Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g7489.t1
Gene name
Location	scaffold_23:313092..314161
Strand	+
Gene length (bp)	1069
Transcript length (bp)	837
Coding sequence length (bp)	837
Protein length (aa)	279

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01302	CAP_GLY	CAP-Gly domain	3.0E-26	179	257
PF14560	Ubiquitin_2	Ubiquitin-like domain	7.7E-14	27	99

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g7489.t1 MAFQPTPMDISVIITNAALAKPGNSEPRFLTERRITPTWTVMQVKTKLETMTGIPPGCQRLRVKVPGRPDQWADG DDRLIGDWGLVKGSEIEVNDNRPQTMRANFTDLSSVEKYVLPTETYEARSDSVLAWKKNQKLGRFDPNALSPEEA LRHQVEKDRTEIQTRGITVARRAIVLPSSPPHIRRGTIRFIGPVPTIPITGPGRELQQDAKLPADLQPIWVGIEL DEPMGKNDGSVGGQRYFECLGNRGVFVKPEKVEVGEFPPLGLDDDLDDLMEEI*
Coding	>Pro_DTO377G3_2\|g7489.t1 ATGGCATTCCAGCCTACCCCGATGGATATCTCCGTCATCATCACCAACGCGGCTTTAGCCAAACCTGGAAATTCG GAGCCTCGATTCCTGACTGAACGCCGCATCACCCCAACTTGGACGGTGATGCAGGTTAAGACAAAGTTAGAGACT ATGACGGGAATCCCACCAGGATGCCAGCGCCTGCGGGTGAAAGTTCCCGGTCGACCTGACCAATGGGCCGATGGG GACGACCGCCTGATTGGGGATTGGGGGTTGGTCAAGGGGTCGGAGATCGAGGTCAATGACAACCGCCCGCAAACC ATGCGGGCTAACTTTACCGACTTATCATCAGTCGAGAAATATGTGCTGCCAACTGAGACATACGAGGCCCGTTCG GACTCTGTGTTGGCTTGGAAGAAGAACCAGAAGCTGGGTCGGTTTGACCCTAACGCTCTATCGCCCGAAGAGGCT TTGCGACATCAAGTTGAGAAAGACCGGACCGAGATTCAAACGAGAGGAATCACTGTTGCTAGACGAGCTATCGTT CTGCCTTCATCTCCGCCGCATATTCGACGTGGCACGATCCGCTTCATTGGACCTGTTCCGACTATTCCTATTACC GGCCCGGGTCGCGAGCTGCAACAGGATGCAAAGCTTCCGGCAGATCTCCAGCCGATCTGGGTCGGGATTGAGCTT GACGAGCCGATGGGGAAGAATGACGGTAGTGTGGGCGGACAGCGCTACTTCGAGTGCTTAGGCAACAGGGGCGTC TTCGTGAAGCCCGAGAAGGTCGAGGTTGGAGAATTCCCCCCGCTGGGTCTAGATGACGACCTAGATGACCTAATG GAGGAAATTTAA
Transcript	>Pro_DTO377G3_2\|g7489.t1 ATGGCATTCCAGCCTACCCCGATGGATATCTCCGTCATCATCACCAACGCGGCTTTAGCCAAACCTGGAAATTCG GAGCCTCGATTCCTGACTGAACGCCGCATCACCCCAACTTGGACGGTGATGCAGGTTAAGACAAAGTTAGAGACT ATGACGGGAATCCCACCAGGATGCCAGCGCCTGCGGGTGAAAGTTCCCGGTCGACCTGACCAATGGGCCGATGGG GACGACCGCCTGATTGGGGATTGGGGGTTGGTCAAGGGGTCGGAGATCGAGGTCAATGACAACCGCCCGCAAACC ATGCGGGCTAACTTTACCGACTTATCATCAGTCGAGAAATATGTGCTGCCAACTGAGACATACGAGGCCCGTTCG GACTCTGTGTTGGCTTGGAAGAAGAACCAGAAGCTGGGTCGGTTTGACCCTAACGCTCTATCGCCCGAAGAGGCT TTGCGACATCAAGTTGAGAAAGACCGGACCGAGATTCAAACGAGAGGAATCACTGTTGCTAGACGAGCTATCGTT CTGCCTTCATCTCCGCCGCATATTCGACGTGGCACGATCCGCTTCATTGGACCTGTTCCGACTATTCCTATTACC GGCCCGGGTCGCGAGCTGCAACAGGATGCAAAGCTTCCGGCAGATCTCCAGCCGATCTGGGTCGGGATTGAGCTT GACGAGCCGATGGGGAAGAATGACGGTAGTGTGGGCGGACAGCGCTACTTCGAGTGCTTAGGCAACAGGGGCGTC TTCGTGAAGCCCGAGAAGGTCGAGGTTGGAGAATTCCCCCCGCTGGGTCTAGATGACGACCTAGATGACCTAATG GAGGAAATTTAA
Gene	>Pro_DTO377G3_2\|g7489.t1 ATGGCATTCCAGCCTACCCCGATGGATATCTCCGTCATCATCACCAACGCGGCTTTAGCCAAACCTGGAAATTCG GAGCCTCGATTCCTGACTGAACGCCGCATCACCCCAACTTGGACGGTGATGCAGGTTAAGACAAAGTTAGAGACT ATGACGGGAATCCCACCAGGATGCCAGCGCCTGCGGGTGAAAGTTCCCGGTCGACCTGACCAATGGGCCGATGGG GACGACCGCCTGATTGGGGATTGGGGGTTGGTCAAGGGGTCGGAGATCGAGGTGGGTTCTCTTTTCTTTCTATGT CTTGCTGTTCATTTGACCCTGTTCTGGCTGCTTTACCGGGCCCAAAACGGCATGTCGTTTGATCCGAGTTGTCAG GGCAATGGATATGCTACGAATTCTGGGCATATTCTAATTTATCCCCTCACTAGGTCAATGACAACCGCCCGCAAA CCATGCGGGCTAACTTTACCGACTTATCATCAGTCGAGAAATATGTGCTGCCAACTGAGACATACGAGGCCCGTT CGGACTCTGTGTTGGCTTGGAAGAAGAACCAGAAGCTGGGTCGGTTTGACCCTAACGCTCTATCGCCCGAAGAGG CTTTGCGACATCAAGTTGAGAAAGACCGGACCGAGATTCAAACGAGAGGTTCGTTGAAACAAAAAATTTCAAGTG TCAATGCAATTTATTTTTATTTTTCTTTCATTAATCTAATAATATATTGGCAGGAATCACTGTTGCTAGACGAGC TATCGTTCTGCCTTCATCTCCGCCGCATATTCGACGTGGCACGATCCGCTTCATTGGACCTGTTCCGACTATTCC TATTACCGGCCCGGGTCGCGAGCTGCAACAGGATGCAAAGCTTCCGGCAGATCTCCAGCCGATCTGGGTCGGGAT TGAGCTTGACGAGCCGATGGGGAAGAATGACGGTAGTGTGGGCGGACAGCGCTACTTCGAGTGCTTAGGCAACAG GGGCGTCTTCGTGAAGCCCGAGAAGGTCGAGGTTGGAGAATTCCCCCCGCTGGGTCTAGATGACGACCTAGATGA CCTAATGGAGGAAATTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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