Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g74.t1
Gene name
Locationscaffold_01:190170..190957
Strand+
Gene length (bp)787
Transcript length (bp)606
Coding sequence length (bp)606
Protein length (aa) 202

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01741 MscL Large-conductance mechanosensitive channel, MscL 3.0E-18 26 133

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.5

Transmembrane Domains

Domain # Start End Length
1 54 73 19
2 108 130 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g74.t1
MRGLDDSTDVFIRTGQKAQKHVRLAWEGFINFAARDNVLEVALGLIIANAFTKVVTSFVTDIILPIVSLLPFLNR
NMDQKFAVLSKGPTYDQQNGYNTLYQAREDGALVLAYGLFAETVLNFLGVSLTLYAVGNMYMMIFPDKIIKPTVR
CPYCRQYISKQALRCRHCSTWQDGREDEPRSDKSSREELAGAEPSRAGQIS*
Coding >Pro_DTO377G3_2|g74.t1
ATGCGCGGTCTCGACGATAGCACTGATGTATTTATACGCACTGGCCAAAAGGCCCAGAAACATGTGCGGCTTGCT
TGGGAGGGCTTCATCAATTTTGCGGCACGGGATAACGTTCTCGAGGTTGCGTTGGGTTTGATTATAGCCAATGCG
TTCACTAAAGTCGTCACATCTTTCGTCACAGACATAATTCTGCCGATTGTCTCTCTACTGCCATTCCTGAACCGA
AACATGGATCAGAAATTCGCCGTTCTCTCCAAGGGTCCGACTTACGACCAGCAGAATGGGTATAATACCCTATAT
CAAGCGAGAGAAGATGGTGCACTGGTTCTGGCTTATGGACTGTTTGCCGAGACAGTTCTCAACTTCCTGGGTGTC
AGTCTTACTCTATACGCGGTCGGAAATATGTACATGATGATCTTTCCCGACAAGATCATCAAGCCTACTGTCCGG
TGTCCATACTGCAGGCAGTATATCAGTAAACAGGCGCTTCGCTGTCGCCATTGCTCAACATGGCAAGACGGAAGG
GAAGACGAGCCTCGGAGTGATAAAAGCTCTCGCGAGGAACTGGCTGGTGCCGAGCCGAGTCGTGCTGGGCAAATT
TCCTAG
Transcript >Pro_DTO377G3_2|g74.t1
ATGCGCGGTCTCGACGATAGCACTGATGTATTTATACGCACTGGCCAAAAGGCCCAGAAACATGTGCGGCTTGCT
TGGGAGGGCTTCATCAATTTTGCGGCACGGGATAACGTTCTCGAGGTTGCGTTGGGTTTGATTATAGCCAATGCG
TTCACTAAAGTCGTCACATCTTTCGTCACAGACATAATTCTGCCGATTGTCTCTCTACTGCCATTCCTGAACCGA
AACATGGATCAGAAATTCGCCGTTCTCTCCAAGGGTCCGACTTACGACCAGCAGAATGGGTATAATACCCTATAT
CAAGCGAGAGAAGATGGTGCACTGGTTCTGGCTTATGGACTGTTTGCCGAGACAGTTCTCAACTTCCTGGGTGTC
AGTCTTACTCTATACGCGGTCGGAAATATGTACATGATGATCTTTCCCGACAAGATCATCAAGCCTACTGTCCGG
TGTCCATACTGCAGGCAGTATATCAGTAAACAGGCGCTTCGCTGTCGCCATTGCTCAACATGGCAAGACGGAAGG
GAAGACGAGCCTCGGAGTGATAAAAGCTCTCGCGAGGAACTGGCTGGTGCCGAGCCGAGTCGTGCTGGGCAAATT
TCCTAG
Gene >Pro_DTO377G3_2|g74.t1
ATGCGCGGTCTCGACGATAGCACTGATGTATTTATACGCACTGGCCAAAAGGCCCAGAAACATGTGCGGCTTGCT
TGGGAGGGCTTCATCAATTTTGCGGCACGGGATAACGTTCTCGAGGTTGCGTTGGGTTTGATGTGAGCTCTCCCT
ATCGCATAAAACTAACAATCAAAATGCTAACATCTCAAAAGTATAGCCAATGCGTTCACTAAAGTCGTCACATCT
TTCGTCACAGACATAATTCTGCCGATTGTCTCTCTACTGCCATTCCTGAACCGAAACATGGATCAGAAATTCGCC
GTTCTCTCCAAGGGTCCGACTTACGACCAGCAGAATGGGTATAATACCCTATATCAAGCGAGAGAAGATGGTGCA
CTGGTTCTGGCTTATGGGTATGTGGACCCACCTCAGATACTCATGGAAGGTCTCTCCCATCGATCAGTTTTATCT
CACATTTATGCAGACTGTTTGCCGAGACAGTTCTCAACTTCCTGGGTGTCAGTCTTACTCTATACGCGGTCGGAA
ATATGTACATGATGATCTTTCCCGACAAGATCATCAAGCCTACTGTCCGGTGTCCATACTGCAGGCAGTATATCA
GTAAACAGGTAAGTGGTCTGATCGGGTGTGAGTTTTACCTCGGCTAATCGTTGATTGTCCAAAGGCGCTTCGCTG
TCGCCATTGCTCAACATGGCAAGACGGAAGGGAAGACGAGCCTCGGAGTGATAAAAGCTCTCGCGAGGAACTGGC
TGGTGCCGAGCCGAGTCGTGCTGGGCAAATTTCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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