Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7465.t1
Gene name
Locationscaffold_23:253634..254235
Strand-
Gene length (bp)601
Transcript length (bp)465
Coding sequence length (bp)465
Protein length (aa) 155

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01284 MARVEL Membrane-associating domain 3.8E-20 9 131

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 40 62 22
3 75 97 22
4 112 134 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7465.t1
MALPWIYPVRIAQALFGVIVIGLTGYVVSLFYNGWSYSDTVNFLLFLGCWTAFVAVPYLVVAPIWFPRLAHRFVI
PAVEVITMIFWFAGFIALGAILPAPRWCHGSACSSLQAATVFGAIEWVLFAVTSYFSIVDLMHHRGAEAKTHTNV
QMGV*
Coding >Pro_DTO377G3_2|g7465.t1
ATGGCCCTCCCGTGGATATACCCCGTCCGAATCGCCCAAGCACTCTTCGGCGTGATCGTGATCGGTTTGACAGGA
TATGTGGTTTCATTATTCTACAATGGATGGTCATACTCGGATACCGTCAACTTCCTCCTCTTCCTCGGTTGCTGG
ACTGCCTTTGTAGCAGTGCCCTACCTCGTCGTTGCACCGATATGGTTCCCTCGCCTTGCACACCGCTTTGTGATT
CCGGCTGTTGAAGTGATCACCATGATCTTCTGGTTTGCTGGGTTTATCGCTCTGGGAGCGATATTGCCTGCGCCG
AGGTGGTGTCATGGCAGTGCATGCAGCTCGCTCCAGGCAGCAACGGTATTTGGGGCTATTGAATGGGTACTTTTT
GCGGTCACCAGCTATTTCAGTATTGTCGATCTTATGCACCACCGCGGGGCAGAAGCGAAAACACATACGAATGTG
CAGATGGGAGTCTGA
Transcript >Pro_DTO377G3_2|g7465.t1
ATGGCCCTCCCGTGGATATACCCCGTCCGAATCGCCCAAGCACTCTTCGGCGTGATCGTGATCGGTTTGACAGGA
TATGTGGTTTCATTATTCTACAATGGATGGTCATACTCGGATACCGTCAACTTCCTCCTCTTCCTCGGTTGCTGG
ACTGCCTTTGTAGCAGTGCCCTACCTCGTCGTTGCACCGATATGGTTCCCTCGCCTTGCACACCGCTTTGTGATT
CCGGCTGTTGAAGTGATCACCATGATCTTCTGGTTTGCTGGGTTTATCGCTCTGGGAGCGATATTGCCTGCGCCG
AGGTGGTGTCATGGCAGTGCATGCAGCTCGCTCCAGGCAGCAACGGTATTTGGGGCTATTGAATGGGTACTTTTT
GCGGTCACCAGCTATTTCAGTATTGTCGATCTTATGCACCACCGCGGGGCAGAAGCGAAAACACATACGAATGTG
CAGATGGGAGTCTGA
Gene >Pro_DTO377G3_2|g7465.t1
ATGGCCCTCCCGTGGATATACCCCGTCCGAATCGCCCAAGCACTCTTCGGCGTGATCGTGATCGGTTTGACAGGA
TATGGTCCGTTGCTTCAGAGCAAATTCTTGAAAATCCATGACAACTGACAAGTCTCTAGTGGTTTCATTATTCTA
CAATGGATGGTCATACTCGGATACCGTCAACTTCCTCCTCTTCCTCGGTTGCTGGACTGCCTTTGTAGCAGTGCC
CTACCTCGTCGTTGCACCGATATGGTTCCCTCGCCTTGCACACCGCTTTGTGATTCCGGCTGTTGAAGTGATCAC
CATGATCTTCTGGTTTGCTGGGTTTATCGCTCTGGGAGCGATATTGCCTGCGCCGAGGTGGTGTCATGGCAGTGC
ATGCAGCTCGCTCCAGGCAGCAACGGTATTTGGGGCTATTGAATGGTGCGTGTCTTCTACTTTTGGTTGGCGTTA
TATGATGGTACATATTGACAGAGAGCTAACAATGATTTGTGTGGCATATAGGGTACTTTTTGCGGTCACCAGCTA
TTTCAGTATTGTCGATCTTATGCACCACCGCGGGGCAGAAGCGAAAACACATACGAATGTGCAGATGGGAGTCTG
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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