Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g741.t1
Gene name
Locationscaffold_01:1898999..1900643
Strand-
Gene length (bp)1644
Transcript length (bp)1542
Coding sequence length (bp)1542
Protein length (aa) 514

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 1.5E-29 348 503
PF00173 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain 2.4E-20 7 78
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 5.3E-19 245 334
PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain 4.1E-09 115 206

GO

GO Term Description Terminal node
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:1901265 nucleoside phosphate binding No
GO:0016491 oxidoreductase activity No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0036094 small molecule binding No

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g741.t1
MSSETLTRAEVAKHNTEDSLWCIIDHQVYDLTDFVDAHPGGAVVLAQIAGQDATSDFYNLHRQEVLEKYRDQLCI
GVIEGEKPEVIVPVPGGLSPVPYAEPLWLRPQFKSPYYKESHRRLQKAVREFTDKYVTPEAQEKERDGTYISQEL
INRMAETNLLAMRLGPGKHLHGRTLLGGVVDGKEFDYLHDMIVTQELVRANARGFQDGNMAGMAISLTAVQQWLH
DPVLKERINGEVLSGQKKMCLAVTEAFAGSDVAGLKTTAEKTPDGKHYIVNGTKKWITNGMFADYFVTACRTEKG
FSVLLIPRGEGVETKQIKTSYSTAAGTAFVQYENVKVPVQNLLGEEHKGFLVIMSNFNHERFMMVAAVVRMSMVV
VEETMKWSNQRIVFGKKLIEQPVIRQKLARMISLAESNQAWLESIAYQMCNMTYAEQAKNLGGPIGLLKSHCTQA
AGEIASLATNIFGGRGITQSGMGKVIEMFHRTYKFDAILGGTEEILADLGVRQAMKNFPKSML*
Coding >Pro_DTO377G3_2|g741.t1
ATGTCATCAGAAACCCTGACGCGCGCGGAAGTCGCGAAGCACAACACCGAGGATTCCCTCTGGTGTATCATCGAC
CACCAAGTCTATGATCTAACCGATTTTGTCGACGCCCATCCCGGTGGTGCTGTTGTACTTGCTCAGATTGCTGGC
CAGGACGCAACATCCGATTTCTACAATCTGCACCGCCAGGAGGTGCTGGAGAAATACCGTGACCAGCTTTGCATT
GGTGTCATCGAAGGCGAAAAGCCCGAGGTCATCGTGCCCGTCCCTGGAGGTTTGAGCCCCGTGCCCTACGCAGAA
CCCCTGTGGCTGCGACCCCAGTTCAAGTCCCCATACTACAAGGAAAGCCACCGACGCTTGCAAAAGGCCGTCCGG
GAGTTCACAGATAAATATGTAACGCCAGAAGCGCAAGAGAAGGAGCGGGATGGCACCTACATCAGCCAGGAGCTC
ATCAATCGCATGGCCGAGACGAACCTTCTGGCTATGCGACTGGGCCCTGGAAAGCATCTGCATGGCCGCACCTTG
CTCGGTGGAGTTGTGGATGGAAAGGAGTTTGATTATCTCCACGATATGATTGTAACACAGGAGTTGGTCCGTGCC
AATGCGAGAGGCTTCCAGGATGGAAATATGGCAGGCATGGCTATTAGTTTGACAGCTGTCCAGCAATGGCTGCAC
GATCCTGTACTCAAGGAGCGCATCAATGGCGAGGTCTTGTCCGGCCAGAAAAAGATGTGTTTGGCTGTCACGGAG
GCCTTTGCTGGTAGCGACGTGGCGGGTCTGAAGACGACTGCAGAGAAGACTCCTGATGGGAAACATTATATTGTC
AACGGAACAAAGAAATGGATTACAAACGGTATGTTCGCCGACTACTTTGTCACTGCCTGCCGTACCGAGAAGGGA
TTCTCCGTGCTCTTGATTCCTCGCGGCGAAGGTGTGGAGACAAAGCAAATCAAGACCTCATATTCGACTGCCGCT
GGTACTGCTTTCGTGCAATATGAGAATGTCAAGGTTCCGGTTCAGAACCTCCTGGGTGAGGAGCACAAAGGTTTC
CTCGTTATCATGAGCAACTTCAACCACGAGCGCTTTATGATGGTAGCTGCCGTGGTCCGCATGTCAATGGTGGTT
GTCGAAGAAACAATGAAATGGTCCAATCAACGCATCGTCTTTGGTAAGAAGTTGATTGAACAGCCAGTTATTCGT
CAGAAGCTCGCCCGCATGATCTCCCTAGCCGAATCTAACCAGGCATGGCTTGAATCCATCGCCTATCAAATGTGC
AACATGACATACGCCGAACAAGCAAAGAATCTGGGTGGACCTATCGGACTGCTCAAATCACACTGTACCCAAGCC
GCAGGCGAAATTGCCAGTCTCGCTACAAACATCTTTGGTGGTCGTGGTATCACTCAGTCAGGAATGGGCAAGGTC
ATTGAGATGTTCCATCGCACATACAAGTTTGATGCCATCTTGGGTGGAACTGAGGAGATTTTGGCGGATTTGGGA
GTGCGGCAGGCAATGAAGAATTTCCCGAAGTCGATGTTATAG
Transcript >Pro_DTO377G3_2|g741.t1
ATGTCATCAGAAACCCTGACGCGCGCGGAAGTCGCGAAGCACAACACCGAGGATTCCCTCTGGTGTATCATCGAC
CACCAAGTCTATGATCTAACCGATTTTGTCGACGCCCATCCCGGTGGTGCTGTTGTACTTGCTCAGATTGCTGGC
CAGGACGCAACATCCGATTTCTACAATCTGCACCGCCAGGAGGTGCTGGAGAAATACCGTGACCAGCTTTGCATT
GGTGTCATCGAAGGCGAAAAGCCCGAGGTCATCGTGCCCGTCCCTGGAGGTTTGAGCCCCGTGCCCTACGCAGAA
CCCCTGTGGCTGCGACCCCAGTTCAAGTCCCCATACTACAAGGAAAGCCACCGACGCTTGCAAAAGGCCGTCCGG
GAGTTCACAGATAAATATGTAACGCCAGAAGCGCAAGAGAAGGAGCGGGATGGCACCTACATCAGCCAGGAGCTC
ATCAATCGCATGGCCGAGACGAACCTTCTGGCTATGCGACTGGGCCCTGGAAAGCATCTGCATGGCCGCACCTTG
CTCGGTGGAGTTGTGGATGGAAAGGAGTTTGATTATCTCCACGATATGATTGTAACACAGGAGTTGGTCCGTGCC
AATGCGAGAGGCTTCCAGGATGGAAATATGGCAGGCATGGCTATTAGTTTGACAGCTGTCCAGCAATGGCTGCAC
GATCCTGTACTCAAGGAGCGCATCAATGGCGAGGTCTTGTCCGGCCAGAAAAAGATGTGTTTGGCTGTCACGGAG
GCCTTTGCTGGTAGCGACGTGGCGGGTCTGAAGACGACTGCAGAGAAGACTCCTGATGGGAAACATTATATTGTC
AACGGAACAAAGAAATGGATTACAAACGGTATGTTCGCCGACTACTTTGTCACTGCCTGCCGTACCGAGAAGGGA
TTCTCCGTGCTCTTGATTCCTCGCGGCGAAGGTGTGGAGACAAAGCAAATCAAGACCTCATATTCGACTGCCGCT
GGTACTGCTTTCGTGCAATATGAGAATGTCAAGGTTCCGGTTCAGAACCTCCTGGGTGAGGAGCACAAAGGTTTC
CTCGTTATCATGAGCAACTTCAACCACGAGCGCTTTATGATGGTAGCTGCCGTGGTCCGCATGTCAATGGTGGTT
GTCGAAGAAACAATGAAATGGTCCAATCAACGCATCGTCTTTGGTAAGAAGTTGATTGAACAGCCAGTTATTCGT
CAGAAGCTCGCCCGCATGATCTCCCTAGCCGAATCTAACCAGGCATGGCTTGAATCCATCGCCTATCAAATGTGC
AACATGACATACGCCGAACAAGCAAAGAATCTGGGTGGACCTATCGGACTGCTCAAATCACACTGTACCCAAGCC
GCAGGCGAAATTGCCAGTCTCGCTACAAACATCTTTGGTGGTCGTGGTATCACTCAGTCAGGAATGGGCAAGGTC
ATTGAGATGTTCCATCGCACATACAAGTTTGATGCCATCTTGGGTGGAACTGAGGAGATTTTGGCGGATTTGGGA
GTGCGGCAGGCAATGAAGAATTTCCCGAAGTCGATGTTATAG
Gene >Pro_DTO377G3_2|g741.t1
ATGTCATCAGAAACCCTGACGCGCGCGGAAGTCGCGAAGCACAACACCGAGGATTCCCTCTGGTGTATCATCGAC
CACCAAGTCTATGATCTAACCGATTTTGTCGACGCCCATCCCGGTGGTGCTGTTGTACTTGCTCAGATTGCTGGC
CAGGACGCAACATCCGATTTCTACAATCTGCACCGCCAGGAGGTGCTGGAGAAATACCGTGACCAGCTTTGCATT
GGTGTCATCGAAGGCGAAAAGCCCGAGGTCATCGTGCCCGTCCCTGGAGGTTTGAGCCCCGTGCCCTACGCAGAA
CCCCTGTGGCTGCGACCCCAGTTCAAGTCCCCATACTACAAGGAAAGCCACCGACGCTTGCAAAAGGCCGTCCGG
GAGTTCACAGATAAATATGTAACGCCAGAAGCGCAAGAGAAGGAGCGGGATGGCACCTACATCAGCCAGGAGCTC
ATCAATCGCATGGCCGAGACGAACCTTCTGGCTATGCGACTGGGCCCTGGAAAGCATCTGCATGGCCGCACCTTG
CTCGGTGGAGTTGTGGATGGAAAGGAGTTTGATTATCTCCACGATATGATTGTAACACAGGAGTTGGTCCGTGCC
AATGCGAGAGGCTTCCAGGATGGAAATATGGCAGGCATGGCTATTAGTTTGACAGCTGTCCAGCAATGGCTGCAC
GATCCTGTACTCAAGGAGCGCATCAATGGCGAGGTCTTGTCCGGCCAGAAAAAGATGTGTTTGGCTGTCACGGAG
GCCTTTGCTGGTAGCGACGTGGCGGGTCTGAAGACGACTGCAGAGAAGACTCCTGATGGGAAACATTATATTGTC
AACGGAACAAAGTCAGTCGGATCACGTTTGTTGTTTAATTGGATTTGCGCTGACAATGTCTAGGAAATGGATTAC
AAACGGTATGTTCGCCGACTACTTTGTCACTGCCTGCCGTACCGAGAAGGGATTCTCCGTGCTCTTGATTCCTCG
CGGCGAAGGTGTGGAGACAAAGCAAATCAAGACCTCATATTCGACTGCCGCTGGTACTGCTTTCGTGCAATATGA
GAATGTCAAGGTTCCGGTTCAGAACCTCCTGGGTGAGGAGCACAAAGGTTTCCTCGTTATCATGAGCAACTTCAA
CCACGAGCGCTTTATGATGGTAGCTGCCGTGGTCCGCATGTCAATGGTGGTTGTCGAAGAAACAATGAAATGGTC
CAATCAACGCATCGTCTTTGGTAAGAAGTTGATTGAACAGCCAGTTATTCGTCAGAAGTGAGTTTCTTACAATCT
GCTCTTAATATCCCTCTTCTAACTCCCGACAGGCTCGCCCGCATGATCTCCCTAGCCGAATCTAACCAGGCATGG
CTTGAATCCATCGCCTATCAAATGTGCAACATGACATACGCCGAACAAGCAAAGAATCTGGGTGGACCTATCGGA
CTGCTCAAATCACACTGTACCCAAGCCGCAGGCGAAATTGCCAGTCTCGCTACAAACATCTTTGGTGGTCGTGGT
ATCACTCAGTCAGGAATGGGCAAGGTCATTGAGATGTTCCATCGCACATACAAGTTTGATGCCATCTTGGGTGGA
ACTGAGGAGATTTTGGCGGATTTGGGAGTGCGGCAGGCAATGAAGAATTTCCCGAAGTCGATGTTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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