Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7509.t1
Gene name
Locationscaffold_24:7140..7938
Strand-
Gene length (bp)798
Transcript length (bp)798
Coding sequence length (bp)798
Protein length (aa) 266

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20493 WD-like_fungi Fungal WD-like 1.4E-05 58 263

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7509.t1
MRSLYLLATLLLNQRAAIALSLSTTELVEQLFLDFTIDEVVQNDTRGFPIVEPWASEYVNATQEGRFGDAVWARY
HISGDVDSSTGIIEGTNLTVLQSIEEDALGYRSSEPELYANALLFYGNTSKTDSHTDIIDLFTTIAQQTPEEAQE
SLNKRVTYGIKCSTGNLAYKSSCLSLLQNMSQSRSNIGNIRRIYTYSSCNLRVGPYHGSYTDLSYYTAHSVARLI
EDQCTYCPACTNNLRVSGYSPKNSGHRKVCLSSKRTGCSP*
Coding >Pro_DTO377G3_2|g7509.t1
ATGCGTTCGCTTTACCTCCTCGCAACTCTGCTTCTAAACCAACGGGCCGCTATTGCTCTGAGTCTGAGCACCACC
GAGCTTGTCGAACAGCTGTTTCTAGACTTCACCATCGACGAGGTGGTTCAAAATGACACAAGAGGGTTCCCTATC
GTCGAGCCTTGGGCAAGCGAATACGTGAACGCCACACAGGAGGGACGATTCGGCGACGCAGTGTGGGCCAGATAC
CACATTTCCGGGGATGTGGACAGCAGCACCGGCATCATCGAGGGCACAAACTTGACCGTTCTTCAGAGTATCGAG
GAAGACGCATTGGGCTACAGAAGCTCCGAGCCAGAGCTATATGCCAATGCCCTCTTATTCTACGGCAACACAAGC
AAGACAGATTCGCACACCGACATCATTGACCTCTTCACGACTATCGCCCAGCAAACTCCCGAAGAAGCCCAGGAG
AGCCTCAACAAGCGTGTTACATACGGCATTAAATGCAGTACGGGTAACCTTGCGTACAAGTCTAGCTGCCTTTCC
CTTCTCCAGAATATGTCCCAGTCGCGGTCGAACATTGGCAACATAAGGAGAATTTACACTTACAGTTCGTGCAAT
CTCAGGGTTGGTCCTTATCACGGTTCTTATACCGATCTGAGCTATTACACTGCCCATTCCGTTGCACGATTGATT
GAGGACCAGTGCACGTACTGTCCTGCGTGCACTAACAATTTGAGGGTCTCGGGATACTCGCCCAAGAACTCTGGA
CATCGTAAGGTGTGTCTGAGCAGCAAAAGGACGGGGTGCTCGCCCTAG
Transcript >Pro_DTO377G3_2|g7509.t1
ATGCGTTCGCTTTACCTCCTCGCAACTCTGCTTCTAAACCAACGGGCCGCTATTGCTCTGAGTCTGAGCACCACC
GAGCTTGTCGAACAGCTGTTTCTAGACTTCACCATCGACGAGGTGGTTCAAAATGACACAAGAGGGTTCCCTATC
GTCGAGCCTTGGGCAAGCGAATACGTGAACGCCACACAGGAGGGACGATTCGGCGACGCAGTGTGGGCCAGATAC
CACATTTCCGGGGATGTGGACAGCAGCACCGGCATCATCGAGGGCACAAACTTGACCGTTCTTCAGAGTATCGAG
GAAGACGCATTGGGCTACAGAAGCTCCGAGCCAGAGCTATATGCCAATGCCCTCTTATTCTACGGCAACACAAGC
AAGACAGATTCGCACACCGACATCATTGACCTCTTCACGACTATCGCCCAGCAAACTCCCGAAGAAGCCCAGGAG
AGCCTCAACAAGCGTGTTACATACGGCATTAAATGCAGTACGGGTAACCTTGCGTACAAGTCTAGCTGCCTTTCC
CTTCTCCAGAATATGTCCCAGTCGCGGTCGAACATTGGCAACATAAGGAGAATTTACACTTACAGTTCGTGCAAT
CTCAGGGTTGGTCCTTATCACGGTTCTTATACCGATCTGAGCTATTACACTGCCCATTCCGTTGCACGATTGATT
GAGGACCAGTGCACGTACTGTCCTGCGTGCACTAACAATTTGAGGGTCTCGGGATACTCGCCCAAGAACTCTGGA
CATCGTAAGGTGTGTCTGAGCAGCAAAAGGACGGGGTGCTCGCCCTAG
Gene >Pro_DTO377G3_2|g7509.t1
ATGCGTTCGCTTTACCTCCTCGCAACTCTGCTTCTAAACCAACGGGCCGCTATTGCTCTGAGTCTGAGCACCACC
GAGCTTGTCGAACAGCTGTTTCTAGACTTCACCATCGACGAGGTGGTTCAAAATGACACAAGAGGGTTCCCTATC
GTCGAGCCTTGGGCAAGCGAATACGTGAACGCCACACAGGAGGGACGATTCGGCGACGCAGTGTGGGCCAGATAC
CACATTTCCGGGGATGTGGACAGCAGCACCGGCATCATCGAGGGCACAAACTTGACCGTTCTTCAGAGTATCGAG
GAAGACGCATTGGGCTACAGAAGCTCCGAGCCAGAGCTATATGCCAATGCCCTCTTATTCTACGGCAACACAAGC
AAGACAGATTCGCACACCGACATCATTGACCTCTTCACGACTATCGCCCAGCAAACTCCCGAAGAAGCCCAGGAG
AGCCTCAACAAGCGTGTTACATACGGCATTAAATGCAGTACGGGTAACCTTGCGTACAAGTCTAGCTGCCTTTCC
CTTCTCCAGAATATGTCCCAGTCGCGGTCGAACATTGGCAACATAAGGAGAATTTACACTTACAGTTCGTGCAAT
CTCAGGGTTGGTCCTTATCACGGTTCTTATACCGATCTGAGCTATTACACTGCCCATTCCGTTGCACGATTGATT
GAGGACCAGTGCACGTACTGTCCTGCGTGCACTAACAATTTGAGGGTCTCGGGATACTCGCCCAAGAACTCTGGA
CATCGTAAGGTGTGTCTGAGCAGCAAAAGGACGGGGTGCTCGCCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail