Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7469.t1
Gene name
Locationscaffold_23:264009..266163
Strand+
Gene length (bp)2154
Transcript length (bp)2052
Coding sequence length (bp)2052
Protein length (aa) 684

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00010 HLH Helix-loop-helix DNA-binding domain 1.5E-11 546 622

GO

GO Term Description Terminal node
GO:0046983 protein dimerization activity Yes
GO:0005488 binding No
GO:0005515 protein binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Helix-loop-helix

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7469.t1
MSWPEQLHENNLISAPGEEEFSNLFDFNIPFPEIEHGPGTGNMQHSHSLPTSTGPDSDMAHLRSHGMQYSGQMEG
LMDFNDNAQSHTNHGNSMPYSTPHMTPGFCAQQPSPMSQPPTHQHYMQGHNMIPPTPNSIEMHGNTARYPHRVDE
TDMYDGYSRMNEEQALYTPLISPAMTPLENQFRLPEYTIPGEYFTPLTSPALEAQNSESNSYQYHARQVSDMGFV
PTTTEVNPLPGSSAPPSPSIIRKPNTRQRPSTANRLNNTRKVKQSPIIRAQRKRSTLATNSEEFYNSLTQEMNST
KPQNQDIRSLQLSSNEGSGQDSVSPEPLSEPMMPPPALPPPRMSPAIAPHVQSSSPGTAATPALLMRIQRNQHSQ
DPAGQFRGQAQLAEPEFPDDIMEDISLPEAAAPSQLRPRPNRIDTAVRTPSIPTNGTPFLSPSAHDKPLSASLAP
SPRTTAMPSPSGPVPRKSDTRAASNRKRPSLSSTQASPQLRPKISPSIQPLMKGNEGMSQDALYLASKSNYQHIL
DGTLPSGVSYPEALAENLSSKRTNHKLAEQGRRNRINNALKEIELLIPQEFIDARSAKDAAESGGKANEKEKEKE
KANQAISKATAVEMAIDYIKALKMTLDATNAKLAAAEAKLSDKPYKESSTSASIVQSEKAPNDVANSETKNSEMK
SSETKSSP*
Coding >Pro_DTO377G3_2|g7469.t1
ATGTCGTGGCCAGAGCAGCTGCATGAGAATAATCTCATCAGTGCGCCTGGTGAGGAAGAATTTTCCAACCTGTTT
GATTTCAACATACCTTTCCCCGAAATCGAGCACGGACCAGGAACAGGGAATATGCAACATTCCCATTCCCTACCA
ACTTCCACCGGCCCAGACTCGGATATGGCTCACCTACGATCGCATGGCATGCAATACTCGGGCCAGATGGAGGGC
CTCATGGATTTCAACGATAACGCACAGTCGCACACGAACCACGGCAACTCAATGCCTTACTCGACTCCCCATATG
ACGCCAGGCTTTTGCGCGCAGCAACCATCGCCTATGTCGCAACCGCCTACCCACCAACATTATATGCAGGGCCAC
AACATGATCCCTCCCACCCCGAACAGTATCGAGATGCATGGCAATACCGCCCGATACCCCCATCGCGTGGACGAA
ACGGATATGTACGACGGATATTCACGCATGAACGAGGAACAGGCCCTTTACACTCCTCTTATCTCACCGGCTATG
ACGCCCCTGGAGAACCAATTCCGACTCCCCGAATACACAATCCCCGGCGAATACTTTACACCTCTCACCTCTCCC
GCCCTCGAGGCCCAAAACTCCGAATCCAACAGTTACCAGTACCACGCAAGACAGGTTTCGGACATGGGCTTCGTT
CCCACAACTACGGAAGTGAACCCTCTCCCTGGAAGCTCGGCTCCACCTTCTCCTAGCATTATTCGGAAACCCAAC
ACTCGTCAGCGGCCATCAACCGCTAATCGGCTCAATAACACACGGAAGGTCAAGCAATCACCCATTATTCGGGCG
CAGCGCAAACGCAGCACCTTGGCTACCAATTCGGAGGAGTTCTACAATAGCCTTACCCAGGAGATGAACTCGACA
AAGCCGCAAAATCAGGACATCCGCTCACTCCAGCTCAGCAGCAATGAAGGTTCCGGCCAGGACTCGGTATCCCCT
GAGCCATTGTCAGAACCGATGATGCCCCCTCCCGCTCTTCCTCCCCCTCGGATGTCTCCTGCAATTGCTCCCCAT
GTTCAAAGCTCTTCTCCCGGTACTGCCGCCACCCCTGCGCTTTTGATGCGCATTCAGCGGAATCAGCATTCGCAA
GACCCCGCAGGCCAATTCCGCGGCCAAGCGCAGCTTGCAGAGCCTGAGTTCCCAGATGATATAATGGAAGATATA
TCACTTCCAGAGGCGGCCGCTCCTTCGCAGCTGCGTCCGAGACCCAACCGCATCGACACCGCTGTACGGACTCCG
TCAATCCCCACGAATGGAACACCTTTCTTGAGTCCTTCGGCGCACGATAAGCCTCTCAGTGCCTCTCTTGCTCCC
AGTCCACGCACAACTGCAATGCCGTCTCCCAGTGGTCCGGTCCCTCGGAAATCAGATACCAGGGCTGCGTCTAAT
CGGAAACGACCTAGTTTGAGTTCCACTCAGGCCAGCCCACAGTTGCGGCCCAAGATTAGTCCCAGCATTCAGCCG
CTTATGAAAGGCAACGAGGGCATGTCACAAGATGCGCTTTATCTTGCATCAAAGTCCAACTATCAACACATTCTC
GACGGCACTCTGCCATCGGGTGTAAGCTATCCAGAGGCCCTGGCAGAGAACCTGAGCTCCAAGCGCACGAATCAC
AAGCTCGCAGAGCAGGGGCGCCGGAATCGAATCAACAATGCGCTTAAGGAGATTGAGCTTCTTATTCCGCAGGAA
TTCATCGATGCACGCAGCGCGAAGGATGCCGCAGAATCCGGGGGCAAGGCCAACGAGAAGGAAAAGGAGAAAGAA
AAGGCCAACCAGGCTATCAGCAAGGCTACCGCCGTGGAGATGGCCATTGATTACATCAAGGCCCTGAAGATGACT
TTGGACGCAACCAATGCCAAGTTGGCCGCCGCCGAGGCCAAGCTGTCGGACAAGCCCTACAAGGAGAGCTCAACG
TCAGCTTCAATCGTTCAATCTGAAAAGGCTCCAAACGATGTTGCCAACTCTGAAACGAAGAATTCTGAAATGAAG
AGTTCTGAGACGAAGAGTTCCCCGTGA
Transcript >Pro_DTO377G3_2|g7469.t1
ATGTCGTGGCCAGAGCAGCTGCATGAGAATAATCTCATCAGTGCGCCTGGTGAGGAAGAATTTTCCAACCTGTTT
GATTTCAACATACCTTTCCCCGAAATCGAGCACGGACCAGGAACAGGGAATATGCAACATTCCCATTCCCTACCA
ACTTCCACCGGCCCAGACTCGGATATGGCTCACCTACGATCGCATGGCATGCAATACTCGGGCCAGATGGAGGGC
CTCATGGATTTCAACGATAACGCACAGTCGCACACGAACCACGGCAACTCAATGCCTTACTCGACTCCCCATATG
ACGCCAGGCTTTTGCGCGCAGCAACCATCGCCTATGTCGCAACCGCCTACCCACCAACATTATATGCAGGGCCAC
AACATGATCCCTCCCACCCCGAACAGTATCGAGATGCATGGCAATACCGCCCGATACCCCCATCGCGTGGACGAA
ACGGATATGTACGACGGATATTCACGCATGAACGAGGAACAGGCCCTTTACACTCCTCTTATCTCACCGGCTATG
ACGCCCCTGGAGAACCAATTCCGACTCCCCGAATACACAATCCCCGGCGAATACTTTACACCTCTCACCTCTCCC
GCCCTCGAGGCCCAAAACTCCGAATCCAACAGTTACCAGTACCACGCAAGACAGGTTTCGGACATGGGCTTCGTT
CCCACAACTACGGAAGTGAACCCTCTCCCTGGAAGCTCGGCTCCACCTTCTCCTAGCATTATTCGGAAACCCAAC
ACTCGTCAGCGGCCATCAACCGCTAATCGGCTCAATAACACACGGAAGGTCAAGCAATCACCCATTATTCGGGCG
CAGCGCAAACGCAGCACCTTGGCTACCAATTCGGAGGAGTTCTACAATAGCCTTACCCAGGAGATGAACTCGACA
AAGCCGCAAAATCAGGACATCCGCTCACTCCAGCTCAGCAGCAATGAAGGTTCCGGCCAGGACTCGGTATCCCCT
GAGCCATTGTCAGAACCGATGATGCCCCCTCCCGCTCTTCCTCCCCCTCGGATGTCTCCTGCAATTGCTCCCCAT
GTTCAAAGCTCTTCTCCCGGTACTGCCGCCACCCCTGCGCTTTTGATGCGCATTCAGCGGAATCAGCATTCGCAA
GACCCCGCAGGCCAATTCCGCGGCCAAGCGCAGCTTGCAGAGCCTGAGTTCCCAGATGATATAATGGAAGATATA
TCACTTCCAGAGGCGGCCGCTCCTTCGCAGCTGCGTCCGAGACCCAACCGCATCGACACCGCTGTACGGACTCCG
TCAATCCCCACGAATGGAACACCTTTCTTGAGTCCTTCGGCGCACGATAAGCCTCTCAGTGCCTCTCTTGCTCCC
AGTCCACGCACAACTGCAATGCCGTCTCCCAGTGGTCCGGTCCCTCGGAAATCAGATACCAGGGCTGCGTCTAAT
CGGAAACGACCTAGTTTGAGTTCCACTCAGGCCAGCCCACAGTTGCGGCCCAAGATTAGTCCCAGCATTCAGCCG
CTTATGAAAGGCAACGAGGGCATGTCACAAGATGCGCTTTATCTTGCATCAAAGTCCAACTATCAACACATTCTC
GACGGCACTCTGCCATCGGGTGTAAGCTATCCAGAGGCCCTGGCAGAGAACCTGAGCTCCAAGCGCACGAATCAC
AAGCTCGCAGAGCAGGGGCGCCGGAATCGAATCAACAATGCGCTTAAGGAGATTGAGCTTCTTATTCCGCAGGAA
TTCATCGATGCACGCAGCGCGAAGGATGCCGCAGAATCCGGGGGCAAGGCCAACGAGAAGGAAAAGGAGAAAGAA
AAGGCCAACCAGGCTATCAGCAAGGCTACCGCCGTGGAGATGGCCATTGATTACATCAAGGCCCTGAAGATGACT
TTGGACGCAACCAATGCCAAGTTGGCCGCCGCCGAGGCCAAGCTGTCGGACAAGCCCTACAAGGAGAGCTCAACG
TCAGCTTCAATCGTTCAATCTGAAAAGGCTCCAAACGATGTTGCCAACTCTGAAACGAAGAATTCTGAAATGAAG
AGTTCTGAGACGAAGAGTTCCCCGTGA
Gene >Pro_DTO377G3_2|g7469.t1
ATGTCGTGGCCAGAGCAGCTGCATGAGAATAATCTCATCAGTGCGCCTGGTGAGGAAGAATTTTCCAACCTGTTT
GATTTCAACATACCTTTCCCCGAAATCGAGCACGGACCAGGAACAGGGAATATGCAACATTCCCATTCCCTACCA
ACTTCCACCGGCCCAGACTCGGATATGGCTCACCTACGATCGCATGGCATGCAATACTCGGGCCAGATGGAGGGC
CTCATGGATTTCAACGATAACGCACAGTCGCACACGAACCACGGCAACTCAATGCCTTACTCGACTCCCCATATG
ACGCCAGGCTTTTGCGCGCAGCAACCATCGCCTATGTCGCAACCGCCTACCCACCAACATTATATGCAGGGCCAC
AACATGATCCCTCCCACCCCGAACAGTATCGAGATGCATGGCAATACCGCCCGATACCCCCATCGCGTGGACGAA
ACGGATATGTACGACGGATATTCACGCATGAACGAGGAACAGGTTAGTCTTGACACAAATCCGAGAATGAATTTG
CTGGCTAACAATCAAGGCCCTTTACACTCCTCTTATCTCACCGGCTATGACGCCCCTGGAGAACCAATTCCGACT
CCCCGAATACACAATCCCCGGCGAATACTTTACACCTCTCACCTCTCCCGCCCTCGAGGCCCAAAACTCCGAATC
CAACAGTTACCAGTACCACGCAAGACAGGTTTCGGACATGGGCTTCGTTCCCACAACTACGGAAGTGAACCCTCT
CCCTGGAAGCTCGGCTCCACCTTCTCCTAGCATTATTCGGAAACCCAACACTCGTCAGCGGCCATCAACCGCTAA
TCGGCTCAATAACACACGGAAGGTCAAGCAATCACCCATTATTCGGGCGCAGCGCAAACGCAGCACCTTGGCTAC
CAATTCGGAGGAGTTCTACAATAGCCTTACCCAGGAGATGAACTCGACAAAGCCGCAAAATCAGGACATCCGCTC
ACTCCAGCTCAGCAGCAATGAAGGTTCCGGCCAGGACTCGGTATCCCCTGAGCCATTGTCAGAACCGATGATGCC
CCCTCCCGCTCTTCCTCCCCCTCGGATGTCTCCTGCAATTGCTCCCCATGTTCAAAGCTCTTCTCCCGGTACTGC
CGCCACCCCTGCGCTTTTGATGCGCATTCAGCGGAATCAGCATTCGCAAGACCCCGCAGGCCAATTCCGCGGCCA
AGCGCAGCTTGCAGAGCCTGAGTTCCCAGATGATATAATGGAAGATATATCACTTCCAGAGGCGGCCGCTCCTTC
GCAGCTGCGTCCGAGACCCAACCGCATCGACACCGCTGTACGGACTCCGTCAATCCCCACGAATGGAACACCTTT
CTTGAGTCCTTCGGCGCACGATAAGCCTCTCAGTGCCTCTCTTGCTCCCAGTCCACGCACAACTGCAATGCCGTC
TCCCAGTGGTCCGGTCCCTCGGAAATCAGATACCAGGGCTGCGTCTAATCGGAAACGACCTAGTTTGAGTTCCAC
TCAGGCCAGCCCACAGTTGCGGCCCAAGATTAGTCCCAGCATTCAGCCGCTTATGAAAGGCAACGAGGGTGAGTT
TTGACCAGAATTGAATTTCATCCCTGTTATACTGACTATATTATAGGCATGTCACAAGATGCGCTTTATCTTGCA
TCAAAGTCCAACTATCAACACATTCTCGACGGCACTCTGCCATCGGGTGTAAGCTATCCAGAGGCCCTGGCAGAG
AACCTGAGCTCCAAGCGCACGAATCACAAGCTCGCAGAGCAGGGGCGCCGGAATCGAATCAACAATGCGCTTAAG
GAGATTGAGCTTCTTATTCCGCAGGAATTCATCGATGCACGCAGCGCGAAGGATGCCGCAGAATCCGGGGGCAAG
GCCAACGAGAAGGAAAAGGAGAAAGAAAAGGCCAACCAGGCTATCAGCAAGGCTACCGCCGTGGAGATGGCCATT
GATTACATCAAGGCCCTGAAGATGACTTTGGACGCAACCAATGCCAAGTTGGCCGCCGCCGAGGCCAAGCTGTCG
GACAAGCCCTACAAGGAGAGCTCAACGTCAGCTTCAATCGTTCAATCTGAAAAGGCTCCAAACGATGTTGCCAAC
TCTGAAACGAAGAATTCTGAAATGAAGAGTTCTGAGACGAAGAGTTCCCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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