Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g7466.t1
Gene name
Location	scaffold_23:255293..257441
Strand	-
Gene length (bp)	2148
Transcript length (bp)	1953
Coding sequence length (bp)	1953
Protein length (aa)	651

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05645	RNA_pol_Rpc82	RNA polymerase III subunit RPC82	2.9E-21	186	482
PF08221	HTH_9	RNA polymerase III subunit RPC82 helix-turn-helix domain	2.6E-09	9	66

GO

GO Term	Description	Terminal node
GO:0006351	transcription, DNA-templated	Yes
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	Yes
GO:0003677	DNA binding	Yes
GO:0071704	organic substance metabolic process	No
GO:0034654	nucleobase-containing compound biosynthetic process	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0009987	cellular process	No
GO:0043170	macromolecule metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0044238	primary metabolic process	No
GO:0003824	catalytic activity	No
GO:0097659	nucleic acid-templated transcription	No
GO:0044260	cellular macromolecule metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0032774	RNA biosynthetic process	No
GO:0016740	transferase activity	No
GO:0097159	organic cyclic compound binding	No
GO:1901363	heterocyclic compound binding	No
GO:0090304	nucleic acid metabolic process	No
GO:0046483	heterocycle metabolic process	No
GO:1901362	organic cyclic compound biosynthetic process	No
GO:0034645	cellular macromolecule biosynthetic process	No
GO:0016779	nucleotidyltransferase activity	No
GO:0006807	nitrogen compound metabolic process	No
GO:0016070	RNA metabolic process	No
GO:0005488	binding	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0003676	nucleic acid binding	No
GO:0097747	RNA polymerase activity	No
GO:0009058	biosynthetic process	No
GO:0044271	cellular nitrogen compound biosynthetic process	No
GO:0019438	aromatic compound biosynthetic process	No
GO:0034062	5'-3' RNA polymerase activity	No
GO:0018130	heterocycle biosynthetic process	No
GO:0003674	molecular_function	No
GO:1901576	organic substance biosynthetic process	No
GO:0016772	transferase activity, transferring phosphorus-containing groups	No
GO:0008150	biological_process	No
GO:0140098	catalytic activity, acting on RNA	No
GO:0008152	metabolic process	No
GO:0044249	cellular biosynthetic process	No
GO:0009059	macromolecule biosynthetic process	No
GO:0044237	cellular metabolic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 25	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g7466.t1 MMMSQCSTELCMLLIEDNFGELFARIFTVLQRYERLTLPRLRFYARLTDRQLHHGLSAMIQHHLIYHFTSLDDGN TYYEANPQAAYSLVRSGKILQLVETRLGEYAAQVLEAIMSLGHSSIAHLETLPELQSKRQRIPNGVNQGENTVEN TVEDTVDGNGEKEEDSAAPNGNHVVREKPVHLHPTLKSLASHGYIHRLREAHFQSPNDNWIDASRIIASRPDVKQ MKGKQQATEIEEKAKDLVKERTEGDLSRGLIYNGLPQGAKRKRDHGNSESNKQAPNGTNGVNGDHVEDEGEEDND WSEDEDGVDSIPMDSNLIVRVNYEKLDVALRNTRFLDLAKQDAPSASVEIYDCLLRRIEYQTARCRDSYEIPREG EEGEQYSAPIQLSSIVEDVDPNLDLTGCIGPMEPSTVLNRGGKRPLDDETNGVNGDEHEDEPSGQNRAYGIDQHL SILSQPPLNLTTKHVISGLPTWRVAFRGLARKLRHLELERMIESRYGDVALRVVRVLHAKGKLDEKRLQEISLLP FKDLRQTLASMQTGGFVDLQEVPRDAQRQPSKTIYLWYYDPDRVCSSMLEDTYKAMSRCLQRIKFERGRERDFLE KTERTDVKGHEEEFLSEAELEHLRNWKAKEALLLAEVSRLDDMVAVFRDY*
Coding	>Pro_DTO377G3_2\|g7466.t1 ATGATGATGTCTCAGTGCTCTACCGAGCTTTGTATGCTCTTGATCGAAGACAATTTTGGAGAGCTCTTTGCCCGC ATCTTTACCGTCCTTCAACGTTATGAAAGACTGACTCTCCCTCGGTTGAGATTCTACGCTCGCCTGACAGATCGC CAATTGCACCATGGTCTCTCCGCTATGATCCAGCACCACCTGATATACCACTTCACTTCCCTCGATGATGGCAAT ACCTACTACGAAGCTAATCCACAAGCCGCATACTCCCTCGTGCGATCTGGAAAGATTCTCCAGCTTGTTGAAACT CGATTGGGAGAATACGCGGCTCAGGTGTTGGAAGCAATCATGAGTCTCGGTCACTCCTCGATCGCCCACCTCGAG ACGCTTCCGGAGCTTCAATCCAAGAGGCAGCGCATTCCGAATGGGGTTAATCAGGGTGAAAATACGGTCGAAAAT ACGGTCGAAGATACGGTCGATGGGAACGGGGAAAAGGAAGAAGATTCAGCTGCTCCTAACGGCAATCATGTTGTC AGGGAAAAACCGGTGCACCTTCATCCCACCTTGAAGAGTCTCGCCTCTCACGGATACATCCATCGTCTTCGAGAG GCACATTTCCAAAGTCCGAACGACAACTGGATAGATGCTTCCCGAATCATCGCGTCAAGACCAGATGTCAAACAA ATGAAAGGCAAACAGCAAGCAACGGAGATTGAGGAGAAGGCGAAGGACTTGGTCAAGGAAAGAACTGAAGGAGAT CTGAGCAGGGGCCTAATATACAACGGCCTCCCTCAAGGCGCCAAAAGAAAACGCGATCATGGCAACTCGGAGTCC AATAAGCAGGCGCCTAATGGCACTAACGGTGTCAACGGGGACCATGTAGAGGACGAGGGGGAAGAGGATAATGAT TGGTCGGAAGATGAAGATGGCGTTGATTCAATCCCAATGGATTCTAACCTTATCGTTCGGGTGAACTACGAGAAA CTCGACGTGGCGCTTCGAAACACGCGGTTCCTCGACCTTGCTAAGCAAGATGCACCTTCCGCCTCAGTTGAGATT TATGACTGTCTGCTTCGTCGCATTGAATACCAAACAGCCCGCTGCCGAGACTCTTATGAAATCCCTCGTGAAGGA GAAGAAGGCGAGCAATATTCTGCTCCAATTCAACTGAGCTCAATCGTCGAAGACGTTGACCCGAATCTGGATCTT ACAGGATGTATTGGCCCGATGGAGCCCTCAACGGTGTTAAACCGAGGCGGCAAGCGACCATTGGATGATGAGACG AATGGCGTGAATGGTGACGAGCATGAAGATGAACCGAGCGGGCAGAACCGCGCCTATGGAATTGACCAGCACCTT AGTATTCTCTCACAACCTCCCTTGAACCTTACCACAAAACACGTCATCTCCGGGCTCCCAACGTGGCGAGTTGCA TTCCGAGGCCTGGCCCGCAAGCTTCGCCATTTAGAACTGGAGCGCATGATTGAATCACGGTATGGAGATGTGGCA