Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g7396.t1
Gene name
Location	scaffold_23:57258..59323
Strand	+
Gene length (bp)	2065
Transcript length (bp)	1692
Coding sequence length (bp)	1692
Protein length (aa)	564

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00128	Alpha-amylase	Alpha amylase, catalytic domain	1.5E-46	63	363
PF09260	A_amylase_dom_C	Alpha-amylase, domain C	2.2E-21	421	517

GO

GO Term	Description	Terminal node
GO:0016052	carbohydrate catabolic process	Yes
GO:0005509	calcium ion binding	Yes
GO:0005975	carbohydrate metabolic process	Yes
GO:0004556	alpha-amylase activity	Yes
GO:0003824	catalytic activity	No
GO:0044238	primary metabolic process	No
GO:0046872	metal ion binding	No
GO:0043167	ion binding	No
GO:0016160	amylase activity	No
GO:0008150	biological_process	No
GO:0071704	organic substance metabolic process	No
GO:0008152	metabolic process	No
GO:0005488	binding	No
GO:0009056	catabolic process	No
GO:0016798	hydrolase activity, acting on glycosyl bonds	No
GO:0003674	molecular_function	No
GO:1901575	organic substance catabolic process	No
GO:0016787	hydrolase activity	No
GO:0043169	cation binding	No
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 24	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g7396.t1 MQTPLTMWWWKVLVVAAIGTVHAASRDQWLGRSVYQVVTDRFARSDNSTIAPCVAALGEYCGGSLQGIINKLDYI QELGFDAVWISPVQSQESTRTADLSAYHGYWPNDLYSINSHFGTSDDLEALSAALHARGMYLMLDIVVGDMAWAG NASTIDYSKFNPFNDQKYFHDYKLLSEDPVNSTCVLDCWMGDTTISLPDLRNEDQEVQQMLGTWISQLVSNYSID GLRIDSVLNIPPVFFSNFTKSAGVFTMGEGATRDASGYCSLQPGLPGLLNYPLYYILTEAFNTTDGDLNRIVQSI DYVRKQCEDVLPLGTFTSNQDVARFGSYTSDISLARNILTISMLADGIPILYYGEEQHLSGGFNPVNREALWLTK YSMHSTSLPSLVQSLNRIRSYASGDGEKSTVAPKSGVDYLSYLSLPIYNSTNILAMRKGFAGNQVVSVVSNLGAK PSRKATTKITLGSDGTGFSSGQNVSELLSCKTYVTDSSGNLNVDLSSDGGPRVYYPTESLNRSSNICGDHTRTST TSAASPKASTGAGVSLFSLSWEMIVTVALTTSFVSIYL*
Coding	>Pro_DTO377G3_2\|g7396.t1 ATGCAAACGCCACTGACAATGTGGTGGTGGAAGGTTTTGGTGGTCGCCGCCATTGGGACAGTACATGCGGCATCC CGAGACCAATGGCTCGGTCGGTCCGTTTACCAAGTGGTCACCGATCGCTTCGCTCGATCCGATAATTCAACCATC GCTCCTTGTGTTGCAGCTCTGGGAGAGTATTGTGGAGGGAGCTTGCAGGGCATCATCAATAAGCTGGATTACATT CAGGAACTCGGGTTCGATGCGGTCTGGATCTCTCCAGTGCAGAGCCAGGAGTCAACTCGCACGGCGGATCTCTCA GCATACCATGGGTATTGGCCAAACGACCTTTATTCCATCAACTCCCATTTTGGCACTTCCGATGACCTCGAAGCG TTATCCGCGGCATTGCACGCGCGTGGCATGTACTTGATGCTGGATATTGTCGTTGGTGACATGGCCTGGGCTGGA AATGCCTCCACTATCGACTACAGCAAGTTCAATCCATTCAATGATCAGAAGTATTTCCACGACTACAAGCTACTT TCTGAGGACCCCGTAAACAGTACCTGTGTTCTGGATTGCTGGATGGGAGACACGACCATATCGCTTCCAGATCTG CGAAACGAGGATCAGGAAGTCCAGCAGATGCTGGGCACCTGGATTTCGCAGTTGGTTTCCAACTACTCCATTGAT GGCCTGCGAATCGACAGTGTCTTGAACATTCCCCCCGTCTTCTTCTCCAATTTCACCAAGTCGGCCGGTGTTTTT ACTATGGGCGAAGGCGCCACAAGAGACGCATCCGGTTACTGTTCTCTACAGCCCGGTCTACCCGGACTTTTGAAT TATCCGTTGTATTATATCCTCACAGAGGCTTTCAACACGACCGACGGAGACCTGAACAGAATCGTACAGTCTATA GATTACGTCAGGAAACAGTGCGAGGACGTACTGCCCCTGGGAACTTTCACATCGAATCAGGATGTCGCTCGCTTT GGCTCGTATACTTCAGACATATCGCTGGCTCGCAACATTCTCACAATCAGCATGCTCGCTGACGGTATCCCCATC CTCTACTACGGGGAGGAACAGCACCTGTCAGGTGGATTCAATCCTGTCAACCGGGAGGCCCTATGGCTTACCAAA TACTCAATGCACTCGACCTCCCTACCTTCGCTAGTCCAATCGTTGAATCGCATTAGATCATATGCAAGCGGTGAC GGAGAAAAGTCTACGGTCGCCCCGAAGTCAGGGGTCGACTATCTATCATACCTCTCATTGCCGATCTACAATTCA ACAAACATTTTGGCCATGCGCAAGGGATTTGCCGGTAACCAGGTTGTGAGCGTCGTGTCCAACCTGGGAGCCAAG CCATCCCGCAAAGCTACCACGAAAATCACGCTTGGCTCCGACGGCACAGGATTTTCATCCGGACAGAATGTGAGC GAGCTCTTGTCTTGCAAAACATATGTGACCGATTCAAGCGGAAATCTCAATGTGGACCTCAGCTCGGATGGAGGG CCTCGGGTGTATTATCCTACTGAAAGCCTGAACCGAAGCAGCAATATTTGTGGAGATCACACCCGAACATCGACA ACCTCCGCAGCAAGTCCAAAGGCTTCCACCGGCGCTGGGGTTTCGTTATTCAGCTTGTCGTGGGAGATGATAGTC ACGGTCGCATTGACCACCTCCTTCGTTTCCATCTATCTCTAG
Transcript	>Pro_DTO377G3_2\|g7396.t1 ATGCAAACGCCACTGACAATGTGGTGGTGGAAGGTTTTGGTGGTCGCCGCCATTGGGACAGTACATGCGGCATCC CGAGACCAATGGCTCGGTCGGTCCGTTTACCAAGTGGTCACCGATCGCTTCGCTCGATCCGATAATTCAACCATC GCTCCTTGTGTTGCAGCTCTGGGAGAGTATTGTGGAGGGAGCTTGCAGGGCATCATCAATAAGCTGGATTACATT CAGGAACTCGGGTTCGATGCGGTCTGGATCTCTCCAGTGCAGAGCCAGGAGTCAACTCGCACGGCGGATCTCTCA GCATACCATGGGTATTGGCCAAACGACCTTTATTCCATCAACTCCCATTTTGGCACTTCCGATGACCTCGAAGCG TTATCCGCGGCATTGCACGCGCGTGGCATGTACTTGATGCTGGATATTGTCGTTGGTGACATGGCCTGGGCTGGA AATGCCTCCACTATCGACTACAGCAAGTTCAATCCATTCAATGATCAGAAGTATTTCCACGACTACAAGCTACTT TCTGAGGACCCCGTAAACAGTACCTGTGTTCTGGATTGCTGGATGGGAGACACGACCATATCGCTTCCAGATCTG CGAAACGAGGATCAGGAAGTCCAGCAGATGCTGGGCACCTGGATTTCGCAGTTGGTTTCCAACTACTCCATTGAT GGCCTGCGAATCGACAGTGTCTTGAACATTCCCCCCGTCTTCTTCTCCAATTTCACCAAGTCGGCCGGTGTTTTT ACTATGGGCGAAGGCGCCACAAGAGACGCATCCGGTTACTGTTCTCTACAGCCCGGTCTACCCGGACTTTTGAAT TATCCGTTGTATTATATCCTCACAGAGGCTTTCAACACGACCGACGGAGACCTGAACAGAATCGTACAGTCTATA GATTACGTCAGGAAACAGTGCGAGGACGTACTGCCCCTGGGAACTTTCACATCGAATCAGGATGTCGCTCGCTTT GGCTCGTATACTTCAGACATATCGCTGGCTCGCAACATTCTCACAATCAGCATGCTCGCTGACGGTATCCCCATC CTCTACTACGGGGAGGAACAGCACCTGTCAGGTGGATTCAATCCTGTCAACCGGGAGGCCCTATGGCTTACCAAA TACTCAATGCACTCGACCTCCCTACCTTCGCTAGTCCAATCGTTGAATCGCATTAGATCATATGCAAGCGGTGAC GGAGAAAAGTCTACGGTCGCCCCGAAGTCAGGGGTCGACTATCTATCATACCTCTCATTGCCGATCTACAATTCA ACAAACATTTTGGCCATGCGCAAGGGATTTGCCGGTAACCAGGTTGTGAGCGTCGTGTCCAACCTGGGAGCCAAG CCATCCCGCAAAGCTACCACGAAAATCACGCTTGGCTCCGACGGCACAGGATTTTCATCCGGACAGAATGTGAGC GAGCTCTTGTCTTGCAAAACATATGTGACCGATTCAAGCGGAAATCTCAATGTGGACCTCAGCTCGGATGGAGGG CCTCGGGTGTATTATCCTACTGAAAGCCTGAACCGAAGCAGCAATATTTGTGGAGATCACACCCGAACATCGACA ACCTCCGCAGCAAGTCCAAAGGCTTCCACCGGCGCTGGGGTTTCGTTATTCAGCTTGTCGTGGGAGATGATAGTC ACGGTCGCATTGACCACCTCCTTCGTTTCCATCTATCTCTAG
Gene	>Pro_DTO377G3_2\|g7396.t1 ATGCAAACGCCACTGACAATGTGGTGGTGGAAGGTTTTGGTGGTCGCCGCCATTGGGACAGTACATGCGGCATCC CGAGACCAATGGCTCGGTCGGTCCGTTTACCAAGTGGTCACCGATCGCTTCGCTCGATCCGATAATTCAACCATC GCTCCTTGTGTTGCAGCTCTGGGAGAGTATTGTGGAGGGAGCTTGCAGGGCATCATCAATAAGCTGGATTACATT CAGGAACTCGGGTTCGATGCGGTCTGGATCTCTCCAGTGCAGAGCCAGGAGTCAACTCGCACGGCGGATCTCTCA GGTATGGTCATATTGCCTGTGAACGGATATAGAGAACTAACGATTGATGGATGATAGCATACCATGGGTATTGGC CAAACGACCTTTATTCCATCAACTCCCATTTTGGCACTTCCGATGACCTCGAAGCGTTATCCGCGGCATTGCACG CGCGTGGCATGGTGAGTCGCCGGCTGCCATGTCTACTCCCAAAACTGACATATAAAATAGTACTTGATGCTGGAT ATTGTCGTTGGTGACATGGCCTGGGCTGGAAATGCCTCCACTATCGACTACAGCAAGTTCAATCCATTCAATGAT CAGAAGTATTTCCACGACTACAAGCTACTTTCTGAGGACCCCGTAAACAGTACCTGTGTTCTGGATGTAAGTCTG TCATAGCATTTGTGAGAGCATTGCTAAGCCTTTATCAGTGCTGGATGGGAGACACGACCATATCGCTTCCAGATC TGCGAAACGAGGATCAGGAAGTCCAGCAGATGCTGGGCACCTGGATTTCGCAGTTGGTTTCCAACTACTCCAGTA TGTCTATGTGTCTCCTATGTCTCCAAGGAATTTAATAACAGTTATTCTTTGTAGTTGATGGCCTGCGAATCGACA GTGTCTTGAACATTCCCCCCGTCTTCTTCTCCAATTTCACCAAGTCGGCCGGTGTTTTTACTATGGGCGAAGGCG CCACAAGAGACGCATCCGGTTACTGTTCTCTACAGCCCGGTCTACCCGGACTTTTGAATTATCCGTTGTGAGTAG CTCATCAAAATGAACGGAGGGCGTGTTGACACTTTTAGGTATTATATCCTCACAGAGGCTTTCAACACGACCGAC GGAGACCTGAACAGAATCGTACAGTCTATAGATTACGTCAGGAAACAGTGCGAGGACGTACTGCCCCTGGGAACT TTCACATCGAATCAGGATGTCGCTCGCTTTGGCTCGTATACTTCAGACATATCGGTAAGTCGAGTGCATCGGGTA TTTTGTCAGCACGCATTGACTTTGTCGCTCCCGATTAGCTGGCTCGCAACATTCTCACAATCAGCATGCTCGCTG ACGGTATCCCCATCCGTATGTTGTGCCCCCTCGAACAGAAACGAAAGCCAACGATACTAATAAACGCAACACAGT CTACTACGGGGAGGAACAGCACCTGTCAGGTGGATTCAATCCTGTCAACCGGGAGGCCCTATGGCTTACCAAATA CTCAATGCACTCGACCTCCCTACCTTCGCTAGTCCAATCGTTGAATCGCATTAGATCATATGCAAGCGGTGACGG AGAAAAGTCTACGGTCGCCCCGAAGTCAGGGGTCGACTATCTATCATACCTCTCATTGCCGATCTACAATTCAAC AAACATTTTGGCCATGCGCAAGGGATTTGCCGGTAACCAGGTTGTGAGCGTCGTGTCCAACCTGGGAGCCAAGCC ATCCCGCAAAGCTACCACGAAAATCACGCTTGGCTCCGACGGCACAGGATTTTCATCCGGACAGAATGTGAGCGA GCTCTTGTCTTGCAAAACATATGTGACCGATTCAAGCGGAAATCTCAATGTGGACCTCAGCTCGGATGGAGGGCC TCGGGTGTATTATCCTACTGAAAGCCTGAACCGAAGCAGCAATATTTGTGGAGATCACACCCGAACATCGACAAC CTCCGCAGCAAGTCCAAAGGCTTCCACCGGCGCTGGGGTTTCGTTATTCAGCTTGTCGTGGGAGATGATAGTCAC GGTCGCATTGACCACCTCCTTCGTTTCCATCTATCTCTAG

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences