Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g7409.t1
Gene name
Locationscaffold_23:95091..96083
Strand+
Gene length (bp)992
Transcript length (bp)876
Coding sequence length (bp)876
Protein length (aa) 292

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 9.6E-41 10 206
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.0E-29 15 205

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g7409.t1
MMGSHIETRVAIVAGATSGMGVDLAKDLCTKGWKVACVGRRQEAGEALLKDLPQDRAHFFAADVSNYEEYASVFS
KVYHLWGRIDALCANAGIVDTSSIYIYDAKTNSIDNIPPAPDLSVVDINYKGVVYGTQLAIHFMRHNPQPGGRIV
VTGSIGAIFPHESYPVYCGSKAAVNHFIRGVAPLLKQKENIFINCVMPGIVSTPIVPPEMIAAVTPECLTSVQTI
LKGYETFLEDSTGLSGQLLECSADKLIYYQMPEPGNGHITKRAVTVWEPLFRIMHGEDSGLPDAIP*
Coding >Pro_DTO377G3_2|g7409.t1
ATGATGGGTTCACATATTGAAACACGGGTTGCTATTGTCGCAGGGGCCACTTCTGGAATGGGAGTTGATCTCGCC
AAGGACCTCTGCACAAAAGGATGGAAGGTTGCTTGTGTAGGTCGGCGCCAGGAGGCCGGTGAAGCCCTCCTAAAA
GACCTACCGCAAGACAGAGCGCATTTCTTCGCCGCTGATGTCTCCAACTACGAAGAATACGCGAGTGTATTCAGC
AAAGTGTATCACCTCTGGGGGCGTATTGATGCTTTATGTGCCAATGCCGGTATTGTCGATACATCTTCTATCTAC
ATCTACGACGCGAAGACCAACAGCATCGACAACATCCCGCCGGCACCGGACCTGTCTGTCGTGGATATCAACTAC
AAAGGCGTTGTGTATGGGACCCAGCTGGCAATCCATTTCATGCGCCATAACCCGCAGCCTGGTGGTCGTATTGTT
GTCACGGGTAGTATTGGCGCGATCTTTCCCCACGAGTCGTATCCGGTATATTGTGGCTCCAAGGCTGCGGTAAAC
CACTTTATACGGGGTGTTGCCCCATTGCTGAAGCAAAAGGAGAATATTTTCATCAATTGTGTCATGCCGGGGATT
GTGAGCACGCCTATTGTGCCACCCGAGATGATTGCCGCTGTCACGCCTGAATGTCTCACCTCTGTGCAGACCATT
CTCAAAGGCTACGAAACCTTCCTAGAAGACTCGACCGGCCTGTCGGGTCAGCTGTTAGAGTGTTCAGCCGACAAG
CTGATCTACTACCAGATGCCTGAACCTGGAAATGGCCATATCACCAAGCGGGCTGTCACGGTCTGGGAGCCACTG
TTTCGTATCATGCACGGGGAAGACTCTGGGCTTCCGGATGCTATTCCGTGA
Transcript >Pro_DTO377G3_2|g7409.t1
ATGATGGGTTCACATATTGAAACACGGGTTGCTATTGTCGCAGGGGCCACTTCTGGAATGGGAGTTGATCTCGCC
AAGGACCTCTGCACAAAAGGATGGAAGGTTGCTTGTGTAGGTCGGCGCCAGGAGGCCGGTGAAGCCCTCCTAAAA
GACCTACCGCAAGACAGAGCGCATTTCTTCGCCGCTGATGTCTCCAACTACGAAGAATACGCGAGTGTATTCAGC
AAAGTGTATCACCTCTGGGGGCGTATTGATGCTTTATGTGCCAATGCCGGTATTGTCGATACATCTTCTATCTAC
ATCTACGACGCGAAGACCAACAGCATCGACAACATCCCGCCGGCACCGGACCTGTCTGTCGTGGATATCAACTAC
AAAGGCGTTGTGTATGGGACCCAGCTGGCAATCCATTTCATGCGCCATAACCCGCAGCCTGGTGGTCGTATTGTT
GTCACGGGTAGTATTGGCGCGATCTTTCCCCACGAGTCGTATCCGGTATATTGTGGCTCCAAGGCTGCGGTAAAC
CACTTTATACGGGGTGTTGCCCCATTGCTGAAGCAAAAGGAGAATATTTTCATCAATTGTGTCATGCCGGGGATT
GTGAGCACGCCTATTGTGCCACCCGAGATGATTGCCGCTGTCACGCCTGAATGTCTCACCTCTGTGCAGACCATT
CTCAAAGGCTACGAAACCTTCCTAGAAGACTCGACCGGCCTGTCGGGTCAGCTGTTAGAGTGTTCAGCCGACAAG
CTGATCTACTACCAGATGCCTGAACCTGGAAATGGCCATATCACCAAGCGGGCTGTCACGGTCTGGGAGCCACTG
TTTCGTATCATGCACGGGGAAGACTCTGGGCTTCCGGATGCTATTCCGTGA
Gene >Pro_DTO377G3_2|g7409.t1
ATGATGGGTTCACATATTGAAACACGGGTTGCTATTGTCGCAGGGGCCACTGTCAGTACGAAACCAACTACACAG
GACCCGCTATCAGTCACTGACAAAGATCCGTACAGTCTGGAATGGGAGTTGATCTCGCCAAGGACCTCTGCACAA
AAGGATGGAAGGTTGCTTGTGTAGGTCGGCGCCAGGAGGCCGGTGAAGCCCTCCTAAAAGACCTACCGCAAGACA
GAGCGCATTTCTTCGCCGCTGATGTCTCCAACTACGAAGAATACGCGAGTGTATTCAGCAAAGTGTATCACCTCT
GGGGGCGTATTGATGCTTTATGTGCCAATGCCGGTATTGTCGATACATCTTCTATCTACATCTACGACGCGAAGA
CCAACAGCATCGACAACATCCCGCCGGCACCGGACCTGTCTGTCGTGGATATCAACTACAAAGGCGTTGTGTATG
GGACCCAGCTGGCAATCCATTTCATGCGCCATAACCCGCAGCCTGGTGGTCGTATTGTTGTCACGGGTAGTATTG
GCGCGATCTTTCCCCACGAGTCGTATCCGGTATATTGTGGCTCCAAGGCTGCGGTAAACCACTTTATACGGGGTG
TTGCCCCATTGCTGAAGCAAAAGGAGAATATTTTCATCAATTGTGTCATGCCGGGGATTGTGAGCACGCCTATTG
TGCCACCCGAGATGATTGCCGCTGTCACGCCTGAATGGTAAGATTTTGTGTTGCTCTTGAACATTGCAGAACACT
GACATCACTTTGAAATTAGTCTCACCTCTGTGCAGACCATTCTCAAAGGCTACGAAACCTTCCTAGAAGACTCGA
CCGGCCTGTCGGGTCAGCTGTTAGAGTGTTCAGCCGACAAGCTGATCTACTACCAGATGCCTGAACCTGGAAATG
GCCATATCACCAAGCGGGCTGTCACGGTCTGGGAGCCACTGTTTCGTATCATGCACGGGGAAGACTCTGGGCTTC
CGGATGCTATTCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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