CTGCGGGTGGTCCGCGTCCTGCATGCCAAGGGTAAGCTTGACGAGAAACGGCTCCAAGAAATCAGTCTCCTACCC TTTAAAGATTTGCGCCAGACGCTTGCTAGCATGCAAACTGGAGGGTTTGTGGACTTGCAGGAAGTGCCGCGTGAC GCACAGCGCCAGCCTTCCAAGACAATCTACCTGTGGTACTACGATCCAGATCGAGTGTGCAGCAGTATGCTGGAG GATACGTACAAAGCCATGTCACGGTGCCTGCAGCGCATCAAATTCGAACGTGGCCGCGAGAGAGATTTTCTCGAG AAGACAGAACGAACCGACGTCAAGGGCCACGAGGAAGAATTCCTCTCGGAGGCGGAATTAGAACATCTTCGCAAC TGGAAGGCCAAGGAAGCCTTGCTGCTGGCGGAGGTATCTCGATTAGATGACATGGTTGCTGTTTTCCGTGATTAT TGA
Transcript	>Pro_DTO377G3_2\|g7466.t1 ATGATGATGTCTCAGTGCTCTACCGAGCTTTGTATGCTCTTGATCGAAGACAATTTTGGAGAGCTCTTTGCCCGC ATCTTTACCGTCCTTCAACGTTATGAAAGACTGACTCTCCCTCGGTTGAGATTCTACGCTCGCCTGACAGATCGC CAATTGCACCATGGTCTCTCCGCTATGATCCAGCACCACCTGATATACCACTTCACTTCCCTCGATGATGGCAAT ACCTACTACGAAGCTAATCCACAAGCCGCATACTCCCTCGTGCGATCTGGAAAGATTCTCCAGCTTGTTGAAACT CGATTGGGAGAATACGCGGCTCAGGTGTTGGAAGCAATCATGAGTCTCGGTCACTCCTCGATCGCCCACCTCGAG ACGCTTCCGGAGCTTCAATCCAAGAGGCAGCGCATTCCGAATGGGGTTAATCAGGGTGAAAATACGGTCGAAAAT ACGGTCGAAGATACGGTCGATGGGAACGGGGAAAAGGAAGAAGATTCAGCTGCTCCTAACGGCAATCATGTTGTC AGGGAAAAACCGGTGCACCTTCATCCCACCTTGAAGAGTCTCGCCTCTCACGGATACATCCATCGTCTTCGAGAG GCACATTTCCAAAGTCCGAACGACAACTGGATAGATGCTTCCCGAATCATCGCGTCAAGACCAGATGTCAAACAA ATGAAAGGCAAACAGCAAGCAACGGAGATTGAGGAGAAGGCGAAGGACTTGGTCAAGGAAAGAACTGAAGGAGAT CTGAGCAGGGGCCTAATATACAACGGCCTCCCTCAAGGCGCCAAAAGAAAACGCGATCATGGCAACTCGGAGTCC AATAAGCAGGCGCCTAATGGCACTAACGGTGTCAACGGGGACCATGTAGAGGACGAGGGGGAAGAGGATAATGAT TGGTCGGAAGATGAAGATGGCGTTGATTCAATCCCAATGGATTCTAACCTTATCGTTCGGGTGAACTACGAGAAA CTCGACGTGGCGCTTCGAAACACGCGGTTCCTCGACCTTGCTAAGCAAGATGCACCTTCCGCCTCAGTTGAGATT TATGACTGTCTGCTTCGTCGCATTGAATACCAAACAGCCCGCTGCCGAGACTCTTATGAAATCCCTCGTGAAGGA GAAGAAGGCGAGCAATATTCTGCTCCAATTCAACTGAGCTCAATCGTCGAAGACGTTGACCCGAATCTGGATCTT ACAGGATGTATTGGCCCGATGGAGCCCTCAACGGTGTTAAACCGAGGCGGCAAGCGACCATTGGATGATGAGACG AATGGCGTGAATGGTGACGAGCATGAAGATGAACCGAGCGGGCAGAACCGCGCCTATGGAATTGACCAGCACCTT AGTATTCTCTCACAACCTCCCTTGAACCTTACCACAAAACACGTCATCTCCGGGCTCCCAACGTGGCGAGTTGCA TTCCGAGGCCTGGCCCGCAAGCTTCGCCATTTAGAACTGGAGCGCATGATTGAATCACGGTATGGAGATGTGGCA CTGCGGGTGGTCCGCGTCCTGCATGCCAAGGGTAAGCTTGACGAGAAACGGCTCCAAGAAATCAGTCTCCTACCC TTTAAAGATTTGCGCCAGACGCTTGCTAGCATGCAAACTGGAGGGTTTGTGGACTTGCAGGAAGTGCCGCGTGAC GCACAGCGCCAGCCTTCCAAGACAATCTACCTGTGGTACTACGATCCAGATCGAGTGTGCAGCAGTATGCTGGAG GATACGTACAAAGCCATGTCACGGTGCCTGCAGCGCATCAAATTCGAACGTGGCCGCGAGAGAGATTTTCTCGAG AAGACAGAACGAACCGACGTCAAGGGCCACGAGGAAGAATTCCTCTCGGAGGCGGAATTAGAACATCTTCGCAAC TGGAAGGCCAAGGAAGCCTTGCTGCTGGCGGAGGTATCTCGATTAGATGACATGGTTGCTGTTTTCCGTGATTAT TGA
Gene	>Pro_DTO377G3_2\|g7466.t1 ATGATGATGTCTCAGGTATGCGACTGTCCCGCTAACCTCGAGAGAGCTACTTACTGACATGAACGTAGTGCTCTA CCGAGCTTTGTATGCTCTTGATCGAAGACAATTTTGGAGAGCTCTTTGCCGTGAGTCATCTTGTGCACACGCTCG GGCTATCATGGTTCTCTGCGACAGCGGGGAAGGAACCGGGCTAACTAGTCAACTTTTCGCAGCGCATCTTTACCG TCCTTCAACGTTATGAAAGACTGACTCTCCCTCGGTTGAGATTCTACGCTCGCCTGACAGATCGCCAATTGCACC ATGGTCTCTCCGCTATGATCCAGCACCACCTGATATACCACTTCACTTCCCTCGATGATGGCAATACCTACTACG AAGCTAATCCACAAGCCGCATACTCCCTCGTGCGATCTGGAAAGATTCTCCAGCTTGTTGAAACTCGATTGGGAG AATACGCGGCTCAGGTGTTGGAAGCAATCATGAGTCTCGGTCACTCCTCGATCGCCCACCTCGAGACGCTTCCGG AGCTTCAATCCAAGAGGCAGCGCATTCCGAATGGGGTTAATCAGGGTGAAAATACGGTCGAAAATACGGTCGAAG ATACGGTCGATGGGAACGGGGAAAAGGAAGAAGATTCAGCTGCTCCTAACGGCAATCATGTTGTCAGGGAAAAAC CGGTGCACCTTCATCCCACCTTGAAGAGTCTCGCCTCTCACGGATACATCCATCGTCTTCGAGAGGCACATTTCC AAAGTCCGAACGACAACTGGATAGATGCTTCCCGAATCATCGCGTCAAGACCAGATGTCAAACAAATGAAAGGCA AACAGCAAGCAACGGAGATTGAGGAGAAGGCGAAGGACTTGGTCAAGGAAAGAACTGAAGGAGATCTGAGCAGGG GCCTAATATACAACGGCCTCCCTCAAGGCGCCAAAAGAAAACGCGATCATGGCAACTCGGAGTCCAATAAGCAGG CGCCTAATGGCACTAACGGTGTCAACGGGGACCATGTAGAGGACGAGGGGGAAGAGGATAATGATTGGTCGGAAG ATGAAGATGGCGTTGATTCAATCCCAATGGATGTAAGTTTTCCTTTTTCCTTGCCACGGCTTCGGGTCAACTAAT AACCATTACCAGTCTAACCTTATCGTTCGGGTGAACTACGAGAAACTCGACGTGGCGCTTCGAAACACGCGGTTC CTCGACCTTGCTAAGCAAGATGCACCTTCCGCCTCAGTTGAGATTTATGACTGTCTGCTTCGTCGCATTGAATAC CAAACAGCCCGCTGCCGAGACTCTTATGAAATCCCTCGTGAAGGAGAAGAAGGCGAGCAATATTCTGCTCCAATT CAACTGAGCTCAATCGTCGAAGACGTTGACCCGAATCTGGATCTTACAGGATGTATTGGCCCGATGGAGCCCTCA ACGGTGTTAAACCGAGGCGGCAAGCGACCATTGGATGATGAGACGAATGGCGTGAATGGTGACGAGCATGAAGAT GAACCGAGCGGGCAGAACCGCGCCTATGGAATTGACCAGCACCTTAGTATTCTCTCACAACCTCCCTTGAACCTT ACCACAAAACACGTCATCTCCGGGCTCCCAACGTGGCGAGTTGCATTCCGAGGCCTGGCCCGCAAGCTTCGCCAT TTAGAACTGGAGCGCATGATTGAATCACGGTATGGAGATGTGGCACTGCGGGTGGTCCGCGTCCTGCATGCCAAG GGTAAGCTTGACGAGAAACGGCTCCAAGAAATCAGTCTCCTACCCTTTAAAGATTTGCGCCAGACGCTTGCTAGC ATGCAAACTGGAGGGTTTGTGGACTTGCAGGAAGTGCCGCGTGACGCACAGCGCCAGCCTTCCAAGACAATCTAC CTGTGGTACTACGATCCAGATCGAGTGTGCAGCAGTATGCTGGAGGATACGTACAAAGCCATGTCACGGTGCCTG CAGCGCATCAAATTCGAACGTGGCCGCGAGAGAGATTTTCTCGAGAAGACAGAACGAACCGACGTCAAGGGCCAC GAGGAAGAATTCCTCTCGGAGGCGGAATTAGAACATCTTCGCAACTGGAAGGCCAAGGAAGCCTTGCTGCTGGCG GAGGTATCTCGATTAGATGACATGGTTGCTGTTTTCCGTGATTATTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences