Protein ID | Pro_DTO377G3_2|g749.t1 |
Gene name | |
Location | scaffold_01:1924579..1927823 |
Strand | + |
Gene length (bp) | 3244 |
Transcript length (bp) | 2091 |
Coding sequence length (bp) | 2091 |
Protein length (aa) | 697 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01026 | TatD_DNase | TatD related DNase | 4.8E-43 | 15 | 302 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016788 | hydrolase activity, acting on ester bonds | Yes |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
GO:0016787 | hydrolase activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 586.76 | 304.11 | 869.42 |
5d_25C | Five days - 25 degrees Celsius | 310.03 | 157.01 | 463.05 |
7d_25C | Seven days - 25 degrees Celsius | 253.55 | 126.54 | 380.55 |
10d_25C | Ten days - 25 degrees Celsius | 182.38 | 91.07 | 273.69 |
7d_15C | Seven days - 15 degrees Celsius | 241.31 | 86.04 | 396.58 |
7d_30C | Seven days - 30 degrees Celsius | 389.46 | 171.34 | 607.60 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.008469 | yes |
3d_25C | 7d_25C | 0.000700 | yes |
3d_25C | 7d_15C | 0.004045 | yes |
3d_25C | 7d_30C | 0.163055 | no |
3d_25C | 10d_25C | 0.000700 | yes |
5d_25C | 7d_25C | 0.526359 | no |
5d_25C | 7d_15C | 0.492574 | no |
5d_25C | 7d_30C | 0.503826 | no |
5d_25C | 10d_25C | 0.047513 | yes |
7d_25C | 7d_15C | 0.914303 | no |
7d_25C | 7d_30C | 0.150448 | no |
7d_25C | 10d_25C | 0.266251 | no |
7d_15C | 7d_30C | 0.163564 | no |
7d_15C | 10d_25C | 0.439458 | no |
7d_30C | 10d_25C | 0.004840 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g749.t1 MKFFDVAVTFTADQFQGIYRGKQYHEPDFAEVLKRAREHGCERTMLTTMTLEGAKQNLQAVREFPAMCKMTLGVH PYHAAEIYGQPESQYLNELRELGETLLAESPSPLAAFGEIGLDYEYLDRADKETQQRAFRDQLELAVQFQLPLFL HVRESAKDFISIIKPFLPRLSRGGLVHSFAGTKGEMLQLVELGLDISVNGISFRTDEQLEMVRNIPLNKLQLETD APWCEVLSNDPKIAGYLETAKPLPASRKHNKFVLGQMVKTRNESCTIERVGLVVAGLKGVAMEEVAEAAWNNSSR MFWFVYRSQYTNFAKTLNTSITMKGTLILSGLLATTVSAHMQLNKPYPIRSPLNKDAKGEKDYSYTNPLSTSGSD YPCKGYANDAFEAVDTWQPGSTQEMSLEGSATHDGGSCQLSLTYDKGKTFKVIESIEGDCPIAKKYQFDVPSDAP TGDALFAWTWFNKVGNREMYMNCAMITIGGSSNHTVVDSEGRVAKETPKQALSQKTHTHTTNAKSSFDSLPDLFI ANANQAGKCVTVEGQAVHFPKPGPKLIGKADGPGYKCADHAPFLDDSSDSATKSSNTSTSTSATSTTSTTPKSEK KPAVISTSSFTTKAISKIAQALATPSVAADSRVQSAEDSSNNQFVDHVGQWSCHSGEILCSPDGLTFAMCTNGKP IFMGSVAAGTICRWGAITARQ* |
