Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7472.t1
Gene name
Locationscaffold_23:273550..275020
Strand+
Gene length (bp)1470
Transcript length (bp)1311
Coding sequence length (bp)1311
Protein length (aa) 437

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01053 Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme 8.2E-147 8 425
PF01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family 2.5E-11 59 185
PF00266 Aminotran_5 Aminotransferase class-V 2.6E-08 87 219
PF00155 Aminotran_1_2 Aminotransferase class I and II 4.0E-08 64 225
PF01212 Beta_elim_lyase Beta-eliminating lyase 9.2E-05 61 223

GO

GO Term Description Terminal node
GO:0030170 pyridoxal phosphate binding Yes
GO:0016829 lyase activity Yes
GO:0009058 biosynthetic process Yes
GO:0006520 cellular amino acid metabolic process Yes
GO:0008152 metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0019752 carboxylic acid metabolic process No
GO:0071704 organic substance metabolic process No
GO:0019842 vitamin binding No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0043168 anion binding No
GO:0009987 cellular process No
GO:0043436 oxoacid metabolic process No
GO:0006082 organic acid metabolic process No
GO:0070279 vitamin B6 binding No
GO:0044281 small molecule metabolic process No
GO:0008150 biological_process No
GO:0008144 drug binding No
GO:0003674 molecular_function No
GO:0006807 nitrogen compound metabolic process No
GO:0043167 ion binding No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0005488 binding No
GO:0044237 cellular metabolic process No
GO:0036094 small molecule binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7472.t1
MSENLHFDTLQLHAGHEPDSATNSRAVPIYATSSYVFNDSAHGARLFGLKEFGNIYSRIMNPTVDVFEKRLAALE
GGVAAVAASSGQAAQFMAISALAQAGDNIVSTSNLYGGTYNQFKVMLPRLGINTKFVQGDNPEDIAAAIDDRTKA
VYVESIGNPRYNVPDFEAIAKVAHEKGVPLVVDNTFGAGGYFVRPIDHGADIVVHSATKWIGGHGTTIAGVVIDS
GKFDWGKNATRFPQFVEPSEGYHGLKFWETFGSLAYAIRVRVEILRDLGSTLNPFGAQQLILGIETLSLRCERHA
TNALALAKWLRENENVSWVSYLGLEDHPSHELAKKYLPRGFGGVLSVGIKGGAAAGAQVVDNFKLISNLANVGDS
KTLAIHPWSTTHEQLTEQERRDSGVKEDGIRISVGTEYIDDIIADFEQSFQALKALPDRTA*
Coding >Pro_DTO377G3_2|g7472.t1
ATGTCCGAGAATCTCCACTTCGACACCCTGCAGCTTCATGCTGGTCACGAACCTGATTCAGCCACAAACTCACGC
GCTGTTCCAATCTATGCGACTAGCTCTTACGTGTTCAATGACTCGGCCCACGGCGCGAGGCTGTTCGGCCTCAAA
GAGTTCGGCAATATCTATAGCCGAATCATGAACCCAACAGTCGATGTCTTTGAGAAGCGACTTGCAGCTCTAGAA
GGTGGTGTTGCCGCCGTTGCTGCCTCCTCCGGCCAGGCAGCCCAATTCATGGCCATCTCGGCCCTCGCCCAAGCA
GGAGACAATATCGTCTCCACGAGTAACTTGTATGGCGGCACGTACAACCAGTTCAAGGTTATGCTCCCGCGCCTG
GGAATTAATACCAAGTTTGTTCAGGGTGACAATCCTGAGGATATTGCTGCGGCCATTGATGACCGCACCAAGGCT
GTCTACGTTGAGTCTATTGGTAACCCCCGCTACAATGTTCCGGACTTTGAGGCCATTGCGAAGGTCGCACACGAG
AAGGGTGTCCCGCTTGTGGTCGATAACACCTTCGGTGCAGGTGGCTACTTTGTTCGCCCAATTGACCACGGTGCC
GATATTGTCGTGCACAGTGCTACTAAGTGGATTGGTGGCCATGGTACCACCATTGCTGGAGTTGTGATTGACAGT
GGAAAGTTTGATTGGGGCAAGAACGCTACCCGGTTCCCCCAATTCGTCGAGCCATCCGAGGGTTACCACGGGTTG
AAGTTCTGGGAGACATTCGGCTCGCTTGCGTATGCTATCCGAGTGCGCGTTGAGATCCTGCGCGACCTCGGCTCC
ACCCTGAACCCCTTCGGTGCCCAGCAGTTGATACTCGGCATAGAGACTCTGAGTCTGCGATGCGAGCGACACGCA
ACCAACGCACTCGCCCTGGCTAAATGGTTGCGGGAGAACGAGAATGTCAGCTGGGTGTCATACCTCGGTCTGGAG
GACCACCCTAGTCACGAGCTCGCAAAGAAGTACCTGCCCCGCGGCTTTGGTGGTGTGCTGTCTGTGGGCATCAAG
GGTGGCGCTGCCGCTGGTGCTCAGGTCGTTGACAACTTCAAGTTGATCTCGAACCTTGCCAATGTCGGCGATTCT
AAGACCCTGGCCATCCACCCCTGGTCCACCACCCATGAGCAGCTCACGGAGCAGGAGCGTCGTGACTCCGGTGTC
AAGGAGGATGGAATCCGCATTTCGGTTGGCACAGAGTACATTGACGATATCATTGCCGACTTTGAGCAATCGTTC
CAGGCATTAAAGGCTCTGCCGGACCGTACTGCTTGA
Transcript >Pro_DTO377G3_2|g7472.t1
ATGTCCGAGAATCTCCACTTCGACACCCTGCAGCTTCATGCTGGTCACGAACCTGATTCAGCCACAAACTCACGC
GCTGTTCCAATCTATGCGACTAGCTCTTACGTGTTCAATGACTCGGCCCACGGCGCGAGGCTGTTCGGCCTCAAA
GAGTTCGGCAATATCTATAGCCGAATCATGAACCCAACAGTCGATGTCTTTGAGAAGCGACTTGCAGCTCTAGAA
GGTGGTGTTGCCGCCGTTGCTGCCTCCTCCGGCCAGGCAGCCCAATTCATGGCCATCTCGGCCCTCGCCCAAGCA
GGAGACAATATCGTCTCCACGAGTAACTTGTATGGCGGCACGTACAACCAGTTCAAGGTTATGCTCCCGCGCCTG
GGAATTAATACCAAGTTTGTTCAGGGTGACAATCCTGAGGATATTGCTGCGGCCATTGATGACCGCACCAAGGCT
GTCTACGTTGAGTCTATTGGTAACCCCCGCTACAATGTTCCGGACTTTGAGGCCATTGCGAAGGTCGCACACGAG
AAGGGTGTCCCGCTTGTGGTCGATAACACCTTCGGTGCAGGTGGCTACTTTGTTCGCCCAATTGACCACGGTGCC
GATATTGTCGTGCACAGTGCTACTAAGTGGATTGGTGGCCATGGTACCACCATTGCTGGAGTTGTGATTGACAGT
GGAAAGTTTGATTGGGGCAAGAACGCTACCCGGTTCCCCCAATTCGTCGAGCCATCCGAGGGTTACCACGGGTTG
AAGTTCTGGGAGACATTCGGCTCGCTTGCGTATGCTATCCGAGTGCGCGTTGAGATCCTGCGCGACCTCGGCTCC
ACCCTGAACCCCTTCGGTGCCCAGCAGTTGATACTCGGCATAGAGACTCTGAGTCTGCGATGCGAGCGACACGCA
ACCAACGCACTCGCCCTGGCTAAATGGTTGCGGGAGAACGAGAATGTCAGCTGGGTGTCATACCTCGGTCTGGAG
GACCACCCTAGTCACGAGCTCGCAAAGAAGTACCTGCCCCGCGGCTTTGGTGGTGTGCTGTCTGTGGGCATCAAG
GGTGGCGCTGCCGCTGGTGCTCAGGTCGTTGACAACTTCAAGTTGATCTCGAACCTTGCCAATGTCGGCGATTCT
AAGACCCTGGCCATCCACCCCTGGTCCACCACCCATGAGCAGCTCACGGAGCAGGAGCGTCGTGACTCCGGTGTC
AAGGAGGATGGAATCCGCATTTCGGTTGGCACAGAGTACATTGACGATATCATTGCCGACTTTGAGCAATCGTTC
CAGGCATTAAAGGCTCTGCCGGACCGTACTGCTTGA
Gene >Pro_DTO377G3_2|g7472.t1
ATGTCCGAGAATCTCCACTTCGACACCCTGCAGCTTCATGCTGGGTAAGTGTCCAATTTCACTTCAAAGACAAAT
CTAACCTAAAGCTCAAGTCACGAACCTGATTCAGCCACAAACTCACGCGCTGTTCCAATCTATGCGACTAGCTCT
TACGTGTTCAATGACTCGGCCCACGGCGCGAGGCTGTTCGGCCTCAAAGAGTTCGGCAATATCTATAGCCGAATC
ATGAACCCAACAGTCGATGTCTTTGAGAAGCGACTTGCAGCTCTAGAAGGTGGTGTTGCCGCCGTTGCTGCCTCC
TCCGGCCAGGCAGCCCAATTCATGGCCATCTCGGCCCTCGCCCAAGCAGGAGACAATATCGTCTCCACGAGTAAC
TTGTATGGCGGCACGTACAACCAGTTCAAGGTTATGCTCCCGCGCCTGGGAATTAATACCAAGTTTGTTCAGGGT
GACAATCCTGAGGATATTGCTGCGGCCATTGATGACCGCACCAAGGCTGTCTACGTTGAGTCTATTGGTAACCCC
CGCTACAATGTTCCGGACTTTGAGGCCATTGCGAAGGTCGCACACGAGAAGGGTGTCCCGCTTGTGGTATGTTGC
TTGTTTGAGAAGCGTGCGAGGATACAAAGCTTATGATTTTTACTTTAGGTCGATAACACCTTCGGTGCAGGTGGC
TACTTTGTTCGCCCAATTGACCACGGTGCCGATATTGTCGTGCACAGTGCTACTAAGTGGATTGGTGGCCATGGT
ACCACCATTGCTGGAGTTGTGATTGACAGTGGAAAGTTTGATTGGGGCAAGAACGCTACCCGGTTCCCCCAATTC
GTCGAGCCATCCGAGGGTTACCACGGGTTGAAGTTCTGGGAGACATTCGGCTCGCTTGCGTATGCTATCCGAGTG
CGCGTTGAGATCCTGCGCGACCTCGGCTCCACCCTGAACCCCTTCGGTGCCCAGCAGTTGATACTCGGCATAGAG
ACTCTGAGTCTGCGATGCGAGCGACACGCAACCAACGCACTCGCCCTGGCTAAATGGTTGCGGGAGAACGAGAAT
GTCAGCTGGGTGTCATACCTCGGTCTGGAGGACCACCCTAGTCACGAGCTCGCAAAGAAGTACCTGCCCCGCGGC
TTTGGTGGTGTGCTGTCTGTGGGCATCAAGGGTGGCGCTGCCGCTGGTGCTCAGGTCGTTGACAACTTCAAGTTG
ATCTCGAACCTTGCCAAGTATGGTTCATTCTTATTCGCTCTCCTTTGAATGCTTTTACTAACACATCGCAGTGTC
GGCGATTCTAAGACCCTGGCCATCCACCCCTGGTCCACCACCCATGAGCAGCTCACGGAGCAGGAGCGTCGTGAC
TCCGGTGTCAAGGAGGATGGAATCCGCATTTCGGTTGGCACAGAGTACATTGACGATATCATTGCCGACTTTGAG
CAATCGTTCCAGGCATTAAAGGCTCTGCCGGACCGTACTGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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