Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g7420.t1
Gene name
Location	scaffold_23:125925..127671
Strand	+
Gene length (bp)	1746
Transcript length (bp)	1488
Coding sequence length (bp)	1488
Protein length (aa)	496

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00005	ABC_tran	ABC transporter	9.2E-14	287	429
PF00664	ABC_membrane	ABC transporter transmembrane region	7.3E-08	16	166

GO

GO Term	Description	Terminal node
GO:0055085	transmembrane transport	Yes
GO:0016021	integral component of membrane	Yes
GO:0005524	ATP binding	Yes
GO:0140359	ABC-type transporter activity	Yes
GO:0097367	carbohydrate derivative binding	No
GO:0051234	establishment of localization	No
GO:0022857	transmembrane transporter activity	No
GO:0030554	adenyl nucleotide binding	No
GO:0005575	cellular_component	No
GO:0015399	primary active transmembrane transporter activity	No
GO:0140657	ATP-dependent activity	No
GO:0022804	active transmembrane transporter activity	No
GO:0017076	purine nucleotide binding	No
GO:0008150	biological_process	No
GO:0006810	transport	No
GO:0043167	ion binding	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0032553	ribonucleotide binding	No
GO:0000166	nucleotide binding	No
GO:1901265	nucleoside phosphate binding	No
GO:0005488	binding	No
GO:0036094	small molecule binding	No
GO:0003674	molecular_function	No
GO:0097159	organic cyclic compound binding	No
GO:0042626	ATPase-coupled transmembrane transporter activity	No
GO:0032555	purine ribonucleotide binding	No
GO:0051179	localization	No
GO:0031224	intrinsic component of membrane	No
GO:0005215	transporter activity	No
GO:0110165	cellular anatomical entity	No
GO:1901363	heterocyclic compound binding	No
GO:0043168	anion binding	No
GO:0009987	cellular process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 33	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	15	37	22
2	107	129	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	1.46	0.19	2.73
5d_25C	Five days - 25 degrees Celsius	4.07	1.20	6.94
7d_25C	Seven days - 25 degrees Celsius	5.69	1.86	9.52
10d_25C	Ten days - 25 degrees Celsius	10.00	4.17	15.83
7d_15C	Seven days - 15 degrees Celsius	4.44	1.35	7.52
7d_30C	Seven days - 30 degrees Celsius	7.38	2.64	12.13

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.015558	yes
3d_25C	7d_25C	0.001804	yes
3d_25C	7d_15C	0.008807	yes
3d_25C	7d_30C	0.000700	yes
3d_25C	10d_25C	0.000700	yes
5d_25C	7d_25C	0.440407	no
5d_25C	7d_15C	0.878291	no
5d_25C	7d_30C	0.105675	no
5d_25C	10d_25C	0.004045	yes
7d_25C	7d_15C	0.601896	no
7d_25C	7d_30C	0.564310	no
7d_25C	10d_25C	0.115508	no
7d_15C	7d_30C	0.182746	no
7d_15C	10d_25C	0.017204	yes