Coding | >Pro_DTO377G3_2|g749.t1 ATGAAATTCTTCGATGTCGCCGTCACATTCACGGCAGACCAATTCCAAGGCATCTACCGAGGAAAGCAATATCAC GAACCAGATTTTGCAGAAGTCCTGAAAAGAGCCCGAGAACATGGATGTGAAAGGACCATGCTCACCACCATGACT CTAGAGGGCGCAAAACAAAATTTGCAGGCAGTGAGGGAGTTCCCCGCGATGTGCAAAATGACCTTAGGCGTGCAT CCGTACCATGCCGCCGAGATCTATGGACAGCCAGAGTCCCAATATCTGAATGAGCTGCGCGAACTAGGTGAAACG CTCCTAGCTGAGAGTCCCTCGCCTTTGGCTGCGTTTGGGGAAATCGGGTTGGACTATGAGTACCTGGATCGGGCC GATAAGGAAACGCAGCAACGCGCATTCCGCGACCAATTAGAGCTGGCCGTGCAATTCCAGTTACCGTTGTTCTTG CATGTTCGTGAGTCAGCCAAAGATTTTATTTCCATCATCAAGCCTTTTCTGCCAAGACTGTCGCGTGGTGGATTG GTGCATTCTTTTGCAGGGACGAAGGGGGAGATGCTCCAGCTCGTGGAACTGGGTCTTGACATTAGTGTCAACGGT ATCTCATTCCGGACAGATGAACAGTTGGAAATGGTCAGAAATATTCCATTGAACAAGTTGCAACTGGAGACTGAT GCGCCATGGTGCGAGGTCTTGTCTAATGACCCCAAAATCGCGGGTTATCTGGAAACTGCGAAGCCGTTGCCGGCG AGTCGGAAACATAACAAGTTTGTACTAGGCCAGATGGTCAAGACACGGAATGAAAGTTGTACTATAGAGCGTGTC GGGTTGGTTGTAGCCGGTTTGAAGGGTGTCGCTATGGAAGAAGTGGCTGAGGCCGCTTGGAACAATAGCAGTCGG ATGTTTTGGTTTGTTTATCGAAGTCAATATACAAACTTTGCAAAGACGTTAAACACATCAATCACAATGAAGGGC ACATTGATCCTCTCTGGTCTTCTGGCCACCACTGTCTCGGCTCACATGCAGTTGAACAAGCCTTACCCTATCCGC AGTCCCTTAAACAAGGATGCCAAGGGCGAGAAGGATTATTCTTACACCAACCCTCTCTCCACCTCGGGTAGCGAT TACCCATGCAAAGGATATGCCAATGATGCCTTTGAGGCTGTGGATACATGGCAACCAGGCTCCACCCAAGAGATG TCGTTGGAAGGCAGTGCCACCCATGACGGCGGCTCATGCCAGCTCTCCCTGACTTATGACAAGGGTAAGACATTC AAGGTCATTGAGTCGATCGAGGGTGACTGCCCTATTGCTAAGAAGTACCAATTTGATGTCCCCTCGGACGCACCC ACCGGTGATGCTCTGTTCGCTTGGACCTGGTTCAACAAGGTCGGCAACCGCGAGATGTACATGAACTGTGCCATG ATCACAATTGGTGGTTCCAGCAACCACACCGTTGTCGACTCCGAGGGCCGTGTGGCTAAGGAGACCCCAAAGCAG GCGCTCAGCCAGAAGACCCATACCCACACTACGAACGCGAAGAGCAGCTTCGATAGTCTCCCTGATCTCTTCATT GCCAACGCCAACCAGGCTGGCAAGTGTGTGACCGTCGAGGGCCAGGCTGTTCACTTCCCCAAGCCCGGTCCCAAA CTGATCGGCAAGGCCGATGGCCCTGGCTACAAGTGCGCCGACCATGCTCCCTTCCTGGACGACAGCTCTGATTCC GCGACGAAGTCATCCAATACCAGCACCTCTACCTCCGCCACCTCCACTACTTCCACCACCCCCAAGTCCGAGAAA AAGCCTGCTGTCATCAGCACCTCCTCATTCACCACGAAGGCGATTTCCAAGATCGCCCAGGCCCTCGCCACTCCT TCTGTCGCAGCTGACTCCCGTGTGCAATCTGCCGAGGACTCATCCAACAACCAGTTTGTCGACCATGTCGGTCAA TGGTCTTGCCACTCTGGGGAAATTCTTTGCTCCCCAGATGGGTTGACCTTTGCCATGTGCACTAACGGCAAGCCC ATCTTCATGGGATCCGTCGCTGCTGGTACTATTTGCCGTTGGGGAGCTATCACTGCTCGCCAGTAA |
Transcript | >Pro_DTO377G3_2|g749.t1 ATGAAATTCTTCGATGTCGCCGTCACATTCACGGCAGACCAATTCCAAGGCATCTACCGAGGAAAGCAATATCAC GAACCAGATTTTGCAGAAGTCCTGAAAAGAGCCCGAGAACATGGATGTGAAAGGACCATGCTCACCACCATGACT CTAGAGGGCGCAAAACAAAATTTGCAGGCAGTGAGGGAGTTCCCCGCGATGTGCAAAATGACCTTAGGCGTGCAT CCGTACCATGCCGCCGAGATCTATGGACAGCCAGAGTCCCAATATCTGAATGAGCTGCGCGAACTAGGTGAAACG CTCCTAGCTGAGAGTCCCTCGCCTTTGGCTGCGTTTGGGGAAATCGGGTTGGACTATGAGTACCTGGATCGGGCC GATAAGGAAACGCAGCAACGCGCATTCCGCGACCAATTAGAGCTGGCCGTGCAATTCCAGTTACCGTTGTTCTTG CATGTTCGTGAGTCAGCCAAAGATTTTATTTCCATCATCAAGCCTTTTCTGCCAAGACTGTCGCGTGGTGGATTG GTGCATTCTTTTGCAGGGACGAAGGGGGAGATGCTCCAGCTCGTGGAACTGGGTCTTGACATTAGTGTCAACGGT ATCTCATTCCGGACAGATGAACAGTTGGAAATGGTCAGAAATATTCCATTGAACAAGTTGCAACTGGAGACTGAT GCGCCATGGTGCGAGGTCTTGTCTAATGACCCCAAAATCGCGGGTTATCTGGAAACTGCGAAGCCGTTGCCGGCG AGTCGGAAACATAACAAGTTTGTACTAGGCCAGATGGTCAAGACACGGAATGAAAGTTGTACTATAGAGCGTGTC GGGTTGGTTGTAGCCGGTTTGAAGGGTGTCGCTATGGAAGAAGTGGCTGAGGCCGCTTGGAACAATAGCAGTCGG ATGTTTTGGTTTGTTTATCGAAGTCAATATACAAACTTTGCAAAGACGTTAAACACATCAATCACAATGAAGGGC ACATTGATCCTCTCTGGTCTTCTGGCCACCACTGTCTCGGCTCACATGCAGTTGAACAAGCCTTACCCTATCCGC AGTCCCTTAAACAAGGATGCCAAGGGCGAGAAGGATTATTCTTACACCAACCCTCTCTCCACCTCGGGTAGCGAT TACCCATGCAAAGGATATGCCAATGATGCCTTTGAGGCTGTGGATACATGGCAACCAGGCTCCACCCAAGAGATG TCGTTGGAAGGCAGTGCCACCCATGACGGCGGCTCATGCCAGCTCTCCCTGACTTATGACAAGGGTAAGACATTC AAGGTCATTGAGTCGATCGAGGGTGACTGCCCTATTGCTAAGAAGTACCAATTTGATGTCCCCTCGGACGCACCC ACCGGTGATGCTCTGTTCGCTTGGACCTGGTTCAACAAGGTCGGCAACCGCGAGATGTACATGAACTGTGCCATG ATCACAATTGGTGGTTCCAGCAACCACACCGTTGTCGACTCCGAGGGCCGTGTGGCTAAGGAGACCCCAAAGCAG GCGCTCAGCCAGAAGACCCATACCCACACTACGAACGCGAAGAGCAGCTTCGATAGTCTCCCTGATCTCTTCATT GCCAACGCCAACCAGGCTGGCAAGTGTGTGACCGTCGAGGGCCAGGCTGTTCACTTCCCCAAGCCCGGTCCCAAA CTGATCGGCAAGGCCGATGGCCCTGGCTACAAGTGCGCCGACCATGCTCCCTTCCTGGACGACAGCTCTGATTCC GCGACGAAGTCATCCAATACCAGCACCTCTACCTCCGCCACCTCCACTACTTCCACCACCCCCAAGTCCGAGAAA AAGCCTGCTGTCATCAGCACCTCCTCATTCACCACGAAGGCGATTTCCAAGATCGCCCAGGCCCTCGCCACTCCT TCTGTCGCAGCTGACTCCCGTGTGCAATCTGCCGAGGACTCATCCAACAACCAGTTTGTCGACCATGTCGGTCAA TGGTCTTGCCACTCTGGGGAAATTCTTTGCTCCCCAGATGGGTTGACCTTTGCCATGTGCACTAACGGCAAGCCC ATCTTCATGGGATCCGTCGCTGCTGGTACTATTTGCCGTTGGGGAGCTATCACTGCTCGCCAGTAA |
Gene | >Pro_DTO377G3_2|g749.t1 ATGAAATTCTTCGATGTAAGAGAATCTCTTTCATTTTTTCAAGCAGCCTGATTAACACTAGCACCAGGTCGCCGT CACATTCACGGCAGACCAATTCCAAGGCATCTACCGAGGAAAGCAATATCACGAACCAGATTTTGCAGAAGTCCT GAAAAGAGCCCGAGAACATGGATGTGAAAGGACCATGCTCACCACCATGACTCTAGAGGGCGCAAAACAAAATTT GCAGGCAGTGAGGGAGTTCCCCGCGATGTGCAAAATGACCTTAGGCGTGCATCCGTACCATGCCGCCGAGATCTA TGGACAGCCAGAGTCCCAATATCTGAATGAGCTGCGCGAACTAGGTGAAACGCTCCTAGCTGAGAGTCCCTCGCC TTTGGCTGCGTTTGGGGAAATCGGGTTGGACTATGAGTACCTGGATCGGGCCGATAAGGAAACGCAGCAACGCGC ATTCCGCGACCAATTAGAGCTGGCCGTGCAATTCCAGTTACCGTTGTTCTTGCATGTTCGTGAGTCAGCCAAAGA TTTTATTTCCATCATCAAGCCTTTTCTGCCAAGACTGTCGCGTGGTGGATTGGTGCATTCTTTTGCAGGGACGAA GGGGGAGATGCTCCAGCTCGTGGAACTGGGTCTTGACATTAGTGTCAACGGTATCTCATTCCGGACAGATGAACA GTTGGAAATGGTCAGAAATATTCCATTGAACAAGTTGCAACTGGAGACTGATGCGCCATGGTGCGAGGTCTTGTC TAATGACCCCAAAATCGCGGGTTATCTGGAAACTGCGAAGCCGTTGCCGGCGAGTCGGAAACATAACAAGTTTGT ACTAGGCCAGATGGTCAAGACACGGAATGAAAGTTGTACTATAGAGCGTGTCGGGTTGGTTGTAGCCGGTTTGAA GGGTGTCGCTATGGAAGAAGTGGCTGAGGCCGCTTGGAACAATAGCAGTCGGATGTTTTGGTTGTGAATATATAC CGTTGAGCAGGAAAATTAGAACAATGTACAGGACTTGAAGAATCTCTTTTTGATTTAGCTGGTTTAATTGGATCA TTAGAAGTATCGATACTTGAAGCTCATTTGTAGCATGCTTAACTAGCAGAGTAATGCAGACTAGTAGTAGTTATA CTACGTACCCCAAAATGCGCCGTGTAGATCTAGTAGCAACAAGCTTTTTTCTACGCCATGAACTCAAAAGCAATC TTGGTAGATCGACGTAGATGTAAACAAAGCCCTTGTATCAGCGAACTATGACTGGTGCCCTGAATAGACATGCAG GGGGGAACACAGGGGTTTCGATCGCCCCTTAGGGCCCGGGCATGAGGCCGAGCCCCAAACTGGTTCTATTTCACA GGCCACGATCGGCCGAAATGAAGTAGACAGAATGGAGATTTGTCAATCTCAATACTTGATTACTGGACAATTAAA TCTATAAATAATTGTGACGCGTCCTTTTTTGTCTTTTCGGGATCAAGATTCCTGAACAGAACTTGGCTCACGGAG ATTAATACAGGTTGGAATGAAGGAAGACGTGATGCCTTCTTTTTCACATTCGATCGCTCAGAGCCCACTATGTTG CCCCTCGAGTCGTTGCCACTATACAGCAGGGTTCGTTTATATGGCGATCTGAGTATCTGAACAACACGAAGTAGG GAAAAGATCTATATGACTTTCTAATGGGTGTATTGAGATCTTAAATAGACTCATTGATTGTGTTAAATTGTCAAT TATTTACCCTTAACCGCCTATGCGAAGTTAAGCACACATCATGATGGAGGGCCACGGTTTGTTGACATTCTTGAC GTTGCGAGGGCCATCGCTGAACCATCAGCGCATGGGTATCTGCCATTCCTCCACGGAGTTATGTGGAATGTTATT GACCACTGGCCATGTATTTATACTAATTGCTGTCGACCAGCTCGATCTTTATTCACACTTCTCAAGCCTCTACAC TCTTAAATTGACCCTGGTGGTTAAGTGTTTATCGAAGTCAATATACAAACTTTGCAAAGACGTTGTAAGTTAATC GCTGAGGACTGCTTCGTTCTTTCCTCAAAATTCATTCGATGCGGCCATTGTCACTTCCGAGACTAACAAGCGACT TAGAAACACATCAATCACAATGAAGGGCACATTGATCCTCTCTGGTCTTCTGGCCACCACTGTCTCGGCTCACAT GCAGTTGAACAAGCCTTACCCTATCCGCAGTCCCTTAAACAAGGATGCCAAGGGCGAGAAGGATTATTCTTACAC CAACCCTCTCTCCACCTCGGGTAGCGATTACCCATGCAAAGGATATGCCAATGATGCCTTTGAGGCTGTGGATAC ATGGCAACCAGGCTCCACCCAAGAGATGTCGTTGGAAGGCAGTGCCACCCATGACGGCGGCTCATGCCAGCTCTC CCTGACTTATGACAAGGGTAAGACATTCAAGGTCATTGAGTCGATCGAGGGTGACTGCCCTATTGCTAAGAAGTA CCAATTTGATGTCCCCTCGGACGCACCCACCGGTGATGCTCTGTTCGCTTGGACCTGGTTCAACAAGGTCGGCAA CCGCGAGATGTACATGAACTGTGCCATGATCACAATTGGTGGTTCCAGCAACCACACCGTTGTCGACTCCGAGGG CCGTGTGGCTAAGGAGACCCCAAAGCAGGCGCTCAGCCAGAAGACCCATACCCACACTACGAACGCGAAGAGCAG CTTCGATAGTCTCCCTGATCTCTTCATTGCCAACGCCAACCAGGCTGGCAAGTGTGTGACCGTCGAGGGCCAGGC TGTTCACTTCCCCAAGCCCGGTCCCAAACTGATCGGCAAGGCCGATGGCCCTGGCTACAAGTGCGCCGACCATGC TCCCTTCCTGGACGACAGCTCTGATTCCGCGACGAAGTCATCCAATACCAGCACCTCTACCTCCGCCACCTCCAC TACTTCCACCACCCCCAAGTCCGAGAAAAAGCCTGCTGTCATCAGCACCTCCTCATTCACCACGAAGGCGATTTC CAAGATCGCCCAGGCCCTCGCCACTCCTTCTGTCGCAGCTGACTCCCGTGTGCAATCTGCCGAGGACTCATCCAA CAACCAGTTTGTCGACCATGTCGGTCAATGGTCTTGCCACTCTGGGGAAATTCTTTGCTCCCCAGATGGGTTGAC CTTTGCCATGTGCACTAACGGCAAGCCCATCTTCATGGGATCCGTCGCTGCTGGTACTATTTGCCGTTGGGGAGC TATCACTGCTCGCCAGTAA |