATCGGAGTGGTCGGATTCGCTGCTCTCTGTGGTGCTGTCTTCTTCTGGTGGCGA
TCCAAGAAGAACAGGGTCGGTGCTGTGGGTGGGGTTCCTGGCGGCTATGGCCGTGACTCTGGCCCGCCCTCGATG
TCCGATTCTCGCTTCGATGGCGACTACATGGCTCAGCGCCGCCAAAGCAATGGCAGCATCGATGATGACCATGAC
TTCTCTCGTCGGATCTTGCAGGTGACAAACCCTGATCGTTAA
Transcript >Pro_DTO377G3_2|g7556.t1
ATGCTTTTCAACACTCATGGCGCCCTCGTGGTGTCCGGTGTGGTGATGGCAGCCGCCGCGGCAGTTCCAGAAGAC
TTCAAGGTGGTCCGTCGTGCGCCGTTAGGGACACTTCAAGGTTGTTACTCTAGCATTCCTGGATATGGAAAGTCA
ACAGGCTGGACATACCAAAGTTCCGGGTGGTGTCTGGACCACTGCGCCAAAGACTACGCGACATTCGCTTTGACA
GGAGGCTCAGACTGTGTGTGTGGTAATACGATGCCCCCAGACAGTGCCAAAGTTTCAAGCGACAAATGCAACAAA
TCCTGCAGTGGCTGGCCTGATGATATGTGCGGTGGTACCGGCTACTACTCTGTCTATACCACCAATTTGGAAGAC
GACGTTCCCACGTACTCTGAATCCGGGTCCACGACCACCACATCAAGCACGAGCTCGAGCAGTACCAGCAGCAAA
ACGACGACGCAAACCGATGGGTCTACAACTGCTCCCACTACTAGTAGTAGTATTAGTGAAGTTACCGAAACCGCC
ACATCTGAGCCTACCACGAGCGGTCTCTCTGAAGAGGATATCAATGAACAGTCCTCCAAGGGCAAGAATACTGCC
GCGATTGCGGCCGGAGTCGTAATCGGAGTGGTCGGATTCGCTGCTCTCTGTGGTGCTGTCTTCTTCTGGTGGCGA
TCCAAGAAGAACAGGGTCGGTGCTGTGGGTGGGGTTCCTGGCGGCTATGGCCGTGACTCTGGCCCGCCCTCGATG
TCCGATTCTCGCTTCGATGGCGACTACATGGCTCAGCGCCGCCAAAGCAATGGCAGCATCGATGATGACCATGAC
TTCTCTCGTCGGATCTTGCAGGTGACAAACCCTGATCGTTAA
Gene >Pro_DTO377G3_2|g7556.t1
ATGCTTTTCAACACTCATGGCGCCCTCGTGGTGTCCGGTGTGGTGATGGCAGCCGCCGCGGCAGTTCCAGAAGAC
TTCAAGGTGGTCCGTCGTGCGCCGTTAGGGACACTTCAAGGTTGTTACTCTAGCATTCCTGGATATGGAAAGTCA
ACAGGCTGGACATACCAAAGTTCCGGGTGGTGTCTGGACCACTGCGCCAAAGACTACGCGACATTCGCTTTGACA
GGAGGCTCAGACTGTGTGTGTGGTAATACGATGCCCCCAGACAGTGCCAAAGTTTCAAGCGACAAATGCAACAAA
TCCTGCAGTGGCTGGCCTGATGATATGTGTATGTCTATGCCCCTCCTTCATCGGTCTCAAAGAATTGACTTGCTA
ACGAAATTCTATAGGCGGTGGTACCGGCTACTACTCTGTCTATACCACCAATTTGGAAGACGACGTTCCCACGTA
CTCTGAATCCGGGTCCACGACCACCACATCAAGCACGAGCTCGAGCAGTACCAGCAGCAAAACGACGACGCAAAC
CGATGGGTCTACAACTGCTCCCACTACTAGTAGTAGTATTAGTGAAGTTACCGAAACCGCCACATCTGAGCCTAC
CACGAGCGGTCTCTCTGAAGAGGATATCAATGAACAGTCCTCCAAGGGCAAGAATACTGCCGCGATTGCGGCCGG
AGTCGTAATCGGAGTGGTCGGATTCGCTGCTCTCTGTGGTGCTGTCTTCTTCTGGTGGCGATCCAAGAAGAACAG
GGTCGGTGCTGTGGGTGGGGTTCCTGGCGGCTATGGCCGTGACTCTGGCCCGCCCTCGATGTCCGATTCTCGCTT
CGATGGCGACTACATGGCTCAGCGCCGCCAAAGCAATGGCAGCATCGATGATGACCATGACTTCTCTCGTCGGAT
CTTGCAGGTACACACGTACAACGCCTAAAAGCATTGTTTCGAAGCTGACTTGTGTCACAGGTGACAAACCCTGAT
CGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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