7d_30C	10d_25C	0.441673	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g7420.t1 MLNWLDDPSTALNDGYGLIGATILIYLGMALSTLSYNHMLNRFTTIFRGAASSMIYNHALRIPDGALEDRSATIT LMTTDIDRIIDCLVTLNECWARTIEVAIGISLLALRMGWVCLMPLIIVILSSLGSTYISKNISGQQKNWVDTVQQ RIAITRSMLADIQTVKRIGLIYAAQGKELDISKTLSSLSIITLLTSPASKLLSAVPSTAAATGCFDRIQSFLMVP TGQHHPDTTSITTEETHIHMSDSSGELQPISFLSSGTADPTFPVISMERVNIRPVPSAKIVLRDISIQVPAGNLV IIRGPVGSGKTTLLRAILSQAVCEKGVTTVKIKNPTLCAQIPWIPRGTIREAICGVTATGSVTTHGIDCEWYADV LHTYALLPDLELFPEGDTTQIGNRSGNKFSGGQMHRIALTRAVYTRRKLLLLDDILSALDRKTKAIIIERLFGGN GLLRRTMSTVIMVTHEIDYLSYTDQVLALSDGNLRREEARERTVY*
Coding	>Pro_DTO377G3_2\|g7420.t1 ATGCTTAACTGGCTTGATGATCCATCTACCGCGTTGAACGACGGCTACGGTCTTATCGGCGCCACTATTCTTATA TACCTAGGCATGGCTCTTTCTACACTGTCGTATAACCACATGCTAAATCGGTTCACGACAATTTTCCGAGGGGCC GCTTCGTCGATGATCTATAACCATGCGTTGCGCATCCCCGATGGGGCACTAGAGGATCGTTCGGCCACAATTACT CTCATGACCACCGATATTGACCGGATTATCGATTGCCTAGTGACTTTGAATGAATGCTGGGCTCGTACTATTGAG GTCGCGATTGGCATTTCGCTGCTTGCTCTTCGTATGGGATGGGTTTGTCTGATGCCATTGATTATCGTAATCCTA TCTAGCCTAGGGAGCACATATATCTCGAAGAATATTAGTGGGCAGCAGAAAAATTGGGTTGATACTGTTCAGCAG CGCATCGCAATCACCCGTTCAATGCTGGCTGATATCCAAACTGTTAAGCGGATAGGGTTGATCTACGCTGCTCAA GGAAAGGAACTTGATATTAGCAAGACCCTCAGCAGTCTGTCAATTATAACACTTCTCACTAGCCCGGCCTCTAAG CTGCTTAGTGCGGTTCCTTCCACGGCGGCCGCTACGGGATGCTTTGATAGAATCCAATCATTTCTCATGGTGCCG ACTGGTCAGCATCACCCAGATACAACTTCTATTACCACGGAAGAAACTCACATTCACATGAGCGATAGCTCTGGT GAGCTGCAACCCATATCATTCTTGAGCAGCGGCACTGCTGATCCTACATTCCCCGTCATATCTATGGAACGAGTC AATATCCGCCCAGTTCCATCGGCAAAGATAGTACTGCGGGATATCAGCATCCAAGTTCCAGCTGGAAATCTAGTA ATCATTCGGGGACCAGTGGGATCCGGGAAAACAACTCTGCTTCGGGCTATACTTAGCCAAGCAGTTTGCGAGAAA GGGGTAACTACAGTAAAAATCAAAAACCCGACCCTTTGCGCGCAAATCCCCTGGATCCCGAGGGGCACCATCCGA GAAGCAATTTGCGGGGTAACTGCTACAGGATCAGTAACCACTCACGGTATTGACTGTGAATGGTATGCGGACGTT CTTCATACATATGCTCTGCTTCCAGACCTGGAATTGTTTCCTGAGGGTGATACCACGCAAATCGGCAATAGATCC GGGAATAAGTTCAGCGGCGGTCAAATGCATCGAATTGCCCTTACACGGGCTGTGTATACCCGTAGGAAACTTTTG TTATTAGATGATATACTCAGTGCACTAGACCGGAAAACAAAGGCCATCATAATAGAGCGTCTCTTCGGAGGTAAC GGACTTCTGCGAAGAACAATGTCGACCGTTATAATGGTGACTCATGAGATTGATTATCTATCTTATACGGATCAA GTTCTGGCTCTTTCGGACGGGAATCTTCGCCGGGAAGAGGCCCGCGAGAGAACCGTCTACTAA
Transcript	>Pro_DTO377G3_2\|g7420.t1 ATGCTTAACTGGCTTGATGATCCATCTACCGCGTTGAACGACGGCTACGGTCTTATCGGCGCCACTATTCTTATA TACCTAGGCATGGCTCTTTCTACACTGTCGTATAACCACATGCTAAATCGGTTCACGACAATTTTCCGAGGGGCC GCTTCGTCGATGATCTATAACCATGCGTTGCGCATCCCCGATGGGGCACTAGAGGATCGTTCGGCCACAATTACT CTCATGACCACCGATATTGACCGGATTATCGATTGCCTAGTGACTTTGAATGAATGCTGGGCTCGTACTATTGAG GTCGCGATTGGCATTTCGCTGCTTGCTCTTCGTATGGGATGGGTTTGTCTGATGCCATTGATTATCGTAATCCTA TCTAGCCTAGGGAGCACATATATCTCGAAGAATATTAGTGGGCAGCAGAAAAATTGGGTTGATACTGTTCAGCAG CGCATCGCAATCACCCGTTCAATGCTGGCTGATATCCAAACTGTTAAGCGGATAGGGTTGATCTACGCTGCTCAA GGAAAGGAACTTGATATTAGCAAGACCCTCAGCAGTCTGTCAATTATAACACTTCTCACTAGCCCGGCCTCTAAG CTGCTTAGTGCGGTTCCTTCCACGGCGGCCGCTACGGGATGCTTTGATAGAATCCAATCATTTCTCATGGTGCCG ACTGGTCAGCATCACCCAGATACAACTTCTATTACCACGGAAGAAACTCACATTCACATGAGCGATAGCTCTGGT GAGCTGCAACCCATATCATTCTTGAGCAGCGGCACTGCTGATCCTACATTCCCCGTCATATCTATGGAACGAGTC AATATCCGCCCAGTTCCATCGGCAAAGATAGTACTGCGGGATATCAGCATCCAAGTTCCAGCTGGAAATCTAGTA ATCATTCGGGGACCAGTGGGATCCGGGAAAACAACTCTGCTTCGGGCTATACTTAGCCAAGCAGTTTGCGAGAAA GGGGTAACTACAGTAAAAATCAAAAACCCGACCCTTTGCGCGCAAATCCCCTGGATCCCGAGGGGCACCATCCGA GAAGCAATTTGCGGGGTAACTGCTACAGGATCAGTAACCACTCACGGTATTGACTGTGAATGGTATGCGGACGTT CTTCATACATATGCTCTGCTTCCAGACCTGGAATTGTTTCCTGAGGGTGATACCACGCAAATCGGCAATAGATCC GGGAATAAGTTCAGCGGCGGTCAAATGCATCGAATTGCCCTTACACGGGCTGTGTATACCCGTAGGAAACTTTTG TTATTAGATGATATACTCAGTGCACTAGACCGGAAAACAAAGGCCATCATAATAGAGCGTCTCTTCGGAGGTAAC GGACTTCTGCGAAGAACAATGTCGACCGTTATAATGGTGACTCATGAGATTGATTATCTATCTTATACGGATCAA GTTCTGGCTCTTTCGGACGGGAATCTTCGCCGGGAAGAGGCCCGCGAGAGAACCGTCTACTAA
Gene	>Pro_DTO377G3_2\|g7420.t1 ATGCTTAACTGGCTTGATGATCCATCTACCGCGTTGAACGACGGCTACGGTCTTATCGGCGCCACTATTCTTATA TACCTAGGCATGGCTCTTTCTACACTGTCGTATAACCACATGCTAAATCGGTTCACGACAATTTTCCGAGGGGCC GCTTCGTCGATGATCTATAACCATGCGTTGCGCATCCCCGATGGGGCACTAGAGGATCGTTCGGCCACAATTACT CTCATGACCACCGATATTGACCGGATTATCGATTGCCTAGTGACTTTGAATGAATGCTGGGCTCGTACTATTGAG GTCGCGATTGGCATTTCGCTGCTTGCTCTTCGTATGGGATGGGTTTGTCTGATGCCATTGATTATCGTAATCCGT GGGTATCCCAATCACTTCACATCACGCTACCGGTTGCTGATAATTTTGCATAGTATCTAGCCTAGGGAGCACATA TATCTCGAAGAATATTAGTGGGCAGCAGAAAAATTGGGTTGATACTGTTCAGCAGCGCATCGCAATCACCCGTTC AATGCTGGCTGATATCCAAACTGTTAAGCGGATAGGGTTGAGTAAGACCTTTCTTCATATCATACAGAACAAACG AGTCCAAGAAACTCATCAAATGGCCAAATATCGATGGAGCATCGTTTAGCAAAACATGATCCAGAATCTACCATG GGCATTAGCACCAGCTTTGACCTTCACAGTCTACGCTGCTCAAGGAAAGGAACTTGATATTAGCAAGACCCTCAG CAGTCTGTCAATTATAACACTTCTCACTAGCCCGGCCTCTAAGCTGCTTAGTGCGGTTCCTTCCACGGCGGCCGC TACGGGATGCTTTGATAGAATCCAATCATTTCTCATGGTGCCGACTGGTCAGCATCACCCAGATACAACTTCTAT TACCACGGAAGAAACTCACATTCACATGAGCGATAGCTCTGGTGAGCTGCAACCCATATCATTCTTGAGCAGCGG CACTGCTGATCCTACATTCCCCGTCATATCTATGGAACGAGTCAATATCCGCCCAGTTCCATCGGCAAAGATAGT ACTGCGGGATATCAGCATCCAAGTTCCAGCTGGAAATCTAGTAATCATTCGGGGACCAGTGGGATCCGGGAAAAC AACTCTGCTTCGGGCTATACTTAGCCAAGCAGTTTGCGAGAAAGGGGTAACTACAGTAAAAATCAAAAACCCGAC CCTTTGCGCGCAAATCCCCTGGATCCCGAGGGGCACCATCCGAGAAGCAATTTGCGGGGTAACTGCTACAGGATC AGTAACCACTCACGGTATTGACTGTGAATGGTATGCGGACGTTCTTCATACATATGCTCTGCTTCCAGACCTGGA ATTGTTTCCTGAGGGTGATACCACGCAAATCGGCAATAGATCCGGGAATAAGTTCAGCGGCGGTCAAATGCATCG AATTGCCCTTACACGGGCTGTGTATACCCGTAGGAAACTTTTGTTATTAGATGATATACTCAGTGCACTAGACCG GAAAACAAAGGCCATCATAATAGAGCGTCTCTTCGGAGGTAACGGACTTCTGCGAAGAACAATGTCGACCGTTAT AATGGTGACTCATGAGAGTAGGGCTCCCTTTAACAGCCCCGATGCCGCAAATCCCTAGTGTTGTGCACTGACCAC TCGACAGTTGATTATCTATCTTATACGGATCAAGTTCTGGCTCTTTCGGACGGGAATCTTCGCCGGGAAGAGGCC CGCGAGAGAACCGTCTACTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences